RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 EPDR1Q9UM22 224 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 CHEK1O14757 476 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 CRLF1O75462 422 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 NDUFV3P56181 108 aaKnown RBP4.4□□□□□ -1.71
CSDE1-202ENST00000339438 SPRNQ5BIV9 151 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 RUSC1-AS1Q66K80 236 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 CXorf67Q86X51 503 aaPredicted RBP4.4□□□□□ -1.71
CSDE1-202ENST00000339438 OR5AN1Q8NGI8 311 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 PPP1R35Q8TAP8 253 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 PTH2Q96A98 100 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 RPEQ96AT9 228 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 ZNF714Q96N38 554 aa4.4□□□□□ -1.71
CSDE1-202ENST00000339438 ANKHD1Q8IWZ3 2542 aaKnown RBP4.39□□□□□ -1.71
CSDE1-202ENST00000339438 J3QT63 122 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 TFF1P04155 84 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 SLC25A5P05141 298 aaKnown RBP4.39□□□□□ -1.71
CSDE1-202ENST00000339438 CSN1S1P47710 185 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 UBE2D3P61077 147 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 UBE2D2P62837 147 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 GNG3P63215 75 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 RASL10AQ92737 203 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 USP9YO00507 2555 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-202ENST00000339438 MEGF8Q7Z7M0 2845 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 OOEPA6NGQ2 149 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 PCBD1P61457 104 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 UBE2L3P68036 154 aaKnown RBP4.39□□□□□ -1.71
CSDE1-202ENST00000339438 KLRB1Q12918 225 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 C11orf53Q8IXP5 236 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 LRRK2Q5S007 2527 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 LINC01619G3V211 115 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 FCGR3BO75015 233 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 GRNP28799 593 aaKnown RBP4.39□□□□□ -1.71
CSDE1-202ENST00000339438 PLP2Q04941 152 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 TAL2Q16559 108 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 ANXA2RQ3ZCQ2 193 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 OR13A1Q8NGR1 328 aa4.39□□□□□ -1.71
CSDE1-202ENST00000339438 KMT2CQ8NEZ4 4911 aaKnown RBP4.38□□□□□ -1.71
CSDE1-202ENST00000339438 TENM1Q9UKZ4 2725 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 DNPH1O43598 174 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 CRIP1P50238 77 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 LOXL3P58215 753 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 C11orf71Q6IPW1 123 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.38□□□□□ -1.71
CSDE1-202ENST00000339438 ZNF414Q96IQ9 312 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 IFI27L2Q9H2X8 130 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 PLEKHA3Q9HB20 300 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 METRNQ9UJH8 293 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 IGHV3-43A0A0B4J1X8 118 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 IGHV3-43DP0DP04 118 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 ATP5J2P56134 94 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 RPL39P5Q59GN2 51 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 SLC25A48Q6ZT89 311 aaKnown RBP4.38□□□□□ -1.71
CSDE1-202ENST00000339438 IFI27L1Q96BM0 104 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 TRAV4A0A0B4J268 109 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 DEFB108AA8MXU0 73 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 P01737 135 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 HSPE1P61604 102 aaKnown RBP4.38□□□□□ -1.71
CSDE1-202ENST00000339438 FAM27E3Q08E93 113 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 MDP1Q86V88 176 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 MDFICQ9P1T7 246 aa4.38□□□□□ -1.71
CSDE1-202ENST00000339438 NSD1Q96L73 2696 aaPredicted RBP4.38□□□□□ -1.71
CSDE1-202ENST00000339438 TNCP24821 2201 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 TMEM30CPA0ZSE6 113 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 GAGE12JA6NER3 117 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 D6R8Y8 96 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 GAGE7O76087 117 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 HBDP02042 147 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 GAGE12FP0CL80 117 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 GAGE12GP0CL81 117 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 GAGE12IP0CL82 117 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 RNASE2P10153 161 aaKnown RBP4.37□□□□□ -1.71
CSDE1-202ENST00000339438 GAGE4Q13068 117 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 POU2AF1Q16633 256 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 C2orf83Q53S99 150 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 ZFAND6Q6FIF0 208 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 ZFP2Q6ZN57 461 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 TEN1Q86WV5 123 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 FMC1Q96HJ9 113 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 RAB1BQ9H0U4 201 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 YAE1D1Q9NRH1 226 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 MRPL36Q9P0J6 103 aaKnown RBP4.37□□□□□ -1.71
CSDE1-202ENST00000339438 PRNDQ9UKY0 176 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 IGHV1-2P23083 117 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 CIARTQ8N365 385 aaPredicted RBP4.37□□□□□ -1.71
CSDE1-202ENST00000339438 PRR7Q8TB68 274 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 DCTN5Q9BTE1 182 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 PAXXQ9BUH6 204 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 PROCRQ9UNN8 238 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 TIMM8BQ9Y5J9 83 aaPredicted RBP4.37□□□□□ -1.71
CSDE1-202ENST00000339438 A0A1B0GUT8 65 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 M0QXV9 152 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 M0R1B8 84 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 TCRAP04437 139 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 GP9P14770 177 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 CD69Q07108 199 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 Q6Q795 121 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 Q86TA4 180 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 LINC01587Q99440 93 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 FAM234AQ9H0X4 552 aa4.37□□□□□ -1.71
CSDE1-202ENST00000339438 POLQO75417 2590 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms