RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 SLC25A16P16260 332 aa8.5□□□□□ -1.05
SPTBN1-201ENST00000333896 PEBP1P30086 187 aaKnown RBP8.5□□□□□ -1.05
SPTBN1-201ENST00000333896 LIME1Q9H400 295 aa8.5□□□□□ -1.05
SPTBN1-201ENST00000333896 CENPVL1A0A0U1RR11 272 aa8.49□□□□□ -1.05
SPTBN1-201ENST00000333896 CCL4P13236 92 aa8.49□□□□□ -1.05
SPTBN1-201ENST00000333896 COL5A1P20908 1838 aaPredicted RBP8.49□□□□□ -1.05
SPTBN1-201ENST00000333896 CARD19Q96LW7 228 aa8.49□□□□□ -1.05
SPTBN1-201ENST00000333896 COLCA1Q6ZS62 124 aa8.49□□□□□ -1.05
SPTBN1-201ENST00000333896 RPL36AP83881 106 aaKnown RBP8.49□□□□□ -1.05
SPTBN1-201ENST00000333896 NSUN5P1Q3KNT7 163 aa8.49□□□□□ -1.05
SPTBN1-201ENST00000333896 RPL36ALQ969Q0 106 aaKnown RBP8.49□□□□□ -1.05
SPTBN1-201ENST00000333896 PCOLCEQ15113 449 aa8.49□□□□□ -1.05
SPTBN1-201ENST00000333896 SMRP1Q8NCR6 262 aa8.49□□□□□ -1.05
SPTBN1-201ENST00000333896 A0A0B4J2C4 111 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 PRSS57Q6UWY2 283 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 TRBV6-6A0A0A6YYG2 114 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 E9PQ18 207 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 ZNF561-AS1K7EIQ3 104 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 IMUPQ9GZP8 106 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 PTPRSQ13332 1948 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 V9GYV3 84 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 A0A1W2PR77 199 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 HLA-DRB4P13762 266 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 HLA-DRB4X5D2U9 266 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 PRSS46E5RG02 174 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 LDLRAD1Q5T700 205 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 EXOC3-AS1Q8N2X6 119 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 DPM3Q9P2X0 92 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 WDR90Q96KV7 1748 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 TRAV40A0A0B4J280 105 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 A4D1N5 150 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 PFN2P35080 140 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 HGFACQ04756 655 aa8.48□□□□□ -1.05
SPTBN1-201ENST00000333896 EIF4EBP2Q13542 120 aaPredicted RBP8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 SMKR1H3BMG3 65 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 VSIRQ9H7M9 311 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 A0A1B0GX51 115 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 NDUFC2-KCTD14E9PQ53 114 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 RPL35AP18077 110 aaKnown RBP8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 LYZL1Q6UWQ5 148 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 DEFB105AQ8NG35 78 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 RNF138Q8WVD3 245 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 IGFBPL1Q8WX77 278 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 LOC101059948A0A1B0GTJ6 334 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 PAQR4Q8N4S7 273 aaPredicted RBP8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 IGHV1OR15-9A0A0B4J2B8 117 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 SAP30O75446 220 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 CTSBP07858 339 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 IGFBP6P24592 240 aaPredicted RBP8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 TM4SF4P48230 202 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 NDUFC1O43677 76 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 C1QL2Q7Z5L3 287 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 ZIC4Q8N9L1 334 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 PYGO2Q9BRQ0 406 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 PLA2G2FQ9BZM2 168 aa8.47□□□□□ -1.05
SPTBN1-201ENST00000333896 RPL15P61313 204 aaKnown RBP8.46□□□□□ -1.05
SPTBN1-201ENST00000333896 IGKV1-8A0A0C4DH67 115 aa8.46□□□□□ -1.05
SPTBN1-201ENST00000333896 ZNF138P52744 262 aa8.46□□□□□ -1.05
SPTBN1-201ENST00000333896 PKIGQ9Y2B9 76 aa8.46□□□□□ -1.05
SPTBN1-201ENST00000333896 EFEMP2O95967 443 aa8.46□□□□□ -1.05
SPTBN1-201ENST00000333896 CGB3P0DN86 165 aa8.46□□□□□ -1.06
SPTBN1-201ENST00000333896 Q8N8P6 123 aa8.46□□□□□ -1.06
SPTBN1-201ENST00000333896 PRR15LQ9BU68 103 aa8.46□□□□□ -1.06
SPTBN1-201ENST00000333896 CLPSP04118 112 aa8.46□□□□□ -1.06
SPTBN1-201ENST00000333896 LY6G5BQ8NDX9 201 aa8.46□□□□□ -1.06
SPTBN1-201ENST00000333896 HS3ST6Q96QI5 342 aa8.46□□□□□ -1.06
SPTBN1-201ENST00000333896 CDPF1Q6NVV7 123 aa8.46□□□□□ -1.06
SPTBN1-201ENST00000333896 B9A039 149 aa8.46□□□□□ -1.06
SPTBN1-201ENST00000333896 K7ERJ3 54 aa8.46□□□□□ -1.06
SPTBN1-201ENST00000333896 CELA2AP08217 269 aa8.46□□□□□ -1.06
SPTBN1-201ENST00000333896 PAX8Q06710 450 aa8.46□□□□□ -1.06
SPTBN1-201ENST00000333896 IGHV1-45A0A0A0MS14 117 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 OVOL1O14753 267 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 NBR2O15453 112 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 FAM104BQ5XKR9 115 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 C14orf178Q8N769 122 aaPredicted RBP8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 LINC00527Q9UJ94 153 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 SRRM4A7MD48 611 aaKnown RBP8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 CGB7P0DN87 165 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 UBE2E1P51965 193 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 CPAMD8Q8IZJ3 1885 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 PMS2P5A8MQ11 134 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 F6UB75 175 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 C22orf46C9J442 243 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 SAA2P0DJI9 122 aaPredicted RBP8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 FAM168AQ92567 244 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 VSIG2Q96IQ7 327 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 C12orf77C9JDV5 145 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 A0A087WWL8 130 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 TMEM92Q6UXU6 159 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 ZNF329Q86UD4 541 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 LRRC75A-AS1Q8N1F1 130 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 H3BT86 120 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 C11orf52Q96A22 123 aa8.45□□□□□ -1.06
SPTBN1-201ENST00000333896 CD24P25063 80 aa8.44□□□□□ -1.06
SPTBN1-201ENST00000333896 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
SPTBN1-201ENST00000333896 A0A0A6YYD4 124 aa8.44□□□□□ -1.06
SPTBN1-201ENST00000333896 USP9XQ93008 2570 aaPredicted RBP8.44□□□□□ -1.06
SPTBN1-201ENST00000333896 UBE2BP63146 152 aa8.44□□□□□ -1.06
SPTBN1-201ENST00000333896 MRPL14Q6P1L8 145 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms