RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 OR4C13Q8NGP0 309 aa11.91□□□□□ -0.5
RGPD6-202ENST00000330331 NGBQ9NPG2 151 aa11.91□□□□□ -0.5
RGPD6-202ENST00000330331 TRBV20-1A0A075B6N2 111 aa11.9□□□□□ -0.5
RGPD6-202ENST00000330331 IGHV3-72A0A0B4J1Y9 119 aa11.9□□□□□ -0.5
RGPD6-202ENST00000330331 H3BVH4 76 aa11.9□□□□□ -0.5
RGPD6-202ENST00000330331 IGLV2-23P01705 113 aa11.9□□□□□ -0.5
RGPD6-202ENST00000330331 TMEM14CQ9P0S9 112 aa11.9□□□□□ -0.5
RGPD6-202ENST00000330331 CADP27708 2225 aa11.9□□□□□ -0.5
RGPD6-202ENST00000330331 CFAP47Q6ZTR5 3102 aa11.9□□□□□ -0.5
RGPD6-202ENST00000330331 NCBP2LA6PVI3 153 aaKnown RBP11.9□□□□□ -0.5
RGPD6-202ENST00000330331 ENSAO43768 121 aaKnown RBP11.9□□□□□ -0.5
RGPD6-202ENST00000330331 EGR2P11161 476 aaPredicted RBP11.9□□□□□ -0.5
RGPD6-202ENST00000330331 CCDC179H3BU77 68 aa11.89□□□□□ -0.51
RGPD6-202ENST00000330331 CCL3L1P16619 93 aa11.89□□□□□ -0.51
RGPD6-202ENST00000330331 LHBP01229 141 aa11.89□□□□□ -0.51
RGPD6-202ENST00000330331 HLA-DRB4P13762 266 aa11.89□□□□□ -0.51
RGPD6-202ENST00000330331 GAFA1Q96PS6 74 aa11.89□□□□□ -0.51
RGPD6-202ENST00000330331 HLA-DRB4X5D2U9 266 aa11.89□□□□□ -0.51
RGPD6-202ENST00000330331 PTPRZ1P23471 2315 aaPredicted RBP11.89□□□□□ -0.51
RGPD6-202ENST00000330331 TEN1Q86WV5 123 aa11.88□□□□□ -0.51
RGPD6-202ENST00000330331 FAM110AQ9BQ89 295 aa11.88□□□□□ -0.51
RGPD6-202ENST00000330331 MED13Q9UHV7 2174 aa11.88□□□□□ -0.51
RGPD6-202ENST00000330331 IGHV1-18A0A0C4DH31 117 aa11.88□□□□□ -0.51
RGPD6-202ENST00000330331 ZNF688P0C7X2 276 aa11.88□□□□□ -0.51
RGPD6-202ENST00000330331 NXT2Q9NPJ8 142 aaKnown RBP11.88□□□□□ -0.51
RGPD6-202ENST00000330331 TRGV5A0A0B4J1U4 118 aa11.87□□□□□ -0.51
RGPD6-202ENST00000330331 RPL32P62910 135 aaKnown RBP11.87□□□□□ -0.51
RGPD6-202ENST00000330331 Q6ZT83 130 aa11.87□□□□□ -0.51
RGPD6-202ENST00000330331 CTSZQ9UBR2 303 aa11.87□□□□□ -0.51
RGPD6-202ENST00000330331 LOC400499M0QZD8 3231 aa11.87□□□□□ -0.51
RGPD6-202ENST00000330331 IGKV2-40A0A087WW87 121 aaPredicted RBP11.87□□□□□ -0.51
RGPD6-202ENST00000330331 MYMXA0A1B0GTQ4 84 aa11.87□□□□□ -0.51
RGPD6-202ENST00000330331 IGKV2D-40P01614 121 aaPredicted RBP11.87□□□□□ -0.51
RGPD6-202ENST00000330331 Q6ZS92 163 aa11.87□□□□□ -0.51
RGPD6-202ENST00000330331 MYOZ3Q8TDC0 251 aa11.87□□□□□ -0.51
RGPD6-202ENST00000330331 SCNM1Q9BWG6 230 aa11.87□□□□□ -0.51
RGPD6-202ENST00000330331 EFNA4P52798 201 aa11.87□□□□□ -0.51
RGPD6-202ENST00000330331 MRGPRG-AS1Q2M3A8 158 aa11.87□□□□□ -0.51
RGPD6-202ENST00000330331 Q8TAT8 98 aa11.87□□□□□ -0.51
RGPD6-202ENST00000330331 AJUBAQ96IF1 538 aa11.87□□□□□ -0.51
RGPD6-202ENST00000330331 ZNF80P51504 273 aaPredicted RBP11.86□□□□□ -0.51
RGPD6-202ENST00000330331 VMA21Q3ZAQ7 101 aa11.86□□□□□ -0.51
RGPD6-202ENST00000330331 RASL11BQ9BPW5 248 aa11.86□□□□□ -0.51
RGPD6-202ENST00000330331 PRTN3P24158 256 aa11.86□□□□□ -0.51
RGPD6-202ENST00000330331 A0A087WX48 190 aa11.85□□□□□ -0.51
RGPD6-202ENST00000330331 TM4SF5O14894 197 aa11.85□□□□□ -0.51
RGPD6-202ENST00000330331 BRI3O95415 125 aa11.85□□□□□ -0.51
RGPD6-202ENST00000330331 CNTFRP26992 372 aa11.85□□□□□ -0.51
RGPD6-202ENST00000330331 RPL27AP46776 148 aaKnown RBP11.85□□□□□ -0.51
RGPD6-202ENST00000330331 ASCL5Q7RTU5 278 aa11.85□□□□□ -0.51
RGPD6-202ENST00000330331 ANKRD29Q8N6D5 301 aa11.85□□□□□ -0.51
RGPD6-202ENST00000330331 DCHS1Q96JQ0 3298 aa11.85□□□□□ -0.51
RGPD6-202ENST00000330331 LINC01546A6NGU7 62 aa11.85□□□□□ -0.51
RGPD6-202ENST00000330331 TCL1BO95988 128 aa11.85□□□□□ -0.51
RGPD6-202ENST00000330331 LGALS1P09382 135 aaKnown RBP11.85□□□□□ -0.51
RGPD6-202ENST00000330331 CITED1Q99966 193 aa11.85□□□□□ -0.51
RGPD6-202ENST00000330331 RAI1Q7Z5J4 1906 aaPredicted RBP11.85□□□□□ -0.51
RGPD6-202ENST00000330331 GAGE12JA6NER3 117 aa11.84□□□□□ -0.51
RGPD6-202ENST00000330331 GAGE7O76087 117 aa11.84□□□□□ -0.51
RGPD6-202ENST00000330331 ORM1P02763 201 aa11.84□□□□□ -0.51
RGPD6-202ENST00000330331 GAGE12FP0CL80 117 aa11.84□□□□□ -0.51
RGPD6-202ENST00000330331 GAGE12GP0CL81 117 aa11.84□□□□□ -0.51
RGPD6-202ENST00000330331 GAGE12IP0CL82 117 aa11.84□□□□□ -0.51
RGPD6-202ENST00000330331 GAGE4Q13068 117 aa11.84□□□□□ -0.51
RGPD6-202ENST00000330331 RNF7Q9UBF6 113 aa11.84□□□□□ -0.51
RGPD6-202ENST00000330331 SHANK2-AS3Q9BTD1 123 aa11.84□□□□□ -0.51
RGPD6-202ENST00000330331 FBXL15Q9H469 300 aa11.84□□□□□ -0.51
RGPD6-202ENST00000330331 PROCRQ9UNN8 238 aa11.84□□□□□ -0.51
RGPD6-202ENST00000330331 A8MWV9 139 aa11.83□□□□□ -0.52
RGPD6-202ENST00000330331 NDUFV3P56181 108 aaKnown RBP11.83□□□□□ -0.52
RGPD6-202ENST00000330331 Q8N8P6 123 aa11.83□□□□□ -0.52
RGPD6-202ENST00000330331 LAMA5O15230 3695 aa11.83□□□□□ -0.52
RGPD6-202ENST00000330331 AKAP13Q12802 2813 aa11.83□□□□□ -0.52
RGPD6-202ENST00000330331 TRAV4A0A0B4J268 109 aa11.83□□□□□ -0.52
RGPD6-202ENST00000330331 THBDP07204 575 aa11.83□□□□□ -0.52
RGPD6-202ENST00000330331 IGLC6P0CF74 106 aa11.83□□□□□ -0.52
RGPD6-202ENST00000330331 GAGE2BQ13066 116 aa11.83□□□□□ -0.52
RGPD6-202ENST00000330331 SRSF9Q13242 221 aaKnown RBP eCLIP11.83□□□□□ -0.52
RGPD6-202ENST00000330331 GAGE2EQ4V326 116 aa11.83□□□□□ -0.52
RGPD6-202ENST00000330331 TMEM78Q5T7P6 136 aa11.83□□□□□ -0.52
RGPD6-202ENST00000330331 KLK15Q9H2R5 256 aa11.83□□□□□ -0.52
RGPD6-202ENST00000330331 LINC00574Q9H8X3 128 aa11.83□□□□□ -0.52
RGPD6-202ENST00000330331 GAGE2DQ9UEU5 116 aa11.83□□□□□ -0.52
RGPD6-202ENST00000330331 K7EM74 188 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 CRLF1O75462 422 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 IGKV1-17P01599 117 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 IGFL4Q6B9Z1 124 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 ZNF575Q86XF7 245 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 PLEKHB2Q96CS7 222 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 S4R3C0 116 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 TRAV26-2A0A0B4J265 109 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 RHODO00212 210 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 H3BRN7 92 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 CCL11P51671 97 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 ATP1A1-AS1Q5TC04 95 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 SCGB1D4Q6XE38 83 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 DTX2Q86UW9 622 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 AAMDCQ9H7C9 122 aa11.82□□□□□ -0.52
RGPD6-202ENST00000330331 IGLV2-18A0A075B6J9 118 aa11.81□□□□□ -0.52
RGPD6-202ENST00000330331 PLNP26678 52 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms