RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 IGSF23A1L1A6 192 aa12.72□□□□□ -0.37
RAB28-202ENST00000330852 PRAC2D3DTV9 90 aa12.72□□□□□ -0.37
RAB28-202ENST00000330852 NPIPB6E9PJ23 425 aa12.72□□□□□ -0.37
RAB28-202ENST00000330852 RLN2P04090 185 aa12.72□□□□□ -0.37
RAB28-202ENST00000330852 DNAH17Q9UFH2 4485 aa12.72□□□□□ -0.37
RAB28-202ENST00000330852 TRAV5A0A0B4J249 113 aa12.71□□□□□ -0.37
RAB28-202ENST00000330852 H3BTX0 84 aa12.71□□□□□ -0.37
RAB28-202ENST00000330852 PDE6HQ13956 83 aa12.71□□□□□ -0.37
RAB28-202ENST00000330852 C1orf134Q5TEV5 83 aa12.71□□□□□ -0.37
RAB28-202ENST00000330852 GFI1BQ5VTD9 330 aa12.71□□□□□ -0.37
RAB28-202ENST00000330852 NOP10Q9NPE3 64 aaKnown RBP12.71□□□□□ -0.37
RAB28-202ENST00000330852 ZNF586Q9NXT0 402 aa12.71□□□□□ -0.37
RAB28-202ENST00000330852 HERC2O95714 4834 aa12.71□□□□□ -0.37
RAB28-202ENST00000330852 BCL2L11O43521 198 aa12.71□□□□□ -0.38
RAB28-202ENST00000330852 HIST1H1EP10412 219 aaKnown RBP12.71□□□□□ -0.38
RAB28-202ENST00000330852 FGF7P21781 194 aa12.71□□□□□ -0.38
RAB28-202ENST00000330852 CCL18P55774 89 aa12.71□□□□□ -0.38
RAB28-202ENST00000330852 EIF4E3Q8N5X7 224 aaKnown RBP12.71□□□□□ -0.38
RAB28-202ENST00000330852 LINC00612Q8N6U2 182 aa12.71□□□□□ -0.38
RAB28-202ENST00000330852 PYGO2Q9BRQ0 406 aa12.71□□□□□ -0.38
RAB28-202ENST00000330852 TRBV19A0A075B6N1 114 aa12.7□□□□□ -0.38
RAB28-202ENST00000330852 SUN5Q8TC36 379 aa12.7□□□□□ -0.38
RAB28-202ENST00000330852 NUDT3O95989 172 aa12.69□□□□□ -0.38
RAB28-202ENST00000330852 CT45A10P0DMU9 189 aa12.69□□□□□ -0.38
RAB28-202ENST00000330852 KIR3DS1Q14943 382 aa12.69□□□□□ -0.38
RAB28-202ENST00000330852 ZNF503Q96F45 646 aa12.69□□□□□ -0.38
RAB28-202ENST00000330852 NMES1Q9C002 83 aa12.69□□□□□ -0.38
RAB28-202ENST00000330852 SLC25A31Q9H0C2 315 aa12.69□□□□□ -0.38
RAB28-202ENST00000330852 FAT2Q9NYQ8 4349 aa12.69□□□□□ -0.38
RAB28-202ENST00000330852 SNURFLB1AK76 121 aa12.68□□□□□ -0.38
RAB28-202ENST00000330852 SLC25A5P05141 298 aaKnown RBP12.68□□□□□ -0.38
RAB28-202ENST00000330852 MED14OSP0DP75 135 aa12.68□□□□□ -0.38
RAB28-202ENST00000330852 PRB4P10163 310 aaPredicted RBP12.68□□□□□ -0.38
RAB28-202ENST00000330852 PHYHIPLQ96FC7 376 aa12.68□□□□□ -0.38
RAB28-202ENST00000330852 LINC00477Q96M19 166 aa12.68□□□□□ -0.38
RAB28-202ENST00000330852 MBD2Q9UBB5 411 aa12.68□□□□□ -0.38
RAB28-202ENST00000330852 E5RGE8 158 aa12.68□□□□□ -0.38
RAB28-202ENST00000330852 SCO1O75880 301 aa12.68□□□□□ -0.38
RAB28-202ENST00000330852 CYCSP99999 105 aaKnown RBP12.68□□□□□ -0.38
RAB28-202ENST00000330852 LRRC37A5PQ49AS3 106 aa12.68□□□□□ -0.38
RAB28-202ENST00000330852 NPCDR1Q9BY65 106 aa12.68□□□□□ -0.38
RAB28-202ENST00000330852 PARD6GQ9BYG4 376 aaPredicted RBP12.68□□□□□ -0.38
RAB28-202ENST00000330852 TMA7Q9Y2S6 64 aaKnown RBP12.68□□□□□ -0.38
RAB28-202ENST00000330852 TIMM9Q9Y5J7 89 aa12.68□□□□□ -0.38
RAB28-202ENST00000330852 DNAH2Q9P225 4427 aa12.68□□□□□ -0.38
RAB28-202ENST00000330852 TRAV12-3A0A0B4J271 114 aa12.67□□□□□ -0.38
RAB28-202ENST00000330852 KANTRA0A1W2PQU2 76 aa12.67□□□□□ -0.38
RAB28-202ENST00000330852 DAZ2Q13117 558 aaKnown RBP12.67□□□□□ -0.38
RAB28-202ENST00000330852 ZNRF2Q8NHG8 242 aa12.67□□□□□ -0.38
RAB28-202ENST00000330852 THAP6Q8TBB0 222 aa12.67□□□□□ -0.38
RAB28-202ENST00000330852 AAMDCQ9H7C9 122 aa12.67□□□□□ -0.38
RAB28-202ENST00000330852 KCNIP2Q9NS61 270 aa12.67□□□□□ -0.38
RAB28-202ENST00000330852 H3BNG1 76 aa12.66□□□□□ -0.38
RAB28-202ENST00000330852 RNF141Q8WVD5 230 aa12.66□□□□□ -0.38
RAB28-202ENST00000330852 NBDYA0A0U1RRE5 68 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 H0YIZ8 118 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 NDUFB4O95168 129 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 NHLH2Q02577 135 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 CLINT1Q14677 625 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 OR5C1Q8NGR4 320 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 LINC00467Q9BRT7 94 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 MUC4Q99102 2169 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 C7orf71A4D174 169 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 KLLNB2CW77 178 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 KRBOX1C9JBD0 128 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 M0R3E3 92 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 C9orf47Q6ZRZ4 202 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 STOML3Q8TAV4 291 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 RXFP4Q8TDU9 374 aa12.65□□□□□ -0.38
RAB28-202ENST00000330852 GNPNAT1Q96EK6 184 aaPredicted RBP12.65□□□□□ -0.38
RAB28-202ENST00000330852 OR5I1Q13606 314 aa12.64□□□□□ -0.39
RAB28-202ENST00000330852 FAM74A1Q5RGS3 127 aa12.64□□□□□ -0.39
RAB28-202ENST00000330852 FAM19A4Q96LR4 140 aa12.64□□□□□ -0.39
RAB28-202ENST00000330852 ARPC5LQ9BPX5 153 aa12.64□□□□□ -0.39
RAB28-202ENST00000330852 MRPL32Q9BYC8 188 aaKnown RBP12.64□□□□□ -0.39
RAB28-202ENST00000330852 LINC00588Q9Y4M8 146 aa12.64□□□□□ -0.39
RAB28-202ENST00000330852 KIAA1109Q2LD37 5005 aa12.64□□□□□ -0.39
RAB28-202ENST00000330852 GAGE12BA1L429 117 aa12.63□□□□□ -0.39
RAB28-202ENST00000330852 J3KRW8 73 aa12.63□□□□□ -0.39
RAB28-202ENST00000330852 GAGE7O76087 117 aa12.63□□□□□ -0.39
RAB28-202ENST00000330852 GAGE12FP0CL80 117 aa12.63□□□□□ -0.39
RAB28-202ENST00000330852 GAGE12GP0CL81 117 aa12.63□□□□□ -0.39
RAB28-202ENST00000330852 GAGE12IP0CL82 117 aa12.63□□□□□ -0.39
RAB28-202ENST00000330852 PYYP10082 97 aa12.63□□□□□ -0.39
RAB28-202ENST00000330852 CRISP2P16562 243 aa12.63□□□□□ -0.39
RAB28-202ENST00000330852 INO80EQ8NBZ0 244 aaPredicted RBP12.63□□□□□ -0.39
RAB28-202ENST00000330852 C18orf15Q96N68 181 aa12.63□□□□□ -0.39
RAB28-202ENST00000330852 ZNF471Q9BX82 626 aaPredicted RBP12.63□□□□□ -0.39
RAB28-202ENST00000330852 KRTAP17-1Q9BYP8 105 aa12.63□□□□□ -0.39
RAB28-202ENST00000330852 AGPAT4-IT1Q9H0P7 198 aa12.63□□□□□ -0.39
RAB28-202ENST00000330852 PKHD1P08F94 4074 aa12.63□□□□□ -0.39
RAB28-202ENST00000330852 TRAV26-1A0A087WT03 109 aa12.62□□□□□ -0.39
RAB28-202ENST00000330852 NBEAP1P0C6P0 100 aa12.62□□□□□ -0.39
RAB28-202ENST00000330852 ANXA2RQ3ZCQ2 193 aa12.62□□□□□ -0.39
RAB28-202ENST00000330852 BLNKQ8WV28 456 aa12.62□□□□□ -0.39
RAB28-202ENST00000330852 FAM167A-AS1Q96KT0 104 aa12.62□□□□□ -0.39
RAB28-202ENST00000330852 SLC25A2Q9BXI2 301 aa12.62□□□□□ -0.39
RAB28-202ENST00000330852 CYTL1Q9NRR1 136 aa12.62□□□□□ -0.39
RAB28-202ENST00000330852 ZNF324O75467 553 aaPredicted RBP12.62□□□□□ -0.39
RAB28-202ENST00000330852 GCSAMLQ5JQS6 135 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms