RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 EGR2P11161 476 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-201ENST00000327367 LOC285556D6RIA3 1793 aa13.18□□□□□ -0.3
SMAD3-201ENST00000327367 SIPA1L3O60292 1781 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-201ENST00000327367 ARTNQ5T4W7 220 aa13.18□□□□□ -0.3
SMAD3-201ENST00000327367 THAP8Q8NA92 274 aa13.17□□□□□ -0.3
SMAD3-201ENST00000327367 HEATR1Q9H583 2144 aaKnown RBP13.17□□□□□ -0.3
SMAD3-201ENST00000327367 CLPSP04118 112 aa13.17□□□□□ -0.3
SMAD3-201ENST00000327367 DTX1Q86Y01 620 aa13.17□□□□□ -0.3
SMAD3-201ENST00000327367 TRBV25-1A0A075B6N4 114 aa13.17□□□□□ -0.3
SMAD3-201ENST00000327367 TRBV6-6A0A0A6YYG2 114 aa13.17□□□□□ -0.3
SMAD3-201ENST00000327367 GATA1P15976 413 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-201ENST00000327367 TRAV13-2A0A0B4J235 113 aa13.17□□□□□ -0.3
SMAD3-201ENST00000327367 PRSS47A8MTI9 375 aa13.17□□□□□ -0.3
SMAD3-201ENST00000327367 KLF5Q13887 457 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-201ENST00000327367 KLHL30-AS1Q8NEE0 82 aa13.16□□□□□ -0.3
SMAD3-201ENST00000327367 FAM120AOSQ5T036 256 aa13.16□□□□□ -0.3
SMAD3-201ENST00000327367 IGKV1-39P01597 117 aa13.16□□□□□ -0.3
SMAD3-201ENST00000327367 IGKV1D-39P04432 117 aa13.16□□□□□ -0.3
SMAD3-201ENST00000327367 TAF1LQ8IZX4 1826 aa13.16□□□□□ -0.3
SMAD3-201ENST00000327367 NDUFB8O95169 186 aa13.16□□□□□ -0.3
SMAD3-201ENST00000327367 C8orf86Q6ZUL3 223 aa13.16□□□□□ -0.3
SMAD3-201ENST00000327367 Q8NFD4 153 aa13.16□□□□□ -0.3
SMAD3-201ENST00000327367 PTPRZ1P23471 2315 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-201ENST00000327367 NTN3O00634 580 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-201ENST00000327367 ZNF747Q9BV97 191 aa13.16□□□□□ -0.3
SMAD3-201ENST00000327367 FER1L5A0AVI2 2057 aa13.16□□□□□ -0.3
SMAD3-201ENST00000327367 CFHR4Q92496 578 aa13.15□□□□□ -0.3
SMAD3-201ENST00000327367 C17orf77Q96MU5 243 aa13.15□□□□□ -0.3
SMAD3-201ENST00000327367 SMIM2Q9BVW6 85 aa13.15□□□□□ -0.3
SMAD3-201ENST00000327367 PRR25Q96S07 402 aa13.15□□□□□ -0.3
SMAD3-201ENST00000327367 SPATA25Q9BR10 227 aa13.15□□□□□ -0.3
SMAD3-201ENST00000327367 CR1LQ2VPA4 569 aa13.15□□□□□ -0.31
SMAD3-201ENST00000327367 RHODO00212 210 aa13.14□□□□□ -0.31
SMAD3-201ENST00000327367 RUSC1-AS1Q66K80 236 aa13.14□□□□□ -0.31
SMAD3-201ENST00000327367 PDE6HQ13956 83 aa13.14□□□□□ -0.31
SMAD3-201ENST00000327367 ZNF493Q6ZR52 646 aa13.14□□□□□ -0.31
SMAD3-201ENST00000327367 SPANXDQ9BXN6 97 aa13.14□□□□□ -0.31
SMAD3-201ENST00000327367 TMEM14BQ9NUH8 114 aa13.14□□□□□ -0.31
SMAD3-201ENST00000327367 PTPRDP23468 1912 aa13.14□□□□□ -0.31
SMAD3-201ENST00000327367 PI4KAP42356 2102 aa13.14□□□□□ -0.31
SMAD3-201ENST00000327367 COL8A2P25067 703 aa13.14□□□□□ -0.31
SMAD3-201ENST00000327367 FOXI2Q6ZQN5 318 aa13.14□□□□□ -0.31
SMAD3-201ENST00000327367 WDR86Q86TI4 376 aa13.14□□□□□ -0.31
SMAD3-201ENST00000327367 TTTY13Q9BZ97 58 aa13.14□□□□□ -0.31
SMAD3-201ENST00000327367 COL24A1Q17RW2 1714 aa13.14□□□□□ -0.31
SMAD3-201ENST00000327367 KIAA2026Q5HYC2 2103 aa13.13□□□□□ -0.31
SMAD3-201ENST00000327367 IGLV3-12A0A075B6K2 115 aa13.13□□□□□ -0.31
SMAD3-201ENST00000327367 VWCEQ96DN2 955 aa13.13□□□□□ -0.31
SMAD3-201ENST00000327367 TPSG1Q9NRR2 321 aa13.13□□□□□ -0.31
SMAD3-201ENST00000327367 ANKRD39Q53RE8 183 aa13.13□□□□□ -0.31
SMAD3-201ENST00000327367 DUX4L9Q6RFH8 374 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-201ENST00000327367 BAALCQ8WXS3 180 aa13.13□□□□□ -0.31
SMAD3-201ENST00000327367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-201ENST00000327367 IGKV2-29A2NJV5 120 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-201ENST00000327367 FAM223BA6NKX1 122 aa13.12□□□□□ -0.31
SMAD3-201ENST00000327367 FAM223AQ8IWN6 122 aa13.12□□□□□ -0.31
SMAD3-201ENST00000327367 DAZ1Q9NQZ3 744 aaKnown RBP13.12□□□□□ -0.31
SMAD3-201ENST00000327367 ORMDL1Q9P0S3 153 aa13.12□□□□□ -0.31
SMAD3-201ENST00000327367 YLPM1P49750 1951 aaKnown RBP13.12□□□□□ -0.31
SMAD3-201ENST00000327367 ATP6V0E1O15342 81 aa13.12□□□□□ -0.31
SMAD3-201ENST00000327367 FAM231DQ6ZW35 169 aa13.12□□□□□ -0.31
SMAD3-201ENST00000327367 FXYD2P54710 66 aa13.12□□□□□ -0.31
SMAD3-201ENST00000327367 NDUFA4L2Q9NRX3 87 aa13.12□□□□□ -0.31
SMAD3-201ENST00000327367 G3V318 75 aa13.11□□□□□ -0.31
SMAD3-201ENST00000327367 F5H768 121 aa13.11□□□□□ -0.31
SMAD3-201ENST00000327367 HERV-K104P63124 156 aa13.11□□□□□ -0.31
SMAD3-201ENST00000327367 DEFB121Q5J5C9 76 aa13.11□□□□□ -0.31
SMAD3-201ENST00000327367 TAX1BP3O14907 124 aa13.11□□□□□ -0.31
SMAD3-201ENST00000327367 FXYD5Q96DB9 178 aa13.11□□□□□ -0.31
SMAD3-201ENST00000327367 Q9H8V8 135 aa13.11□□□□□ -0.31
SMAD3-201ENST00000327367 A0A0U1RQV1 116 aa13.11□□□□□ -0.31
SMAD3-201ENST00000327367 IGHV1OR15-1A0A075B7D0 117 aa13.11□□□□□ -0.31
SMAD3-201ENST00000327367 G3V4G9 280 aa13.11□□□□□ -0.31
SMAD3-201ENST00000327367 Q6ZS49 121 aa13.11□□□□□ -0.31
SMAD3-201ENST00000327367 TMEM190Q8WZ59 177 aa13.11□□□□□ -0.31
SMAD3-201ENST00000327367 ARID2Q68CP9 1835 aa13.11□□□□□ -0.31
SMAD3-201ENST00000327367 GREB1Q4ZG55 1949 aa13.1□□□□□ -0.31
SMAD3-201ENST00000327367 WNK3Q9BYP7 1800 aa13.1□□□□□ -0.31
SMAD3-201ENST00000327367 F6UB75 175 aa13.1□□□□□ -0.31
SMAD3-201ENST00000327367 MUSTN1Q8IVN3 82 aa13.1□□□□□ -0.31
SMAD3-201ENST00000327367 DAND5Q8N907 189 aa13.1□□□□□ -0.31
SMAD3-201ENST00000327367 PSMB8P28062 276 aa13.1□□□□□ -0.31
SMAD3-201ENST00000327367 RNF183Q96D59 192 aa13.1□□□□□ -0.31
SMAD3-201ENST00000327367 GNRH2O43555 120 aa13.1□□□□□ -0.31
SMAD3-201ENST00000327367 RNF5Q99942 180 aa13.1□□□□□ -0.31
SMAD3-201ENST00000327367 COLQQ9Y215 455 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-201ENST00000327367 A0A0B4J2C4 111 aa13.09□□□□□ -0.31
SMAD3-201ENST00000327367 FHL1Q13642 323 aa13.09□□□□□ -0.31
SMAD3-201ENST00000327367 POLR2AP24928 1970 aaKnown RBP13.09□□□□□ -0.31
SMAD3-201ENST00000327367 PTH2Q96A98 100 aa13.09□□□□□ -0.31
SMAD3-201ENST00000327367 SAA4P35542 130 aa13.09□□□□□ -0.31
SMAD3-201ENST00000327367 MINOS1Q5TGZ0 78 aa13.09□□□□□ -0.31
SMAD3-201ENST00000327367 ICOSQ9Y6W8 199 aa13.09□□□□□ -0.31
SMAD3-201ENST00000327367 MINOS1-NBL1R4GNA1 71 aa13.09□□□□□ -0.31
SMAD3-201ENST00000327367 XCL1P47992 114 aa13.09□□□□□ -0.31
SMAD3-201ENST00000327367 FOXI1Q12951 378 aa13.09□□□□□ -0.31
SMAD3-201ENST00000327367 SCN5AQ14524 2016 aa13.09□□□□□ -0.31
SMAD3-201ENST00000327367 CHD3Q12873 2000 aaKnown RBP13.08□□□□□ -0.31
SMAD3-201ENST00000327367 H3BRN7 92 aa13.08□□□□□ -0.31
SMAD3-201ENST00000327367 Q0VFX4 171 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms