RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 SNHG12Q9BXW3 62 aa7.52□□□□□ -1.21
SS18L1-201ENST00000331758 PEF1Q9UBV8 284 aaKnown RBP7.52□□□□□ -1.21
SS18L1-201ENST00000331758 LAMA1P25391 3075 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 H3BVH4 76 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 FCN3O75636 299 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 SYNJ2BPP57105 145 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 VPS13AQ96RL7 3174 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 TRAV21A0A0B4J279 112 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 SH2D1AO60880 128 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 GAGE1Q13065 139 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 PDE6HQ13956 83 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 C9orf139Q6ZV77 190 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 IL17RELQ6ZVW7 336 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 C11orf52Q96A22 123 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 A0A1B0GW15 77 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 FABP2P12104 132 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 PSMB2P49721 201 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 YPEL4Q96NS1 127 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 PEMTQ9UBM1 199 aa7.51□□□□□ -1.21
SS18L1-201ENST00000331758 H3BRN7 92 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 J3QKU1 62 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 IGHV4-59P01825 116 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 BLCAPP62952 87 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 TTC9CQ8N5M4 171 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 MRPL27Q9P0M9 148 aaKnown RBP7.5□□□□□ -1.21
SS18L1-201ENST00000331758 I3L2K1 104 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 GCSHP23434 173 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 DEFB112Q30KQ8 113 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 ATP5L2Q7Z4Y8 100 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 Q8N9W7 124 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 RAB37Q96AX2 223 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 DAZ1Q9NQZ3 744 aaKnown RBP7.5□□□□□ -1.21
SS18L1-201ENST00000331758 TEX22C9J3V5 150 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 OVOL1O14753 267 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 NCR2O95944 276 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 NIT1Q86X76 327 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 TRAV9-2A0A087WT02 112 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 EVI2AP22794 236 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 POLR3KQ9Y2Y1 108 aaPredicted RBP7.5□□□□□ -1.21
SS18L1-201ENST00000331758 V9GYV3 84 aa7.5□□□□□ -1.21
SS18L1-201ENST00000331758 LMO4P61968 165 aa7.49□□□□□ -1.21
SS18L1-201ENST00000331758 NPBQ8NG41 125 aa7.49□□□□□ -1.21
SS18L1-201ENST00000331758 ZNF502Q8TBZ5 544 aa7.49□□□□□ -1.21
SS18L1-201ENST00000331758 DUX3Q96PT4 197 aa7.49□□□□□ -1.21
SS18L1-201ENST00000331758 K7EN84 100 aa7.49□□□□□ -1.21
SS18L1-201ENST00000331758 ARMS2P0C7Q2 107 aa7.49□□□□□ -1.21
SS18L1-201ENST00000331758 PLP1P60201 277 aa7.49□□□□□ -1.21
SS18L1-201ENST00000331758 C8orf49Q96NF6 230 aa7.49□□□□□ -1.21
SS18L1-201ENST00000331758 MGAQ8IWI9 3026 aa7.49□□□□□ -1.21
SS18L1-201ENST00000331758 NPSP0C0P6 89 aa7.49□□□□□ -1.21
SS18L1-201ENST00000331758 HLA-DMBP28068 263 aa7.49□□□□□ -1.21
SS18L1-201ENST00000331758 KLHL30-AS1Q8NEE0 82 aa7.49□□□□□ -1.21
SS18L1-201ENST00000331758 KIR2DL5BA0A0G2JN68 375 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 KIR2DL5BA0A0G2JPC4 375 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 C7orf71A4D174 169 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 SAMD13Q5VXD3 122 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 KIR2DL5AQ8N109 375 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 KIR2DL4Q99706 377 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 SIRPDQ9H106 197 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 VCANP13611 3396 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 FN1P02751 2386 aaKnown RBP7.48□□□□□ -1.21
SS18L1-201ENST00000331758 ZNF292O60281 2723 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 IGLV11-55A0A075B6I3 123 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 PAX1P15863 534 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 RRN3P1Q2M238 152 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 ORAOV1Q8WV07 137 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 LINC01587Q99440 93 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 TMEM14CQ9P0S9 112 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 NSUN5P1Q3KNT7 163 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 LY6G5BQ8NDX9 201 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 ZNF414Q96IQ9 312 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 FAM167A-AS1Q96KT0 104 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 NACAE9PAV3 2078 aa7.48□□□□□ -1.21
SS18L1-201ENST00000331758 D6R8Y8 96 aa7.47□□□□□ -1.21
SS18L1-201ENST00000331758 DYNAPQ8N1N2 210 aa7.47□□□□□ -1.21
SS18L1-201ENST00000331758 ST20Q9HBF5 79 aa7.47□□□□□ -1.21
SS18L1-201ENST00000331758 TRAV12-3A0A0B4J271 114 aa7.47□□□□□ -1.21
SS18L1-201ENST00000331758 F2Z2F3 143 aa7.47□□□□□ -1.21
SS18L1-201ENST00000331758 C8orf86Q6ZUL3 223 aa7.47□□□□□ -1.21
SS18L1-201ENST00000331758 AMN1Q8IY45 258 aa7.47□□□□□ -1.21
SS18L1-201ENST00000331758 CHCHD1Q96BP2 118 aaKnown RBP7.47□□□□□ -1.21
SS18L1-201ENST00000331758 MCRIP2Q9BUT9 160 aaKnown RBP7.47□□□□□ -1.21
SS18L1-201ENST00000331758 DNAH14Q0VDD8 3507 aa7.47□□□□□ -1.21
SS18L1-201ENST00000331758 HOXA3O43365 443 aaPredicted RBP7.47□□□□□ -1.21
SS18L1-201ENST00000331758 FXYD7P58549 80 aa7.47□□□□□ -1.21
SS18L1-201ENST00000331758 SMAGPQ0VAQ4 97 aa7.47□□□□□ -1.21
SS18L1-201ENST00000331758 TEX43Q6ZNM6 134 aa7.47□□□□□ -1.21
SS18L1-201ENST00000331758 Q6ZVH6 145 aa7.47□□□□□ -1.21
SS18L1-201ENST00000331758 ZNF256Q9Y2P7 627 aaPredicted RBP7.47□□□□□ -1.21
SS18L1-201ENST00000331758 TNRC6BQ9UPQ9 1833 aaKnown RBP7.47□□□□□ -1.21
SS18L1-201ENST00000331758 CTSGP08311 255 aa7.46□□□□□ -1.21
SS18L1-201ENST00000331758 DEFB104AQ8WTQ1 72 aa7.46□□□□□ -1.21
SS18L1-201ENST00000331758 MRPS16Q9Y3D3 137 aaKnown RBP7.46□□□□□ -1.21
SS18L1-201ENST00000331758 DUSP14O95147 198 aaKnown RBP7.46□□□□□ -1.21
SS18L1-201ENST00000331758 LINC00477Q96M19 166 aa7.46□□□□□ -1.21
SS18L1-201ENST00000331758 PRR25Q96S07 402 aa7.46□□□□□ -1.21
SS18L1-201ENST00000331758 VGLL1Q99990 258 aa7.46□□□□□ -1.21
SS18L1-201ENST00000331758 TMEM213A2RRL7 107 aa7.46□□□□□ -1.22
SS18L1-201ENST00000331758 INS-IGF2F8WCM5 200 aa7.46□□□□□ -1.22
SS18L1-201ENST00000331758 SMKR1H3BMG3 65 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms