RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 HIST1H2BOP23527 126 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 HIST1H2BBP33778 126 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 HIST1H2BDP58876 126 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 HIST1H2BCP62807 126 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 HIST2H2BEQ16778 126 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.9□□□□□ -0.82
FN1-202ENST00000336916 HIST1H2BHQ93079 126 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 HIST1H2BNQ99877 126 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 HIST1H2BMQ99879 126 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 REG4Q9BYZ8 158 aa9.9□□□□□ -0.82
FN1-202ENST00000336916 ZNF479Q96JC4 524 aa9.9□□□□□ -0.83
FN1-202ENST00000336916 AZU1P20160 251 aa9.9□□□□□ -0.83
FN1-202ENST00000336916 LINC01545Q5VT33 79 aa9.89□□□□□ -0.83
FN1-202ENST00000336916 QRFPP83859 136 aa9.89□□□□□ -0.83
FN1-202ENST00000336916 PRSS46E5RG02 174 aa9.89□□□□□ -0.83
FN1-202ENST00000336916 NDPQ00604 133 aa9.89□□□□□ -0.83
FN1-202ENST00000336916 HGFACQ04756 655 aa9.89□□□□□ -0.83
FN1-202ENST00000336916 SNHG12Q9BXW3 62 aa9.89□□□□□ -0.83
FN1-202ENST00000336916 ZNF134P52741 427 aa9.89□□□□□ -0.83
FN1-202ENST00000336916 TLN2Q9Y4G6 2542 aa9.89□□□□□ -0.83
FN1-202ENST00000336916 C15orf62A8K5M9 175 aa9.89□□□□□ -0.83
FN1-202ENST00000336916 EFNA2O43921 213 aa9.89□□□□□ -0.83
FN1-202ENST00000336916 ESDP10768 282 aa9.89□□□□□ -0.83
FN1-202ENST00000336916 IL17DQ8TAD2 202 aa9.89□□□□□ -0.83
FN1-202ENST00000336916 NDUFAF3Q9BU61 184 aa9.89□□□□□ -0.83
FN1-202ENST00000336916 IGKV1-5P01602 117 aa9.88□□□□□ -0.83
FN1-202ENST00000336916 DEFB131AP59861 70 aa9.88□□□□□ -0.83
FN1-202ENST00000336916 VWC2Q2TAL6 325 aa9.88□□□□□ -0.83
FN1-202ENST00000336916 PYGO2Q9BRQ0 406 aa9.88□□□□□ -0.83
FN1-202ENST00000336916 CR1LQ2VPA4 569 aa9.88□□□□□ -0.83
FN1-202ENST00000336916 ZFAND6Q6FIF0 208 aa9.88□□□□□ -0.83
FN1-202ENST00000336916 ZNF329Q86UD4 541 aa9.88□□□□□ -0.83
FN1-202ENST00000336916 C5orf63A6NC05 138 aa9.88□□□□□ -0.83
FN1-202ENST00000336916 ATP6V0E1O15342 81 aa9.88□□□□□ -0.83
FN1-202ENST00000336916 CD300EQ496F6 205 aaPredicted RBP9.88□□□□□ -0.83
FN1-202ENST00000336916 MRPL53Q96EL3 112 aaKnown RBP9.88□□□□□ -0.83
FN1-202ENST00000336916 LINC00473A8K010 186 aa9.88□□□□□ -0.83
FN1-202ENST00000336916 DEFB130BP0DP73 79 aa9.88□□□□□ -0.83
FN1-202ENST00000336916 DEFB130AP0DP74 79 aa9.88□□□□□ -0.83
FN1-202ENST00000336916 RBAKDNA6NC62 111 aa9.87□□□□□ -0.83
FN1-202ENST00000336916 C14orf178Q8N769 122 aaPredicted RBP9.87□□□□□ -0.83
FN1-202ENST00000336916 CRLF1O75462 422 aa9.87□□□□□ -0.83
FN1-202ENST00000336916 FOXI2Q6ZQN5 318 aa9.87□□□□□ -0.83
FN1-202ENST00000336916 IGHV1OR15-1A0A075B7D0 117 aa9.87□□□□□ -0.83
FN1-202ENST00000336916 TRAV13-2A0A0B4J235 113 aa9.87□□□□□ -0.83
FN1-202ENST00000336916 IGHV2-70P01814 119 aa9.87□□□□□ -0.83
FN1-202ENST00000336916 FOXE3Q13461 319 aa9.87□□□□□ -0.83
FN1-202ENST00000336916 Q86TA4 180 aa9.87□□□□□ -0.83
FN1-202ENST00000336916 RPP25LQ8N5L8 163 aaKnown RBP9.87□□□□□ -0.83
FN1-202ENST00000336916 IGKV1-16P04430 117 aa9.87□□□□□ -0.83
FN1-202ENST00000336916 PPIFP30405 207 aaKnown RBP9.87□□□□□ -0.83
FN1-202ENST00000336916 SIGMAR1Q99720 223 aa9.87□□□□□ -0.83
FN1-202ENST00000336916 OVOL3O00110 214 aa9.87□□□□□ -0.83
FN1-202ENST00000336916 NTF4P34130 210 aa9.87□□□□□ -0.83
FN1-202ENST00000336916 HERVK_113P63121 156 aa9.86□□□□□ -0.83
FN1-202ENST00000336916 UBE2E2Q96LR5 201 aa9.86□□□□□ -0.83
FN1-202ENST00000336916 PIEZO2Q9H5I5 2752 aa9.86□□□□□ -0.83
FN1-202ENST00000336916 PRB3Q04118 309 aaPredicted RBP9.86□□□□□ -0.83
FN1-202ENST00000336916 TMEM126AQ9H061 195 aa9.86□□□□□ -0.83
FN1-202ENST00000336916 LINC00527Q9UJ94 153 aa9.86□□□□□ -0.83
FN1-202ENST00000336916 PMVKQ15126 192 aa9.86□□□□□ -0.83
FN1-202ENST00000336916 C8orf86Q6ZUL3 223 aa9.86□□□□□ -0.83
FN1-202ENST00000336916 SPANXCQ9NY87 97 aa9.86□□□□□ -0.83
FN1-202ENST00000336916 H3BUT2 72 aa9.86□□□□□ -0.83
FN1-202ENST00000336916 LYPD2Q6UXB3 125 aa9.86□□□□□ -0.83
FN1-202ENST00000336916 ZNF114Q8NC26 417 aa9.86□□□□□ -0.83
FN1-202ENST00000336916 C2orf82Q6UX34 121 aa9.86□□□□□ -0.83
FN1-202ENST00000336916 IGLV3-9A0A075B6K5 115 aa9.85□□□□□ -0.83
FN1-202ENST00000336916 RHOHQ15669 191 aa9.85□□□□□ -0.83
FN1-202ENST00000336916 GAGE2EQ4V326 116 aa9.85□□□□□ -0.83
FN1-202ENST00000336916 GAGE2DQ9UEU5 116 aa9.85□□□□□ -0.83
FN1-202ENST00000336916 SELLP14151 372 aa9.85□□□□□ -0.83
FN1-202ENST00000336916 DSCR8Q96T75 97 aa9.85□□□□□ -0.83
FN1-202ENST00000336916 IGHV3-73A0A0B4J1V6 119 aa9.85□□□□□ -0.83
FN1-202ENST00000336916 SYS1-DBNDD2H3BUS1 97 aa9.85□□□□□ -0.83
FN1-202ENST00000336916 IGHV2-5P01817 119 aa9.85□□□□□ -0.83
FN1-202ENST00000336916 ANKRD17O75179 2603 aaKnown RBP9.85□□□□□ -0.83
FN1-202ENST00000336916 CITED1Q99966 193 aa9.85□□□□□ -0.83
FN1-202ENST00000336916 IGHV1-24A0A0C4DH33 117 aa9.85□□□□□ -0.83
FN1-202ENST00000336916 GFI1Q99684 422 aa9.85□□□□□ -0.83
FN1-202ENST00000336916 C10orf55Q5SWW7 151 aa9.84□□□□□ -0.83
FN1-202ENST00000336916 C22orf46C9J442 243 aa9.84□□□□□ -0.83
FN1-202ENST00000336916 CCL24O00175 119 aa9.84□□□□□ -0.83
FN1-202ENST00000336916 GAGE2BQ13066 116 aa9.84□□□□□ -0.83
FN1-202ENST00000336916 GFI1BQ5VTD9 330 aa9.84□□□□□ -0.83
FN1-202ENST00000336916 IGKV1D-8A0A087WSZ0 117 aa9.84□□□□□ -0.83
FN1-202ENST00000336916 ARMS2P0C7Q2 107 aa9.84□□□□□ -0.83
FN1-202ENST00000336916 DEFB113Q30KQ7 82 aa9.84□□□□□ -0.83
FN1-202ENST00000336916 SPAG8Q99932 426 aaPredicted RBP9.84□□□□□ -0.83
FN1-202ENST00000336916 TRAV5A0A0B4J249 113 aa9.84□□□□□ -0.83
FN1-202ENST00000336916 ST6GALNAC6Q969X2 333 aa9.84□□□□□ -0.83
FN1-202ENST00000336916 C20orf78Q9BR46 151 aa9.84□□□□□ -0.83
FN1-202ENST00000336916 IGHV7-4-1A0A0J9YVY3 117 aa9.83□□□□□ -0.84
FN1-202ENST00000336916 CGB3P0DN86 165 aa9.83□□□□□ -0.84
FN1-202ENST00000336916 TRAV13-1A0A0B4J241 112 aa9.83□□□□□ -0.84
FN1-202ENST00000336916 HIST1H2BLQ99880 126 aa9.83□□□□□ -0.84
FN1-202ENST00000336916 NCOR2Q9Y618 2525 aa9.83□□□□□ -0.84
FN1-202ENST00000336916 PAX9P55771 341 aa9.83□□□□□ -0.84
FN1-202ENST00000336916 GSN-AS1Q9NRJ2 163 aa9.83□□□□□ -0.84
FN1-202ENST00000336916 H0YIZ8 118 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms