RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 WDR31Q8NA23 367 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 OR1L4Q8NGR5 311 aa8.19□□□□□ -1.1
SF3B2-201ENST00000322535 MED13LQ71F56 2210 aa8.18□□□□□ -1.1
SF3B2-201ENST00000322535 ENSAO43768 121 aaKnown RBP8.18□□□□□ -1.1
SF3B2-201ENST00000322535 MPV17P39210 176 aa8.18□□□□□ -1.1
SF3B2-201ENST00000322535 UTF1Q5T230 341 aa8.18□□□□□ -1.1
SF3B2-201ENST00000322535 CEND1Q8N111 149 aa8.18□□□□□ -1.1
SF3B2-201ENST00000322535 FAM57AQ8TBR7 257 aa8.18□□□□□ -1.1
SF3B2-201ENST00000322535 DLX4Q92988 240 aaPredicted RBP8.18□□□□□ -1.1
SF3B2-201ENST00000322535 MRPL32Q9BYC8 188 aaKnown RBP8.18□□□□□ -1.1
SF3B2-201ENST00000322535 KLF12Q9Y4X4 402 aa8.18□□□□□ -1.1
SF3B2-201ENST00000322535 ABCA1O95477 2261 aa8.18□□□□□ -1.1
SF3B2-201ENST00000322535 OR2H2O95918 312 aa8.18□□□□□ -1.1
SF3B2-201ENST00000322535 IGHV3-48P01763 117 aa8.18□□□□□ -1.1
SF3B2-201ENST00000322535 CECR9P0C854 216 aa8.18□□□□□ -1.1
SF3B2-201ENST00000322535 SPG11Q96JI7 2443 aa8.18□□□□□ -1.1
SF3B2-201ENST00000322535 TRBV25-1A0A075B6N4 114 aa8.17□□□□□ -1.1
SF3B2-201ENST00000322535 TMEM262E9PQX1 116 aa8.17□□□□□ -1.1
SF3B2-201ENST00000322535 MBD3L2Q8NHZ7 208 aaPredicted RBP8.17□□□□□ -1.1
SF3B2-201ENST00000322535 BAALCQ8WXS3 180 aa8.17□□□□□ -1.1
SF3B2-201ENST00000322535 HIST1H4GQ99525 98 aa8.17□□□□□ -1.1
SF3B2-201ENST00000322535 MZT1Q08AG7 82 aa8.17□□□□□ -1.1
SF3B2-201ENST00000322535 TBC1D28Q2M2D7 210 aa8.17□□□□□ -1.1
SF3B2-201ENST00000322535 SPRNQ5BIV9 151 aa8.17□□□□□ -1.1
SF3B2-201ENST00000322535 FAM231DQ6ZW35 169 aa8.17□□□□□ -1.1
SF3B2-201ENST00000322535 OR9G1Q8NH87 305 aa8.17□□□□□ -1.1
SF3B2-201ENST00000322535 TMEM160Q9NX00 188 aa8.17□□□□□ -1.1
SF3B2-201ENST00000322535 GRPP07492 148 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 C8orf88P0DMB2 117 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 GRNP28799 593 aaKnown RBP8.16□□□□□ -1.1
SF3B2-201ENST00000322535 CDSNQ15517 529 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 KRTAP27-1Q3LI81 207 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 Q6Q795 121 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 RND1Q92730 232 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 DUX3Q96PT4 197 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 DSCAML1Q8TD84 2053 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 TET2Q6N021 2002 aaPredicted RBP8.16□□□□□ -1.1
SF3B2-201ENST00000322535 ZNF462Q96JM2 2506 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 ARFGEF3Q5TH69 2177 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 PRR20EP86478 221 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 PRR20CP86479 221 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 PRR20DP86480 221 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 PRR20BP86481 221 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 PRR20AP86496 221 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 KLF17Q5JT82 389 aaPredicted RBP8.16□□□□□ -1.1
SF3B2-201ENST00000322535 ZCCHC24Q8N2G6 241 aaKnown RBP8.16□□□□□ -1.1
SF3B2-201ENST00000322535 OR10J6PQ8NGY7 276 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 SLC25A10Q9UBX3 287 aaPredicted RBP8.16□□□□□ -1.1
SF3B2-201ENST00000322535 CELSR1Q9NYQ6 3014 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 FAM208BQ5VWN6 2430 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 IGHV1-18A0A0C4DH31 117 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 C12orf77C9JDV5 145 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 PRSS46E5RG02 174 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 NDUFA7O95182 113 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 ERVK-16P61578 105 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 MSMPQ1L6U9 139 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 ZNF826PQ6ZT77 177 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 CIARTQ8N365 385 aaPredicted RBP8.16□□□□□ -1.1
SF3B2-201ENST00000322535 IFI27L1Q96BM0 104 aa8.16□□□□□ -1.1
SF3B2-201ENST00000322535 IGKV1OR2-108A0A075B7D4 117 aa8.15□□□□□ -1.1
SF3B2-201ENST00000322535 A0A096LNJ9 63 aa8.15□□□□□ -1.1
SF3B2-201ENST00000322535 TRAV8-1A0A0A6YYK1 113 aa8.15□□□□□ -1.1
SF3B2-201ENST00000322535 FAM236AA0A1B0GUQ0 79 aa8.15□□□□□ -1.1
SF3B2-201ENST00000322535 FAM236BA0A1B0GV22 79 aa8.15□□□□□ -1.1
SF3B2-201ENST00000322535 ARMS2P0C7Q2 107 aa8.15□□□□□ -1.1
SF3B2-201ENST00000322535 ORM2P19652 201 aa8.15□□□□□ -1.1
SF3B2-201ENST00000322535 KIR2DS2P43631 304 aa8.15□□□□□ -1.1
SF3B2-201ENST00000322535 LGALS9BQ3B8N2 356 aa8.15□□□□□ -1.1
SF3B2-201ENST00000322535 LGALS9CQ6DKI2 356 aa8.15□□□□□ -1.1
SF3B2-201ENST00000322535 ZNF497Q6ZNH5 498 aa8.15□□□□□ -1.1
SF3B2-201ENST00000322535 ANKRD29Q8N6D5 301 aa8.15□□□□□ -1.1
SF3B2-201ENST00000322535 GATD1Q8NB37 220 aa8.15□□□□□ -1.1
SF3B2-201ENST00000322535 USP9XQ93008 2570 aaPredicted RBP8.15□□□□□ -1.11
SF3B2-201ENST00000322535 TRAV8-2A0A0B4J237 113 aa8.15□□□□□ -1.11
SF3B2-201ENST00000322535 PRSS1P07477 247 aa8.15□□□□□ -1.11
SF3B2-201ENST00000322535 ZFP2Q6ZN57 461 aa8.15□□□□□ -1.11
SF3B2-201ENST00000322535 ZNF329Q86UD4 541 aa8.15□□□□□ -1.11
SF3B2-201ENST00000322535 KLF14Q8TD94 323 aaPredicted RBP8.15□□□□□ -1.11
SF3B2-201ENST00000322535 PGPA6NDG6 321 aa8.14□□□□□ -1.11
SF3B2-201ENST00000322535 RPL35AP18077 110 aaKnown RBP8.14□□□□□ -1.11
SF3B2-201ENST00000322535 C9orf153Q5TBE3 101 aa8.14□□□□□ -1.11
SF3B2-201ENST00000322535 Q71RC1 249 aaPredicted RBP8.14□□□□□ -1.11
SF3B2-201ENST00000322535 TRPT1Q86TN4 253 aaKnown RBP8.14□□□□□ -1.11
SF3B2-201ENST00000322535 PAXXQ9BUH6 204 aa8.14□□□□□ -1.11
SF3B2-201ENST00000322535 C1orf43Q9BWL3 253 aa8.14□□□□□ -1.11
SF3B2-201ENST00000322535 PKIGQ9Y2B9 76 aa8.14□□□□□ -1.11
SF3B2-201ENST00000322535 TRBV6-6A0A0A6YYG2 114 aa8.14□□□□□ -1.11
SF3B2-201ENST00000322535 NPIPB11E5RHQ5 1161 aa8.14□□□□□ -1.11
SF3B2-201ENST00000322535 MORN3Q6PF18 240 aaPredicted RBP8.14□□□□□ -1.11
SF3B2-201ENST00000322535 OR4C13Q8NGP0 309 aa8.14□□□□□ -1.11
SF3B2-201ENST00000322535 CELSR2Q9HCU4 2923 aa8.14□□□□□ -1.11
SF3B2-201ENST00000322535 TINCRA0A1B0GVN0 87 aa8.13□□□□□ -1.11
SF3B2-201ENST00000322535 A0A1B0GX51 115 aa8.13□□□□□ -1.11
SF3B2-201ENST00000322535 D6R8Y8 96 aa8.13□□□□□ -1.11
SF3B2-201ENST00000322535 C10orf126Q8N4M7 172 aa8.13□□□□□ -1.11
SF3B2-201ENST00000322535 C15orf53Q8NAA6 179 aa8.13□□□□□ -1.11
SF3B2-201ENST00000322535 DCTN5Q9BTE1 182 aa8.13□□□□□ -1.11
SF3B2-201ENST00000322535 SMKR1H3BMG3 65 aa8.13□□□□□ -1.11
SF3B2-201ENST00000322535 IGKV3-15P01624 115 aa8.13□□□□□ -1.11
SF3B2-201ENST00000322535 ORM1P02763 201 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms