RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 SPTAN1Q13813 2472 aaKnown RBP12.84□□□□□ -0.35
TMEM39B-201ENST00000336294 RBAKDNA6NC62 111 aa12.84□□□□□ -0.35
TMEM39B-201ENST00000336294 ZNF207O43670 478 aaKnown RBP12.84□□□□□ -0.35
TMEM39B-201ENST00000336294 IGLC3P0DOY3 106 aa12.84□□□□□ -0.35
TMEM39B-201ENST00000336294 LOC102724200A0A096LPH7 203 aaPredicted RBP12.83□□□□□ -0.35
TMEM39B-201ENST00000336294 ARMS2P0C7Q2 107 aa12.83□□□□□ -0.35
TMEM39B-201ENST00000336294 BMI1P35226 326 aa12.83□□□□□ -0.35
TMEM39B-201ENST00000336294 Q8TAT8 98 aa12.83□□□□□ -0.35
TMEM39B-201ENST00000336294 IGHV3OR16-13A0A075B7E8 117 aa12.83□□□□□ -0.36
TMEM39B-201ENST00000336294 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.83□□□□□ -0.36
TMEM39B-201ENST00000336294 IGHV3-74A0A0B4J1X5 117 aa12.83□□□□□ -0.36
TMEM39B-201ENST00000336294 J3QLI3 93 aa12.83□□□□□ -0.36
TMEM39B-201ENST00000336294 SRSF1Q07955 248 aaKnown RBP eCLIP12.83□□□□□ -0.36
TMEM39B-201ENST00000336294 MRPL53Q96EL3 112 aaKnown RBP12.83□□□□□ -0.36
TMEM39B-201ENST00000336294 UBR5O95071 2799 aaPredicted RBP12.82□□□□□ -0.36
TMEM39B-201ENST00000336294 A0A096LNT2 108 aa12.82□□□□□ -0.36
TMEM39B-201ENST00000336294 IGHV3-49A0A0A0MS15 119 aa12.82□□□□□ -0.36
TMEM39B-201ENST00000336294 A1L4Q6 167 aa12.82□□□□□ -0.36
TMEM39B-201ENST00000336294 C2orf70A6NJV1 201 aa12.82□□□□□ -0.36
TMEM39B-201ENST00000336294 NDUFA4O00483 81 aa12.82□□□□□ -0.36
TMEM39B-201ENST00000336294 OR5AL1P0C617 328 aa12.82□□□□□ -0.36
TMEM39B-201ENST00000336294 RPS20P60866 119 aaKnown RBP12.82□□□□□ -0.36
TMEM39B-201ENST00000336294 BLCAPP62952 87 aa12.82□□□□□ -0.36
TMEM39B-201ENST00000336294 TRAV9-2A0A087WT02 112 aa12.81□□□□□ -0.36
TMEM39B-201ENST00000336294 CRXO43186 299 aaPredicted RBP12.81□□□□□ -0.36
TMEM39B-201ENST00000336294 PF4V1P10720 104 aa12.81□□□□□ -0.36
TMEM39B-201ENST00000336294 PRR31Q5SQ13 230 aa12.81□□□□□ -0.36
TMEM39B-201ENST00000336294 RNF182Q8N6D2 247 aa12.81□□□□□ -0.36
TMEM39B-201ENST00000336294 URB1-AS1Q96HZ7 61 aa12.81□□□□□ -0.36
TMEM39B-201ENST00000336294 TPPP3Q9BW30 176 aa12.81□□□□□ -0.36
TMEM39B-201ENST00000336294 PRAC2D3DTV9 90 aa12.81□□□□□ -0.36
TMEM39B-201ENST00000336294 SRSF2Q01130 221 aaKnown RBP12.81□□□□□ -0.36
TMEM39B-201ENST00000336294 EBLN2Q6P2I7 272 aa12.81□□□□□ -0.36
TMEM39B-201ENST00000336294 C8orf86Q6ZUL3 223 aa12.81□□□□□ -0.36
TMEM39B-201ENST00000336294 TMEM70Q9BUB7 260 aa12.81□□□□□ -0.36
TMEM39B-201ENST00000336294 SETXQ7Z333 2677 aaKnown RBP12.8□□□□□ -0.36
TMEM39B-201ENST00000336294 CSMD1Q96PZ7 3565 aa12.8□□□□□ -0.36
TMEM39B-201ENST00000336294 TMSB15BA0A087X1C1 80 aa12.8□□□□□ -0.36
TMEM39B-201ENST00000336294 GAGE1Q13065 139 aa12.8□□□□□ -0.36
TMEM39B-201ENST00000336294 COL5A1-AS1Q5SY13 56 aa12.8□□□□□ -0.36
TMEM39B-201ENST00000336294 CLEC5AQ9NY25 188 aa12.8□□□□□ -0.36
TMEM39B-201ENST00000336294 TRAV8-2A0A0B4J237 113 aa12.79□□□□□ -0.36
TMEM39B-201ENST00000336294 A0A0G2JLM5 398 aa12.79□□□□□ -0.36
TMEM39B-201ENST00000336294 IGLV1-40P01703 118 aa12.79□□□□□ -0.36
TMEM39B-201ENST00000336294 TRBV12-3P01733 135 aa12.79□□□□□ -0.36
TMEM39B-201ENST00000336294 ZNF80P51504 273 aaPredicted RBP12.79□□□□□ -0.36
TMEM39B-201ENST00000336294 HNRNPA3P51991 378 aaKnown RBP12.79□□□□□ -0.36
TMEM39B-201ENST00000336294 ERCC8Q13216 396 aa12.79□□□□□ -0.36
TMEM39B-201ENST00000336294 LYZL1Q6UWQ5 148 aa12.79□□□□□ -0.36
TMEM39B-201ENST00000336294 Q6ZS46 218 aa12.79□□□□□ -0.36
TMEM39B-201ENST00000336294 GLMPQ8WWB7 406 aa12.79□□□□□ -0.36
TMEM39B-201ENST00000336294 ZNF580Q9UK33 172 aa12.79□□□□□ -0.36
TMEM39B-201ENST00000336294 MRPS16Q9Y3D3 137 aaKnown RBP12.79□□□□□ -0.36
TMEM39B-201ENST00000336294 DEFB112Q30KQ8 113 aa12.78□□□□□ -0.36
TMEM39B-201ENST00000336294 KLK15Q9H2R5 256 aa12.78□□□□□ -0.36
TMEM39B-201ENST00000336294 HELZ2Q9BYK8 2649 aaKnown RBP12.78□□□□□ -0.36
TMEM39B-201ENST00000336294 FABP5P3A8MUU1 101 aa12.78□□□□□ -0.36
TMEM39B-201ENST00000336294 TGFAP01135 160 aa12.78□□□□□ -0.36
TMEM39B-201ENST00000336294 IGHV3-11P01762 117 aa12.78□□□□□ -0.36
TMEM39B-201ENST00000336294 LOXL1Q08397 574 aaPredicted RBP12.78□□□□□ -0.36
TMEM39B-201ENST00000336294 Q6ZN92 141 aa12.78□□□□□ -0.36
TMEM39B-201ENST00000336294 ZNF493Q6ZR52 646 aa12.78□□□□□ -0.36
TMEM39B-201ENST00000336294 OR4X2Q8NGF9 303 aa12.78□□□□□ -0.36
TMEM39B-201ENST00000336294 IGHV1-24A0A0C4DH33 117 aa12.77□□□□□ -0.37
TMEM39B-201ENST00000336294 LINC00614P0C842 121 aa12.77□□□□□ -0.37
TMEM39B-201ENST00000336294 CFHR3Q02985 330 aa12.77□□□□□ -0.37
TMEM39B-201ENST00000336294 UNQ9165/PRO28630Q6UXU0 137 aa12.77□□□□□ -0.37
TMEM39B-201ENST00000336294 C9orf139Q6ZV77 190 aa12.77□□□□□ -0.37
TMEM39B-201ENST00000336294 C16orf92Q96LL3 132 aa12.77□□□□□ -0.37
TMEM39B-201ENST00000336294 CRYBG3Q68DQ2 2970 aa12.77□□□□□ -0.37
TMEM39B-201ENST00000336294 IGHV4-59P01825 116 aa12.76□□□□□ -0.37
TMEM39B-201ENST00000336294 TMEM78Q5T7P6 136 aa12.76□□□□□ -0.37
TMEM39B-201ENST00000336294 FER1L6-AS1Q8NA97 138 aa12.76□□□□□ -0.37
TMEM39B-201ENST00000336294 LEPROTL1O95214 131 aa12.76□□□□□ -0.37
TMEM39B-201ENST00000336294 ZNF138P52744 262 aa12.76□□□□□ -0.37
TMEM39B-201ENST00000336294 IL17RELQ6ZVW7 336 aa12.76□□□□□ -0.37
TMEM39B-201ENST00000336294 NPFFR1Q9GZQ6 430 aa12.76□□□□□ -0.37
TMEM39B-201ENST00000336294 AGPAT4-IT1Q9H0P7 198 aa12.76□□□□□ -0.37
TMEM39B-201ENST00000336294 BEX4Q9NWD9 120 aaPredicted RBP12.76□□□□□ -0.37
TMEM39B-201ENST00000336294 RNF223E7ERA6 249 aa12.75□□□□□ -0.37
TMEM39B-201ENST00000336294 SMAD7O15105 426 aaKnown RBP12.75□□□□□ -0.37
TMEM39B-201ENST00000336294 DLEU1O43261 78 aa12.75□□□□□ -0.37
TMEM39B-201ENST00000336294 ORM1P02763 201 aa12.75□□□□□ -0.37
TMEM39B-201ENST00000336294 IGLC6P0CF74 106 aa12.75□□□□□ -0.37
TMEM39B-201ENST00000336294 ZNF25P17030 456 aaPredicted RBP12.75□□□□□ -0.37
TMEM39B-201ENST00000336294 ST20Q9HBF5 79 aa12.75□□□□□ -0.37
TMEM39B-201ENST00000336294 HSPB8Q9UJY1 196 aa12.75□□□□□ -0.37
TMEM39B-201ENST00000336294 LAMTOR2Q9Y2Q5 125 aa12.75□□□□□ -0.37
TMEM39B-201ENST00000336294 SYS1-DBNDD2H3BUS1 97 aa12.74□□□□□ -0.37
TMEM39B-201ENST00000336294 LINC01559Q495D7 138 aa12.74□□□□□ -0.37
TMEM39B-201ENST00000336294 PET117Q6UWS5 81 aa12.74□□□□□ -0.37
TMEM39B-201ENST00000336294 C9orf47Q6ZRZ4 202 aa12.74□□□□□ -0.37
TMEM39B-201ENST00000336294 MAPK1IP1LQ8NDC0 245 aa12.74□□□□□ -0.37
TMEM39B-201ENST00000336294 TMEM191AQ9H0A3 160 aa12.74□□□□□ -0.37
TMEM39B-201ENST00000336294 SVEP1Q4LDE5 3571 aa12.74□□□□□ -0.37
TMEM39B-201ENST00000336294 TMEM213A2RRL7 107 aa12.74□□□□□ -0.37
TMEM39B-201ENST00000336294 M0QZ24 198 aa12.74□□□□□ -0.37
TMEM39B-201ENST00000336294 TSPOP30536 169 aa12.74□□□□□ -0.37
TMEM39B-201ENST00000336294 ZNF124Q15973 351 aa12.74□□□□□ -0.37
TMEM39B-201ENST00000336294 PPP1R14DQ9NXH3 145 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms