RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 TNFAIP6P98066 277 aaPredicted RBP14.3□□□□□ -0.12
SOCS3-201ENST00000330871 TAL2Q16559 108 aa14.3□□□□□ -0.12
SOCS3-201ENST00000330871 FDCSPQ8NFU4 85 aa14.3□□□□□ -0.12
SOCS3-201ENST00000330871 TRBV6-1A0A0K0K1D8 114 aa14.29□□□□□ -0.12
SOCS3-201ENST00000330871 HERV-K104P63124 156 aa14.29□□□□□ -0.12
SOCS3-201ENST00000330871 NGBQ9NPG2 151 aa14.29□□□□□ -0.12
SOCS3-201ENST00000330871 ATP6V0E2Q8NHE4 81 aa14.29□□□□□ -0.12
SOCS3-201ENST00000330871 DLX4Q92988 240 aaPredicted RBP14.29□□□□□ -0.12
SOCS3-201ENST00000330871 KIR2DL4Q99706 377 aa14.29□□□□□ -0.12
SOCS3-201ENST00000330871 PSMG4Q5JS54 123 aa14.28□□□□□ -0.12
SOCS3-201ENST00000330871 RNF185Q96GF1 192 aa14.28□□□□□ -0.12
SOCS3-201ENST00000330871 TMEM14CQ9P0S9 112 aa14.28□□□□□ -0.12
SOCS3-201ENST00000330871 GPR179Q6PRD1 2367 aa14.28□□□□□ -0.12
SOCS3-201ENST00000330871 ENSAO43768 121 aaKnown RBP14.28□□□□□ -0.12
SOCS3-201ENST00000330871 TNFRSF6BO95407 300 aa14.28□□□□□ -0.12
SOCS3-201ENST00000330871 IL4P05112 153 aa14.28□□□□□ -0.12
SOCS3-201ENST00000330871 EGR2P11161 476 aaPredicted RBP14.28□□□□□ -0.12
SOCS3-201ENST00000330871 RPEQ96AT9 228 aa14.28□□□□□ -0.12
SOCS3-201ENST00000330871 TECTAO75443 2155 aa14.28□□□□□ -0.12
SOCS3-201ENST00000330871 TRAV17A0A0B4J275 112 aa14.28□□□□□ -0.12
SOCS3-201ENST00000330871 LINC01549A6NIU2 74 aa14.28□□□□□ -0.12
SOCS3-201ENST00000330871 TNFRSF13BO14836 293 aaPredicted RBP14.28□□□□□ -0.12
SOCS3-201ENST00000330871 TGFAP01135 160 aa14.28□□□□□ -0.12
SOCS3-201ENST00000330871 IGHV1-46P01743 117 aa14.27□□□□□ -0.12
SOCS3-201ENST00000330871 CDX4O14627 284 aaPredicted RBP14.27□□□□□ -0.13
SOCS3-201ENST00000330871 ATP5LO75964 103 aa14.27□□□□□ -0.13
SOCS3-201ENST00000330871 MRGPRG-AS1Q2M3A8 158 aa14.27□□□□□ -0.13
SOCS3-201ENST00000330871 ZFAND6Q6FIF0 208 aa14.27□□□□□ -0.13
SOCS3-201ENST00000330871 SVEP1Q4LDE5 3571 aa14.26□□□□□ -0.13
SOCS3-201ENST00000330871 NCBP2LA6PVI3 153 aaKnown RBP14.26□□□□□ -0.13
SOCS3-201ENST00000330871 CNIH1O95406 144 aa14.26□□□□□ -0.13
SOCS3-201ENST00000330871 ADGRG4Q8IZF6 3080 aa14.26□□□□□ -0.13
SOCS3-201ENST00000330871 TRBV7-9A0A0J9YWB2 115 aa14.26□□□□□ -0.13
SOCS3-201ENST00000330871 IGKV2-40A0A087WW87 121 aaPredicted RBP14.25□□□□□ -0.13
SOCS3-201ENST00000330871 IGKV2D-40P01614 121 aaPredicted RBP14.25□□□□□ -0.13
SOCS3-201ENST00000330871 SEM1Q6ZVN7 128 aa14.25□□□□□ -0.13
SOCS3-201ENST00000330871 TEX29Q8N6K0 151 aa14.25□□□□□ -0.13
SOCS3-201ENST00000330871 Q8TAT8 98 aa14.25□□□□□ -0.13
SOCS3-201ENST00000330871 NHLRC4P0CG21 123 aaPredicted RBP14.25□□□□□ -0.13
SOCS3-201ENST00000330871 CNTFRP26992 372 aa14.25□□□□□ -0.13
SOCS3-201ENST00000330871 TEX36Q5VZQ5 186 aa14.25□□□□□ -0.13
SOCS3-201ENST00000330871 IGFL2Q6UWQ7 119 aa14.25□□□□□ -0.13
SOCS3-201ENST00000330871 SMIM20Q8N5G0 67 aa14.25□□□□□ -0.13
SOCS3-201ENST00000330871 DEFB123Q8N688 67 aa14.25□□□□□ -0.13
SOCS3-201ENST00000330871 PPDPFLQ8WWR9 84 aa14.25□□□□□ -0.13
SOCS3-201ENST00000330871 PLCE1Q9P212 2302 aa14.24□□□□□ -0.13
SOCS3-201ENST00000330871 MBD3L4A6NDZ8 208 aaPredicted RBP14.24□□□□□ -0.13
SOCS3-201ENST00000330871 MBD3L3A6NE82 208 aaPredicted RBP14.24□□□□□ -0.13
SOCS3-201ENST00000330871 MBD3L5A6NJ08 208 aaPredicted RBP14.24□□□□□ -0.13
SOCS3-201ENST00000330871 H3BVH4 76 aa14.24□□□□□ -0.13
SOCS3-201ENST00000330871 HLA-DRB4P13762 266 aa14.24□□□□□ -0.13
SOCS3-201ENST00000330871 C3orf36Q3SXR2 165 aa14.24□□□□□ -0.13
SOCS3-201ENST00000330871 VMA21Q3ZAQ7 101 aa14.24□□□□□ -0.13
SOCS3-201ENST00000330871 ZNF474Q6S9Z5 364 aaPredicted RBP14.24□□□□□ -0.13
SOCS3-201ENST00000330871 MBD3L2Q8NHZ7 208 aaPredicted RBP14.24□□□□□ -0.13
SOCS3-201ENST00000330871 RASL11BQ9BPW5 248 aa14.24□□□□□ -0.13
SOCS3-201ENST00000330871 SCNM1Q9BWG6 230 aa14.24□□□□□ -0.13
SOCS3-201ENST00000330871 CTSZQ9UBR2 303 aa14.24□□□□□ -0.13
SOCS3-201ENST00000330871 HLA-DRB4X5D2U9 266 aa14.24□□□□□ -0.13
SOCS3-201ENST00000330871 CEP250Q9BV73 2442 aa14.24□□□□□ -0.13
SOCS3-201ENST00000330871 TRBV20-1A0A075B6N2 111 aa14.24□□□□□ -0.13
SOCS3-201ENST00000330871 ZNF80P51504 273 aaPredicted RBP14.24□□□□□ -0.13
SOCS3-201ENST00000330871 NXT2Q9NPJ8 142 aaKnown RBP14.24□□□□□ -0.13
SOCS3-201ENST00000330871 EFNA4P52798 201 aa14.23□□□□□ -0.13
SOCS3-201ENST00000330871 RPL27AP46776 148 aaKnown RBP14.23□□□□□ -0.13
SOCS3-201ENST00000330871 TEN1Q86WV5 123 aa14.22□□□□□ -0.13
SOCS3-201ENST00000330871 MYOZ3Q8TDC0 251 aa14.22□□□□□ -0.13
SOCS3-201ENST00000330871 MYMXA0A1B0GTQ4 84 aa14.21□□□□□ -0.13
SOCS3-201ENST00000330871 SHANK2-AS3Q9BTD1 123 aa14.21□□□□□ -0.13
SOCS3-201ENST00000330871 CCDC179H3BU77 68 aa14.21□□□□□ -0.13
SOCS3-201ENST00000330871 IGKV1-17P01599 117 aa14.21□□□□□ -0.13
SOCS3-201ENST00000330871 LINC01546A6NGU7 62 aa14.21□□□□□ -0.14
SOCS3-201ENST00000330871 ORM1P02763 201 aa14.21□□□□□ -0.14
SOCS3-201ENST00000330871 PLA2G2CQ5R387 149 aa14.21□□□□□ -0.14
SOCS3-201ENST00000330871 Q6ZS92 163 aa14.21□□□□□ -0.14
SOCS3-201ENST00000330871 S4R3C0 116 aa14.21□□□□□ -0.14
SOCS3-201ENST00000330871 A0A087WX48 190 aa14.2□□□□□ -0.14
SOCS3-201ENST00000330871 ZNF688P0C7X2 276 aa14.2□□□□□ -0.14
SOCS3-201ENST00000330871 ZNF575Q86XF7 245 aa14.2□□□□□ -0.14
SOCS3-201ENST00000330871 LGALS1P09382 135 aaKnown RBP14.2□□□□□ -0.14
SOCS3-201ENST00000330871 TMEM200BQ69YZ2 307 aa14.2□□□□□ -0.14
SOCS3-201ENST00000330871 IGFL4Q6B9Z1 124 aa14.2□□□□□ -0.14
SOCS3-201ENST00000330871 AJUBAQ96IF1 538 aa14.2□□□□□ -0.14
SOCS3-201ENST00000330871 TPRP12270 2363 aaKnown RBP14.19□□□□□ -0.14
SOCS3-201ENST00000330871 TRAV26-2A0A0B4J265 109 aa14.19□□□□□ -0.14
SOCS3-201ENST00000330871 K7EM74 188 aa14.19□□□□□ -0.14
SOCS3-201ENST00000330871 ZZEF1O43149 2961 aa14.19□□□□□ -0.14
SOCS3-201ENST00000330871 IGLC6P0CF74 106 aa14.19□□□□□ -0.14
SOCS3-201ENST00000330871 PRB3Q04118 309 aaPredicted RBP14.19□□□□□ -0.14
SOCS3-201ENST00000330871 ZGRF1Q86YA3 2104 aa14.19□□□□□ -0.14
SOCS3-201ENST00000330871 H3BRN7 92 aa14.19□□□□□ -0.14
SOCS3-201ENST00000330871 TCL1BO95988 128 aa14.18□□□□□ -0.14
SOCS3-201ENST00000330871 THBDP07204 575 aa14.18□□□□□ -0.14
SOCS3-201ENST00000330871 RPL32P62910 135 aaKnown RBP14.18□□□□□ -0.14
SOCS3-201ENST00000330871 CCL8P80075 99 aa14.18□□□□□ -0.14
SOCS3-201ENST00000330871 ANKRD29Q8N6D5 301 aa14.18□□□□□ -0.14
SOCS3-201ENST00000330871 Q8N8P6 123 aa14.18□□□□□ -0.14
SOCS3-201ENST00000330871 PRR25Q96S07 402 aa14.18□□□□□ -0.14
SOCS3-201ENST00000330871 KLK15Q9H2R5 256 aa14.18□□□□□ -0.14
SOCS3-201ENST00000330871 AAMDCQ9H7C9 122 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms