RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 COL6A5A8TX70 2615 aa10.26□□□□□ -0.77
LIN28A-202ENST00000326279 DEFB1P60022 68 aa10.26□□□□□ -0.77
LIN28A-202ENST00000326279 FAM159AQ6UWV7 190 aa10.26□□□□□ -0.77
LIN28A-202ENST00000326279 KCNS1Q96KK3 526 aa10.26□□□□□ -0.77
LIN28A-202ENST00000326279 UBR5O95071 2799 aaPredicted RBP10.26□□□□□ -0.77
LIN28A-202ENST00000326279 AMBPP02760 352 aa10.26□□□□□ -0.77
LIN28A-202ENST00000326279 FOLR2P14207 255 aa10.26□□□□□ -0.77
LIN28A-202ENST00000326279 YPEL3P61236 119 aaPredicted RBP10.26□□□□□ -0.77
LIN28A-202ENST00000326279 FAM167A-AS1Q96KT0 104 aa10.26□□□□□ -0.77
LIN28A-202ENST00000326279 SRSF8Q9BRL6 282 aaKnown RBP10.26□□□□□ -0.77
LIN28A-202ENST00000326279 UBE2CO00762 179 aa10.26□□□□□ -0.77
LIN28A-202ENST00000326279 TMEM75Q8N9X5 138 aa10.26□□□□□ -0.77
LIN28A-202ENST00000326279 NCR2O95944 276 aa10.25□□□□□ -0.77
LIN28A-202ENST00000326279 HNRNPA3P51991 378 aaKnown RBP10.25□□□□□ -0.77
LIN28A-202ENST00000326279 Q6ZN92 141 aa10.25□□□□□ -0.77
LIN28A-202ENST00000326279 IGKV1D-37A0A075B6S9 117 aa10.25□□□□□ -0.77
LIN28A-202ENST00000326279 PSG3Q16557 428 aa10.25□□□□□ -0.77
LIN28A-202ENST00000326279 SLC50A1Q9BRV3 221 aa10.25□□□□□ -0.77
LIN28A-202ENST00000326279 MAP1LC3CQ9BXW4 147 aa10.25□□□□□ -0.77
LIN28A-202ENST00000326279 PRSS46E5RG02 174 aa10.25□□□□□ -0.77
LIN28A-202ENST00000326279 APOHP02749 345 aaPredicted RBP10.25□□□□□ -0.77
LIN28A-202ENST00000326279 CTSGP08311 255 aa10.25□□□□□ -0.77
LIN28A-202ENST00000326279 FRMD6-AS1P0C7T7 363 aa10.25□□□□□ -0.77
LIN28A-202ENST00000326279 LYZL1Q6UWQ5 148 aa10.25□□□□□ -0.77
LIN28A-202ENST00000326279 Q86TA4 180 aa10.25□□□□□ -0.77
LIN28A-202ENST00000326279 CFHR4Q92496 578 aa10.25□□□□□ -0.77
LIN28A-202ENST00000326279 FANCD2OSQ96PS1 177 aa10.25□□□□□ -0.77
LIN28A-202ENST00000326279 AP5S1Q9NUS5 200 aa10.25□□□□□ -0.77
LIN28A-202ENST00000326279 TNFRSF13BO14836 293 aaPredicted RBP10.24□□□□□ -0.77
LIN28A-202ENST00000326279 TRBV9A0A0B4J1U6 114 aa10.24□□□□□ -0.77
LIN28A-202ENST00000326279 EVI2AP22794 236 aa10.24□□□□□ -0.77
LIN28A-202ENST00000326279 PYY3Q5JQD4 70 aa10.24□□□□□ -0.77
LIN28A-202ENST00000326279 TTC9CQ8N5M4 171 aa10.24□□□□□ -0.77
LIN28A-202ENST00000326279 ZNF503Q96F45 646 aa10.24□□□□□ -0.77
LIN28A-202ENST00000326279 PSMG3-AS1Q96PY0 264 aa10.24□□□□□ -0.77
LIN28A-202ENST00000326279 IGLV11-55A0A075B6I3 123 aa10.24□□□□□ -0.77
LIN28A-202ENST00000326279 H3BVH4 76 aa10.24□□□□□ -0.77
LIN28A-202ENST00000326279 LY6G6DO95868 133 aa10.24□□□□□ -0.77
LIN28A-202ENST00000326279 NPBQ8NG41 125 aa10.24□□□□□ -0.77
LIN28A-202ENST00000326279 PRELID3AQ96N28 172 aa10.24□□□□□ -0.77
LIN28A-202ENST00000326279 VGLL1Q99990 258 aa10.24□□□□□ -0.77
LIN28A-202ENST00000326279 RNF114Q9Y508 228 aa10.24□□□□□ -0.77
LIN28A-202ENST00000326279 ODF3BA8MYP8 253 aa10.23□□□□□ -0.77
LIN28A-202ENST00000326279 SPRY2O43597 315 aa10.23□□□□□ -0.77
LIN28A-202ENST00000326279 ARMS2P0C7Q2 107 aa10.23□□□□□ -0.77
LIN28A-202ENST00000326279 SLURP1P55000 103 aa10.23□□□□□ -0.77
LIN28A-202ENST00000326279 V9GYV3 84 aa10.23□□□□□ -0.77
LIN28A-202ENST00000326279 SH2D1AO60880 128 aa10.23□□□□□ -0.77
LIN28A-202ENST00000326279 GSN-AS1Q9NRJ2 163 aa10.23□□□□□ -0.77
LIN28A-202ENST00000326279 MCRIP2Q9BUT9 160 aaKnown RBP10.23□□□□□ -0.77
LIN28A-202ENST00000326279 NRN1Q9NPD7 142 aa10.23□□□□□ -0.77
LIN28A-202ENST00000326279 F6UB75 175 aa10.23□□□□□ -0.77
LIN28A-202ENST00000326279 H3BRN7 92 aa10.23□□□□□ -0.77
LIN28A-202ENST00000326279 RPL35AP18077 110 aaKnown RBP10.23□□□□□ -0.77
LIN28A-202ENST00000326279 ACTL10Q5JWF8 245 aa10.23□□□□□ -0.77
LIN28A-202ENST00000326279 DMRTA1Q5VZB9 504 aa10.23□□□□□ -0.77
LIN28A-202ENST00000326279 SMKR1H3BMG3 65 aa10.22□□□□□ -0.77
LIN28A-202ENST00000326279 TCF21O43680 179 aa10.22□□□□□ -0.77
LIN28A-202ENST00000326279 CD7P09564 240 aa10.22□□□□□ -0.77
LIN28A-202ENST00000326279 RIPPLY3P57055 190 aa10.22□□□□□ -0.77
LIN28A-202ENST00000326279 C1orf159Q96HA4 380 aa10.22□□□□□ -0.77
LIN28A-202ENST00000326279 GNB1LQ9BYB4 327 aa10.22□□□□□ -0.77
LIN28A-202ENST00000326279 TMEM191AQ9H0A3 160 aa10.22□□□□□ -0.77
LIN28A-202ENST00000326279 DNAJC9-AS1A6NH13 148 aa10.22□□□□□ -0.77
LIN28A-202ENST00000326279 UBE2E2Q96LR5 201 aa10.22□□□□□ -0.77
LIN28A-202ENST00000326279 RPS20P60866 119 aaKnown RBP10.22□□□□□ -0.77
LIN28A-202ENST00000326279 OR1N2Q8NGR9 330 aa10.22□□□□□ -0.77
LIN28A-202ENST00000326279 LINC00587B1AMM8 73 aa10.21□□□□□ -0.77
LIN28A-202ENST00000326279 C11orf52Q96A22 123 aa10.21□□□□□ -0.77
LIN28A-202ENST00000326279 ZNF414Q96IQ9 312 aa10.21□□□□□ -0.77
LIN28A-202ENST00000326279 USMG5Q96IX5 58 aa10.21□□□□□ -0.77
LIN28A-202ENST00000326279 SNAI2O43623 268 aa10.21□□□□□ -0.78
LIN28A-202ENST00000326279 TRAV12-3A0A0B4J271 114 aa10.21□□□□□ -0.78
LIN28A-202ENST00000326279 TMEM213A2RRL7 107 aa10.21□□□□□ -0.78
LIN28A-202ENST00000326279 NDUFA3O95167 84 aa10.21□□□□□ -0.78
LIN28A-202ENST00000326279 G0S2P27469 103 aa10.21□□□□□ -0.78
LIN28A-202ENST00000326279 PKIAP61925 76 aa10.21□□□□□ -0.78
LIN28A-202ENST00000326279 TCTEX1D4Q5JR98 221 aa10.21□□□□□ -0.78
LIN28A-202ENST00000326279 ZC2HC1AQ96GY0 325 aa10.21□□□□□ -0.78
LIN28A-202ENST00000326279 C14orf144Q96I85 54 aa10.21□□□□□ -0.78
LIN28A-202ENST00000326279 AJUBAQ96IF1 538 aa10.21□□□□□ -0.78
LIN28A-202ENST00000326279 PRDM13Q9H4Q3 707 aa10.21□□□□□ -0.78
LIN28A-202ENST00000326279 DAZ1Q9NQZ3 744 aaKnown RBP10.21□□□□□ -0.78
LIN28A-202ENST00000326279 TET2Q6N021 2002 aaPredicted RBP10.21□□□□□ -0.78
LIN28A-202ENST00000326279 FAM223BA6NKX1 122 aa10.2□□□□□ -0.78
LIN28A-202ENST00000326279 GP9P14770 177 aa10.2□□□□□ -0.78
LIN28A-202ENST00000326279 FAM223AQ8IWN6 122 aa10.2□□□□□ -0.78
LIN28A-202ENST00000326279 AMN1Q8IY45 258 aa10.2□□□□□ -0.78
LIN28A-202ENST00000326279 LY96Q9Y6Y9 160 aa10.2□□□□□ -0.78
LIN28A-202ENST00000326279 DEFB131AP59861 70 aa10.2□□□□□ -0.78
LIN28A-202ENST00000326279 SLAQ13239 276 aa10.2□□□□□ -0.78
LIN28A-202ENST00000326279 NIT1Q86X76 327 aa10.2□□□□□ -0.78
LIN28A-202ENST00000326279 MAP1LC3AQ9H492 121 aa10.2□□□□□ -0.78
LIN28A-202ENST00000326279 HSPB8Q9UJY1 196 aa10.2□□□□□ -0.78
LIN28A-202ENST00000326279 LY6LH3BQJ8 138 aa10.19□□□□□ -0.78
LIN28A-202ENST00000326279 UNQ9165/PRO28630Q6UXU0 137 aa10.19□□□□□ -0.78
LIN28A-202ENST00000326279 HOXD3P31249 432 aaPredicted RBP10.19□□□□□ -0.78
LIN28A-202ENST00000326279 ASIPP42127 132 aa10.19□□□□□ -0.78
LIN28A-202ENST00000326279 ZNF56Q15929 161 aa10.19□□□□□ -0.78
LIN28A-202ENST00000326279 SPATA45Q537H7 98 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms