RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 NCBP2LA6PVI3 153 aaKnown RBP19.1■□□□□ 0.65
SOX1-201ENST00000330949 LINC01619G3V211 115 aa19.1■□□□□ 0.65
SOX1-201ENST00000330949 TRBV7-3A0A075B6L6 115 aa19.1■□□□□ 0.65
SOX1-201ENST00000330949 XGP55808 180 aa19.1■□□□□ 0.65
SOX1-201ENST00000330949 VCX2Q9H322 139 aa19.1■□□□□ 0.65
SOX1-201ENST00000330949 MRGPRG-AS1Q2M3A8 158 aa19.1■□□□□ 0.65
SOX1-201ENST00000330949 OTOGLQ3ZCN5 2332 aa19.09■□□□□ 0.65
SOX1-201ENST00000330949 M0R3E3 92 aa19.09■□□□□ 0.65
SOX1-201ENST00000330949 DIAPH2-AS1Q14236 149 aa19.09■□□□□ 0.65
SOX1-201ENST00000330949 MRPL35Q9NZE8 188 aaKnown RBP19.09■□□□□ 0.65
SOX1-201ENST00000330949 HOXA3O43365 443 aaPredicted RBP19.08■□□□□ 0.65
SOX1-201ENST00000330949 APELAP0DMC3 54 aa19.08■□□□□ 0.65
SOX1-201ENST00000330949 DEFB109BQ30KR1 87 aa19.08■□□□□ 0.65
SOX1-201ENST00000330949 NFE4Q86UQ8 179 aa19.08■□□□□ 0.65
SOX1-201ENST00000330949 FAM169BQ8N8A8 192 aa19.08■□□□□ 0.65
SOX1-201ENST00000330949 ABCA1O95477 2261 aa19.08■□□□□ 0.64
SOX1-201ENST00000330949 TNFRSF6BO95407 300 aa19.08■□□□□ 0.64
SOX1-201ENST00000330949 RPEQ96AT9 228 aa19.08■□□□□ 0.64
SOX1-201ENST00000330949 RNF185Q96GF1 192 aa19.08■□□□□ 0.64
SOX1-201ENST00000330949 BSNQ9UPA5 3926 aa19.08■□□□□ 0.64
SOX1-201ENST00000330949 ZFHX2Q9C0A1 2572 aaPredicted RBP19.07■□□□□ 0.64
SOX1-201ENST00000330949 H3BRN7 92 aa19.07■□□□□ 0.64
SOX1-201ENST00000330949 RBP4P02753 201 aa19.07■□□□□ 0.64
SOX1-201ENST00000330949 IL4P05112 153 aa19.07■□□□□ 0.64
SOX1-201ENST00000330949 PRB4P10163 310 aaPredicted RBP19.07■□□□□ 0.64
SOX1-201ENST00000330949 ANAPC13Q9BS18 74 aa19.07■□□□□ 0.64
SOX1-201ENST00000330949 AAMDCQ9H7C9 122 aa19.07■□□□□ 0.64
SOX1-201ENST00000330949 SMCPP49901 116 aaPredicted RBP19.07■□□□□ 0.64
SOX1-201ENST00000330949 MORN3Q6PF18 240 aaPredicted RBP19.07■□□□□ 0.64
SOX1-201ENST00000330949 DEFB124Q8NES8 71 aa19.07■□□□□ 0.64
SOX1-201ENST00000330949 CEACAM4O75871 244 aa19.06■□□□□ 0.64
SOX1-201ENST00000330949 PGPEP1Q9NXJ5 209 aa19.06■□□□□ 0.64
SOX1-201ENST00000330949 SS18L2Q9UHA2 77 aa19.06■□□□□ 0.64
SOX1-201ENST00000330949 IGLC6P0CF74 106 aa19.06■□□□□ 0.64
SOX1-201ENST00000330949 CCL3L1P16619 93 aa19.06■□□□□ 0.64
SOX1-201ENST00000330949 GATA3P23771 443 aa19.06■□□□□ 0.64
SOX1-201ENST00000330949 GAGE5Q13069 117 aa19.06■□□□□ 0.64
SOX1-201ENST00000330949 GAGE6Q13070 117 aa19.06■□□□□ 0.64
SOX1-201ENST00000330949 FHL3Q13643 280 aa19.06■□□□□ 0.64
SOX1-201ENST00000330949 COX8CQ7Z4L0 72 aa19.06■□□□□ 0.64
SOX1-201ENST00000330949 PROCRQ9UNN8 238 aa19.06■□□□□ 0.64
SOX1-201ENST00000330949 PLNP26678 52 aa19.05■□□□□ 0.64
SOX1-201ENST00000330949 MYOZ3Q8TDC0 251 aa19.05■□□□□ 0.64
SOX1-201ENST00000330949 PPDPFLQ8WWR9 84 aa19.05■□□□□ 0.64
SOX1-201ENST00000330949 TNFAIP6P98066 277 aaPredicted RBP19.05■□□□□ 0.64
SOX1-201ENST00000330949 ACACAQ13085 2346 aa19.04■□□□□ 0.64
SOX1-201ENST00000330949 EGR2P11161 476 aaPredicted RBP19.04■□□□□ 0.64
SOX1-201ENST00000330949 GLRXP35754 106 aa19.04■□□□□ 0.64
SOX1-201ENST00000330949 Q8N8P6 123 aa19.04■□□□□ 0.64
SOX1-201ENST00000330949 RALYQ9UKM9 306 aaKnown RBP19.04■□□□□ 0.64
SOX1-201ENST00000330949 PDE6HQ13956 83 aa19.04■□□□□ 0.64
SOX1-201ENST00000330949 LINC00311Q8N616 119 aa19.04■□□□□ 0.64
SOX1-201ENST00000330949 GLMPQ8WWB7 406 aa19.04■□□□□ 0.64
SOX1-201ENST00000330949 ENSAO43768 121 aaKnown RBP19.03■□□□□ 0.64
SOX1-201ENST00000330949 RELNP78509 3460 aa19.03■□□□□ 0.64
SOX1-201ENST00000330949 IGHG3P01860 377 aa19.03■□□□□ 0.64
SOX1-201ENST00000330949 ANKRD11Q6UB99 2663 aaPredicted RBP19.03■□□□□ 0.64
SOX1-201ENST00000330949 A0A087WX48 190 aa19.02■□□□□ 0.64
SOX1-201ENST00000330949 IGKV1-17P01599 117 aa19.02■□□□□ 0.64
SOX1-201ENST00000330949 C8orf31Q8N9H6 132 aa19.02■□□□□ 0.64
SOX1-201ENST00000330949 SLC25A15Q9Y619 301 aa19.02■□□□□ 0.64
SOX1-201ENST00000330949 CSMD1Q96PZ7 3565 aa19.02■□□□□ 0.64
SOX1-201ENST00000330949 CNFNQ9BYD5 112 aa19.02■□□□□ 0.64
SOX1-201ENST00000330949 IGLV3-9A0A075B6K5 115 aa19.01■□□□□ 0.63
SOX1-201ENST00000330949 MRPS12O15235 138 aaKnown RBP19.01■□□□□ 0.63
SOX1-201ENST00000330949 TEX36Q5VZQ5 186 aa19.01■□□□□ 0.63
SOX1-201ENST00000330949 MYMXA0A1B0GTQ4 84 aa19.01■□□□□ 0.63
SOX1-201ENST00000330949 GAS8-AS1O95177 125 aa19.01■□□□□ 0.63
SOX1-201ENST00000330949 MSRB1Q9NZV6 116 aa19.01■□□□□ 0.63
SOX1-201ENST00000330949 TEN1Q86WV5 123 aa19.01■□□□□ 0.63
SOX1-201ENST00000330949 I3L2K1 104 aa19■□□□□ 0.63
SOX1-201ENST00000330949 LYRM7Q5U5X0 104 aa19■□□□□ 0.63
SOX1-201ENST00000330949 ZFAND6Q6FIF0 208 aa19■□□□□ 0.63
SOX1-201ENST00000330949 PRR25Q96S07 402 aa19■□□□□ 0.63
SOX1-201ENST00000330949 SEM1Q6ZVN7 128 aa19■□□□□ 0.63
SOX1-201ENST00000330949 PTPRZ1P23471 2315 aaPredicted RBP18.99■□□□□ 0.63
SOX1-201ENST00000330949 TMEM200BQ69YZ2 307 aa18.99■□□□□ 0.63
SOX1-201ENST00000330949 C22orf34Q6ZV56 151 aa18.99■□□□□ 0.63
SOX1-201ENST00000330949 TRAV17A0A0B4J275 112 aa18.99■□□□□ 0.63
SOX1-201ENST00000330949 IGHV1-46P01743 117 aa18.99■□□□□ 0.63
SOX1-201ENST00000330949 PSMB2P49721 201 aa18.98■□□□□ 0.63
SOX1-201ENST00000330949 RNF125Q96EQ8 232 aa18.98■□□□□ 0.63
SOX1-201ENST00000330949 PRSS29PA6NIE9 313 aa18.98■□□□□ 0.63
SOX1-201ENST00000330949 NDUFA3O95167 84 aa18.98■□□□□ 0.63
SOX1-201ENST00000330949 SRSF2Q01130 221 aaKnown RBP18.98■□□□□ 0.63
SOX1-201ENST00000330949 IGLV2-18A0A075B6J9 118 aa18.97■□□□□ 0.63
SOX1-201ENST00000330949 TEX29Q8N6K0 151 aa18.97■□□□□ 0.63
SOX1-201ENST00000330949 CD40P25942 277 aa18.97■□□□□ 0.63
SOX1-201ENST00000330949 ZNF491Q8N8L2 437 aa18.97■□□□□ 0.63
SOX1-201ENST00000330949 IGHV3-72A0A0B4J1Y9 119 aa18.96■□□□□ 0.63
SOX1-201ENST00000330949 TEX22C9J3V5 150 aa18.96■□□□□ 0.63
SOX1-201ENST00000330949 LAGE3Q14657 143 aa18.96■□□□□ 0.63
SOX1-201ENST00000330949 ZNF474Q6S9Z5 364 aaPredicted RBP18.96■□□□□ 0.63
SOX1-201ENST00000330949 SIGLEC9Q9Y336 463 aa18.96■□□□□ 0.63
SOX1-201ENST00000330949 ZNF292O60281 2723 aa18.96■□□□□ 0.63
SOX1-201ENST00000330949 LOC107984156A0A0G2JMH3 177 aa18.96■□□□□ 0.63
SOX1-201ENST00000330949 TMEM262E9PQX1 116 aa18.96■□□□□ 0.63
SOX1-201ENST00000330949 ARL17AQ8IVW1 177 aa18.96■□□□□ 0.63
SOX1-201ENST00000330949 CARD19Q96LW7 228 aa18.96■□□□□ 0.63
SOX1-201ENST00000330949 ZGRF1Q86YA3 2104 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms