RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ATP6V0BQ99437 205 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 U3KQK5 164 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 IGHV4-30-2A0A087WSY4 118 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 TRAV8-2A0A0B4J237 113 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 C20orf202A1L168 122 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 D6R8Y8 96 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 IGLL1P15814 213 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 Q6ZN92 141 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 AP5S1Q9NUS5 200 aa11.2□□□□□ -0.62
TPM3-206ENST00000330188 CACNA1BQ00975 2339 aa11.19□□□□□ -0.62
TPM3-206ENST00000330188 PKD1L2Q7Z442 2459 aa11.19□□□□□ -0.62
TPM3-206ENST00000330188 OR4C46A6NHA9 309 aa11.19□□□□□ -0.62
TPM3-206ENST00000330188 FABP5P3A8MUU1 101 aa11.19□□□□□ -0.62
TPM3-206ENST00000330188 TCAPO15273 167 aa11.19□□□□□ -0.62
TPM3-206ENST00000330188 TRGV3P03979 118 aa11.19□□□□□ -0.62
TPM3-206ENST00000330188 RPLP1P05386 114 aaKnown RBP11.19□□□□□ -0.62
TPM3-206ENST00000330188 ATP5J2P56134 94 aa11.19□□□□□ -0.62
TPM3-206ENST00000330188 HNRNPA3P51991 378 aaKnown RBP11.18□□□□□ -0.62
TPM3-206ENST00000330188 IL17RELQ6ZVW7 336 aa11.18□□□□□ -0.62
TPM3-206ENST00000330188 ORM1P02763 201 aa11.18□□□□□ -0.62
TPM3-206ENST00000330188 IGF1P05019 195 aa11.18□□□□□ -0.62
TPM3-206ENST00000330188 MRPL51Q4U2R6 128 aaKnown RBP11.18□□□□□ -0.62
TPM3-206ENST00000330188 C8orf86Q6ZUL3 223 aa11.18□□□□□ -0.62
TPM3-206ENST00000330188 FA2HQ7L5A8 372 aa11.18□□□□□ -0.62
TPM3-206ENST00000330188 PRSS3P2Q8NHM4 247 aa11.18□□□□□ -0.62
TPM3-206ENST00000330188 MRPL53Q96EL3 112 aaKnown RBP11.18□□□□□ -0.62
TPM3-206ENST00000330188 MAP1LC3CQ9BXW4 147 aa11.18□□□□□ -0.62
TPM3-206ENST00000330188 HSPB8Q9UJY1 196 aa11.18□□□□□ -0.62
TPM3-206ENST00000330188 IFI27P40305 119 aaPredicted RBP11.17□□□□□ -0.62
TPM3-206ENST00000330188 BATFQ16520 125 aa11.17□□□□□ -0.62
TPM3-206ENST00000330188 LY6EQ16553 131 aa11.17□□□□□ -0.62
TPM3-206ENST00000330188 LINC01559Q495D7 138 aa11.17□□□□□ -0.62
TPM3-206ENST00000330188 PRELID3AQ96N28 172 aa11.17□□□□□ -0.62
TPM3-206ENST00000330188 AGPAT4-IT1Q9H0P7 198 aa11.17□□□□□ -0.62
TPM3-206ENST00000330188 A6NDX4 124 aa11.17□□□□□ -0.62
TPM3-206ENST00000330188 TWIST1Q15672 202 aa11.17□□□□□ -0.62
TPM3-206ENST00000330188 PET117Q6UWS5 81 aa11.17□□□□□ -0.62
TPM3-206ENST00000330188 ORMDL3Q8N138 153 aa11.17□□□□□ -0.62
TPM3-206ENST00000330188 SIGLEC8Q9NYZ4 499 aa11.17□□□□□ -0.62
TPM3-206ENST00000330188 TSPOP30536 169 aa11.16□□□□□ -0.62
TPM3-206ENST00000330188 ARL3P36405 182 aa11.16□□□□□ -0.62
TPM3-206ENST00000330188 GLMPQ8WWB7 406 aa11.16□□□□□ -0.62
TPM3-206ENST00000330188 CNFNQ9BYD5 112 aa11.16□□□□□ -0.62
TPM3-206ENST00000330188 LOC389332A0A1B0GUA5 103 aa11.15□□□□□ -0.62
TPM3-206ENST00000330188 TMEM8BA6NDV4 472 aa11.15□□□□□ -0.62
TPM3-206ENST00000330188 H3BUX3 64 aa11.15□□□□□ -0.62
TPM3-206ENST00000330188 TRBV12-3P01733 135 aa11.15□□□□□ -0.62
TPM3-206ENST00000330188 IGHG2P01859 326 aa11.15□□□□□ -0.62
TPM3-206ENST00000330188 MSMBP08118 114 aa11.15□□□□□ -0.62
TPM3-206ENST00000330188 PPIFP30405 207 aaKnown RBP11.15□□□□□ -0.62
TPM3-206ENST00000330188 FAM106AQ4KMX7 169 aa11.15□□□□□ -0.62
TPM3-206ENST00000330188 OR10AG1Q8NH19 301 aa11.15□□□□□ -0.62
TPM3-206ENST00000330188 TMEM191AQ9H0A3 160 aa11.15□□□□□ -0.62
TPM3-206ENST00000330188 A0A096LNJ9 63 aa11.15□□□□□ -0.62
TPM3-206ENST00000330188 LOXL1Q08397 574 aaPredicted RBP11.15□□□□□ -0.62
TPM3-206ENST00000330188 LAMTOR2Q9Y2Q5 125 aa11.15□□□□□ -0.62
TPM3-206ENST00000330188 TIMM8BQ9Y5J9 83 aaPredicted RBP11.15□□□□□ -0.62
TPM3-206ENST00000330188 BRI3O95415 125 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 TMEM78Q5T7P6 136 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 UNQ9165/PRO28630Q6UXU0 137 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 MCRIP2Q9BUT9 160 aaKnown RBP11.14□□□□□ -0.63
TPM3-206ENST00000330188 ZNF747Q9BV97 191 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 HIF1ANQ9NWT6 349 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 MSRB1Q9NZV6 116 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 C11orf21Q9P2W6 132 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 MRPS16Q9Y3D3 137 aaKnown RBP11.14□□□□□ -0.63
TPM3-206ENST00000330188 PIEZO1Q92508 2521 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 IGKV3D-20A0A0C4DH25 116 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 hDV102S1A0JD36 115 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 SMKR1H3BMG3 65 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 H3BUA1 57 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 HIST1H1AQ02539 215 aaPredicted RBP11.14□□□□□ -0.63
TPM3-206ENST00000330188 LINC01545Q5VT33 79 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 C9orf47Q6ZRZ4 202 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 ST20Q9HBF5 79 aa11.14□□□□□ -0.63
TPM3-206ENST00000330188 H0Y8G0 127 aa11.13□□□□□ -0.63
TPM3-206ENST00000330188 NDUFA4O00483 81 aa11.13□□□□□ -0.63
TPM3-206ENST00000330188 SMAD7O15105 426 aaKnown RBP11.13□□□□□ -0.63
TPM3-206ENST00000330188 CKS2P33552 79 aa11.13□□□□□ -0.63
TPM3-206ENST00000330188 RNF185Q96GF1 192 aa11.13□□□□□ -0.63
TPM3-206ENST00000330188 C16orf92Q96LL3 132 aa11.13□□□□□ -0.63
TPM3-206ENST00000330188 CACNA1AO00555 2505 aa11.13□□□□□ -0.63
TPM3-206ENST00000330188 CELSR1Q9NYQ6 3014 aa11.12□□□□□ -0.63
TPM3-206ENST00000330188 NCR2O95944 276 aa11.12□□□□□ -0.63
TPM3-206ENST00000330188 NPYP01303 97 aa11.12□□□□□ -0.63
TPM3-206ENST00000330188 BLCAPP62952 87 aa11.12□□□□□ -0.63
TPM3-206ENST00000330188 COL5A1-AS1Q5SY13 56 aa11.12□□□□□ -0.63
TPM3-206ENST00000330188 PPP1R14DQ9NXH3 145 aa11.12□□□□□ -0.63
TPM3-206ENST00000330188 AVPP01185 164 aa11.12□□□□□ -0.63
TPM3-206ENST00000330188 G0S2P27469 103 aa11.12□□□□□ -0.63
TPM3-206ENST00000330188 Q6ZS46 218 aa11.12□□□□□ -0.63
TPM3-206ENST00000330188 C9orf139Q6ZV77 190 aa11.12□□□□□ -0.63
TPM3-206ENST00000330188 USMG5Q96IX5 58 aa11.12□□□□□ -0.63
TPM3-206ENST00000330188 C20orf173Q96LM9 149 aa11.12□□□□□ -0.63
TPM3-206ENST00000330188 KLK15Q9H2R5 256 aa11.12□□□□□ -0.63
TPM3-206ENST00000330188 IGHV3-11P01762 117 aa11.11□□□□□ -0.63
TPM3-206ENST00000330188 ZNF25P17030 456 aaPredicted RBP11.11□□□□□ -0.63
TPM3-206ENST00000330188 TFPI2P48307 235 aa11.11□□□□□ -0.63
TPM3-206ENST00000330188 GPHB5Q86YW7 130 aa11.11□□□□□ -0.63
TPM3-206ENST00000330188 STPG4Q8N801 248 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 229.8 ms