RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 IGHV3-49A0A0A0MS15 119 aa16.45■□□□□ 0.22
LIMS2-201ENST00000324938 H3BUX3 64 aa16.45■□□□□ 0.22
LIMS2-201ENST00000324938 M0QZK8 103 aa16.45■□□□□ 0.22
LIMS2-201ENST00000324938 IGHG2P01859 326 aa16.45■□□□□ 0.22
LIMS2-201ENST00000324938 IGLC3P0DOY3 106 aa16.45■□□□□ 0.22
LIMS2-201ENST00000324938 LY6EQ16553 131 aa16.45■□□□□ 0.22
LIMS2-201ENST00000324938 FAM104BQ5XKR9 115 aa16.45■□□□□ 0.22
LIMS2-201ENST00000324938 FABP5P3A8MUU1 101 aa16.45■□□□□ 0.22
LIMS2-201ENST00000324938 C8orf86Q6ZUL3 223 aa16.45■□□□□ 0.22
LIMS2-201ENST00000324938 ZNF575Q86XF7 245 aa16.45■□□□□ 0.22
LIMS2-201ENST00000324938 KLHDC1Q8N7A1 406 aa16.45■□□□□ 0.22
LIMS2-201ENST00000324938 PSMG3-AS1Q96PY0 264 aa16.45■□□□□ 0.22
LIMS2-201ENST00000324938 UQCR10Q9UDW1 63 aa16.45■□□□□ 0.22
LIMS2-201ENST00000324938 U3KQK5 164 aa16.45■□□□□ 0.22
LIMS2-201ENST00000324938 FLNCQ14315 2725 aa16.44■□□□□ 0.22
LIMS2-201ENST00000324938 H3BUA1 57 aa16.44■□□□□ 0.22
LIMS2-201ENST00000324938 CSN3P07498 182 aa16.44■□□□□ 0.22
LIMS2-201ENST00000324938 ARL3P36405 182 aa16.44■□□□□ 0.22
LIMS2-201ENST00000324938 NUTF2P61970 127 aaKnown RBP16.44■□□□□ 0.22
LIMS2-201ENST00000324938 USP9XQ93008 2570 aaPredicted RBP16.44■□□□□ 0.22
LIMS2-201ENST00000324938 VPS13CQ709C8 3753 aa16.44■□□□□ 0.22
LIMS2-201ENST00000324938 TRAV9-2A0A087WT02 112 aa16.43■□□□□ 0.22
LIMS2-201ENST00000324938 PPIFP30405 207 aaKnown RBP16.43■□□□□ 0.22
LIMS2-201ENST00000324938 LINC00173Q6ZV60 143 aa16.43■□□□□ 0.22
LIMS2-201ENST00000324938 C20orf202A1L168 122 aa16.43■□□□□ 0.22
LIMS2-201ENST00000324938 SYS1-DBNDD2H3BUS1 97 aa16.43■□□□□ 0.22
LIMS2-201ENST00000324938 IL17RELQ6ZVW7 336 aa16.43■□□□□ 0.22
LIMS2-201ENST00000324938 MAJINQ3KP22 176 aa16.42■□□□□ 0.22
LIMS2-201ENST00000324938 LINC01559Q495D7 138 aa16.42■□□□□ 0.22
LIMS2-201ENST00000324938 AMN1Q8IY45 258 aa16.42■□□□□ 0.22
LIMS2-201ENST00000324938 GLMPQ8WWB7 406 aa16.42■□□□□ 0.22
LIMS2-201ENST00000324938 AP5S1Q9NUS5 200 aa16.42■□□□□ 0.22
LIMS2-201ENST00000324938 HIF1ANQ9NWT6 349 aa16.42■□□□□ 0.22
LIMS2-201ENST00000324938 ZFHX3Q15911 3703 aa16.42■□□□□ 0.22
LIMS2-201ENST00000324938 D6R8Y8 96 aa16.42■□□□□ 0.22
LIMS2-201ENST00000324938 ORM1P02763 201 aa16.42■□□□□ 0.22
LIMS2-201ENST00000324938 CNFNQ9BYD5 112 aa16.42■□□□□ 0.22
LIMS2-201ENST00000324938 AGPAT4-IT1Q9H0P7 198 aa16.42■□□□□ 0.22
LIMS2-201ENST00000324938 B4DSR2 109 aa16.41■□□□□ 0.22
LIMS2-201ENST00000324938 USMG5Q96IX5 58 aa16.41■□□□□ 0.22
LIMS2-201ENST00000324938 CELSR1Q9NYQ6 3014 aa16.41■□□□□ 0.22
LIMS2-201ENST00000324938 NDUFA4O00483 81 aa16.4■□□□□ 0.22
LIMS2-201ENST00000324938 DSCR9P59020 149 aa16.4■□□□□ 0.22
LIMS2-201ENST00000324938 ORMDL3Q8N138 153 aa16.4■□□□□ 0.22
LIMS2-201ENST00000324938 MUC21A0A0G2JKD1 596 aa16.4■□□□□ 0.22
LIMS2-201ENST00000324938 MUC21A0A140T8X8 626 aa16.4■□□□□ 0.22
LIMS2-201ENST00000324938 TRBV12-3P01733 135 aa16.4■□□□□ 0.22
LIMS2-201ENST00000324938 SSTP61278 116 aa16.4■□□□□ 0.22
LIMS2-201ENST00000324938 MRPL51Q4U2R6 128 aaKnown RBP16.4■□□□□ 0.22
LIMS2-201ENST00000324938 MUC21Q5SSG8 566 aa16.4■□□□□ 0.22
LIMS2-201ENST00000324938 FA2HQ7L5A8 372 aa16.4■□□□□ 0.22
LIMS2-201ENST00000324938 PRSS3P2Q8NHM4 247 aa16.4■□□□□ 0.22
LIMS2-201ENST00000324938 HSPB8Q9UJY1 196 aa16.4■□□□□ 0.22
LIMS2-201ENST00000324938 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.4■□□□□ 0.22
LIMS2-201ENST00000324938 TWIST1Q15672 202 aa16.39■□□□□ 0.21
LIMS2-201ENST00000324938 TMEM78Q5T7P6 136 aa16.39■□□□□ 0.21
LIMS2-201ENST00000324938 C9orf47Q6ZRZ4 202 aa16.39■□□□□ 0.21
LIMS2-201ENST00000324938 PRELID3AQ96N28 172 aa16.39■□□□□ 0.21
LIMS2-201ENST00000324938 SPG11Q96JI7 2443 aa16.39■□□□□ 0.21
LIMS2-201ENST00000324938 OR4C46A6NHA9 309 aa16.39■□□□□ 0.21
LIMS2-201ENST00000324938 HIST1H1AQ02539 215 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-201ENST00000324938 MAP1LC3CQ9BXW4 147 aa16.39■□□□□ 0.21
LIMS2-201ENST00000324938 AVPP01185 164 aa16.38■□□□□ 0.21
LIMS2-201ENST00000324938 GATA3P23771 443 aa16.38■□□□□ 0.21
LIMS2-201ENST00000324938 UNQ9165/PRO28630Q6UXU0 137 aa16.38■□□□□ 0.21
LIMS2-201ENST00000324938 C9orf139Q6ZV77 190 aa16.38■□□□□ 0.21
LIMS2-201ENST00000324938 PPP1R14DQ9NXH3 145 aa16.38■□□□□ 0.21
LIMS2-201ENST00000324938 ACACBO00763 2458 aa16.38■□□□□ 0.21
LIMS2-201ENST00000324938 IGLL1P15814 213 aa16.37■□□□□ 0.21
LIMS2-201ENST00000324938 BLCAPP62952 87 aa16.37■□□□□ 0.21
LIMS2-201ENST00000324938 PET117Q6UWS5 81 aa16.37■□□□□ 0.21
LIMS2-201ENST00000324938 TMEM191AQ9H0A3 160 aa16.37■□□□□ 0.21
LIMS2-201ENST00000324938 Q6ZN92 141 aa16.37■□□□□ 0.21
LIMS2-201ENST00000324938 OR10AG1Q8NH19 301 aa16.37■□□□□ 0.21
LIMS2-201ENST00000324938 C16orf92Q96LL3 132 aa16.37■□□□□ 0.21
LIMS2-201ENST00000324938 SIGLEC8Q9NYZ4 499 aa16.37■□□□□ 0.21
LIMS2-201ENST00000324938 IFI27P40305 119 aaPredicted RBP16.36■□□□□ 0.21
LIMS2-201ENST00000324938 HNRNPA3P51991 378 aaKnown RBP16.36■□□□□ 0.21
LIMS2-201ENST00000324938 NRGNQ92686 78 aa16.36■□□□□ 0.21
LIMS2-201ENST00000324938 SMAD7O15105 426 aaKnown RBP16.36■□□□□ 0.21
LIMS2-201ENST00000324938 SLC25A16P16260 332 aa16.36■□□□□ 0.21
LIMS2-201ENST00000324938 KLK15Q9H2R5 256 aa16.36■□□□□ 0.21
LIMS2-201ENST00000324938 IGLV1-40P01703 118 aa16.35■□□□□ 0.21
LIMS2-201ENST00000324938 PF4V1P10720 104 aa16.35■□□□□ 0.21
LIMS2-201ENST00000324938 Q6ZS46 218 aa16.35■□□□□ 0.21
LIMS2-201ENST00000324938 IGKV3D-20A0A0C4DH25 116 aa16.34■□□□□ 0.21
LIMS2-201ENST00000324938 RPLP1P05386 114 aaKnown RBP16.34■□□□□ 0.21
LIMS2-201ENST00000324938 C11orf21Q9P2W6 132 aa16.34■□□□□ 0.21
LIMS2-201ENST00000324938 IGHV3-11P01762 117 aa16.34■□□□□ 0.21
LIMS2-201ENST00000324938 GPHB5Q86YW7 130 aa16.34■□□□□ 0.21
LIMS2-201ENST00000324938 ZNF747Q9BV97 191 aa16.34■□□□□ 0.21
LIMS2-201ENST00000324938 MSRB1Q9NZV6 116 aa16.34■□□□□ 0.21
LIMS2-201ENST00000324938 CKS2P33552 79 aa16.33■□□□□ 0.21
LIMS2-201ENST00000324938 CFHR3Q02985 330 aa16.33■□□□□ 0.21
LIMS2-201ENST00000324938 C20orf173Q96LM9 149 aa16.33■□□□□ 0.21
LIMS2-201ENST00000324938 A0A096LNJ9 63 aa16.33■□□□□ 0.2
LIMS2-201ENST00000324938 LOC389332A0A1B0GUA5 103 aa16.33■□□□□ 0.2
LIMS2-201ENST00000324938 FAM106AQ4KMX7 169 aa16.33■□□□□ 0.2
LIMS2-201ENST00000324938 OR4X2Q8NGF9 303 aa16.33■□□□□ 0.2
LIMS2-201ENST00000324938 RNF185Q96GF1 192 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms