RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PMCHP20382 165 aa5.82□□□□□ -1.48
IFT88-201ENST00000319980 AMTP48728 403 aa5.82□□□□□ -1.48
IFT88-201ENST00000319980 FOXA3P55318 350 aaPredicted RBP5.82□□□□□ -1.48
IFT88-201ENST00000319980 SAPCD1Q5SSQ6 148 aa5.82□□□□□ -1.48
IFT88-201ENST00000319980 UNQ9165/PRO28630Q6UXU0 137 aa5.82□□□□□ -1.48
IFT88-201ENST00000319980 FAM19A2Q8N3H0 131 aa5.82□□□□□ -1.48
IFT88-201ENST00000319980 ALKBH7Q9BT30 221 aaPredicted RBP5.82□□□□□ -1.48
IFT88-201ENST00000319980 ARMS2P0C7Q2 107 aa5.82□□□□□ -1.48
IFT88-201ENST00000319980 ERCC8Q13216 396 aa5.82□□□□□ -1.48
IFT88-201ENST00000319980 C1orf194Q5T5A4 169 aa5.82□□□□□ -1.48
IFT88-201ENST00000319980 ZNF664Q8N3J9 261 aa5.82□□□□□ -1.48
IFT88-201ENST00000319980 CREBBPQ92793 2442 aa5.82□□□□□ -1.48
IFT88-201ENST00000319980 A0A1B0GUT8 65 aa5.81□□□□□ -1.48
IFT88-201ENST00000319980 TSTD3H0UI37 97 aa5.81□□□□□ -1.48
IFT88-201ENST00000319980 SH2D1AO60880 128 aa5.81□□□□□ -1.48
IFT88-201ENST00000319980 FAM162BQ5T6X4 162 aa5.81□□□□□ -1.48
IFT88-201ENST00000319980 USMG5Q96IX5 58 aa5.81□□□□□ -1.48
IFT88-201ENST00000319980 KCNS1Q96KK3 526 aa5.81□□□□□ -1.48
IFT88-201ENST00000319980 ATP6V0BQ99437 205 aa5.81□□□□□ -1.48
IFT88-201ENST00000319980 A0A087X0K7 114 aa5.81□□□□□ -1.48
IFT88-201ENST00000319980 NTF3P20783 257 aa5.81□□□□□ -1.48
IFT88-201ENST00000319980 PKIAP61925 76 aa5.81□□□□□ -1.48
IFT88-201ENST00000319980 C8orf86Q6ZUL3 223 aa5.81□□□□□ -1.48
IFT88-201ENST00000319980 OR4X2Q8NGF9 303 aa5.81□□□□□ -1.48
IFT88-201ENST00000319980 SLC50A1Q9BRV3 221 aa5.81□□□□□ -1.48
IFT88-201ENST00000319980 NAGKQ9UJ70 344 aa5.81□□□□□ -1.48
IFT88-201ENST00000319980 TMEM189A5PLL7 270 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 HAX1O00165 279 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 ZNF324O75467 553 aaPredicted RBP5.8□□□□□ -1.48
IFT88-201ENST00000319980 ZNF705DP0CH99 300 aaPredicted RBP5.8□□□□□ -1.48
IFT88-201ENST00000319980 ZNF705BP0CI00 300 aaPredicted RBP5.8□□□□□ -1.48
IFT88-201ENST00000319980 ZNF80P51504 273 aaPredicted RBP5.8□□□□□ -1.48
IFT88-201ENST00000319980 U3KQE9 123 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 MUC21A0A0G2JKD1 596 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 MUC21A0A140T8X8 626 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 FBLL1A6NHQ2 334 aaKnown RBP5.8□□□□□ -1.48
IFT88-201ENST00000319980 H3BUA1 57 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 KRTDAPP60985 99 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 LOXL1Q08397 574 aaPredicted RBP5.8□□□□□ -1.48
IFT88-201ENST00000319980 DEFB113Q30KQ7 82 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 MUC21Q5SSG8 566 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 NDFIP1Q9BT67 221 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 NRN1Q9NPD7 142 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.8□□□□□ -1.48
IFT88-201ENST00000319980 TRAV8-2A0A0B4J237 113 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 J3QLI3 93 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 NDUFA4O00483 81 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 HSBP1O75506 76 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 IGLV1-40P01703 118 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 RIGQ13278 110 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 Q5PR19 223 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 RNASEKQ6P5S7 137 aaKnown RBP5.8□□□□□ -1.48
IFT88-201ENST00000319980 C16orf92Q96LL3 132 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 RNF114Q9Y508 228 aa5.8□□□□□ -1.48
IFT88-201ENST00000319980 A0A0G2JLM5 398 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 M0QZ24 198 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 ORM1P02763 201 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 IGHV4-31P0DP07 118 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 BMI1P35226 326 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 RPL11P62913 178 aaKnown RBP5.79□□□□□ -1.48
IFT88-201ENST00000319980 KLF5Q13887 457 aaPredicted RBP5.79□□□□□ -1.48
IFT88-201ENST00000319980 LYZL1Q6UWQ5 148 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 COX8CQ7Z4L0 72 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 BORCS7Q96B45 105 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 IGKV3-7A0A075B6H7 116 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 LOC102724200A0A096LPH7 203 aaPredicted RBP5.79□□□□□ -1.48
IFT88-201ENST00000319980 BRI3O95415 125 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 DDTP30046 118 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 Q6AWC8 147 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 IL17RELQ6ZVW7 336 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 NIT1Q86X76 327 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 GLMPQ8WWB7 406 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 NPFFR1Q9GZQ6 430 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 AGPAT4-IT1Q9H0P7 198 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 SELENOKQ9Y6D0 94 aa5.79□□□□□ -1.48
IFT88-201ENST00000319980 FABP5P3A8MUU1 101 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 TDRG1Q3Y452 100 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 C10orf99Q6UWK7 81 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 LURAP1LQ8IV03 231 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 DOPEY2Q9Y3R5 2298 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 TLN2Q9Y4G6 2542 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 SETXQ7Z333 2677 aaKnown RBP5.78□□□□□ -1.48
IFT88-201ENST00000319980 TMEM213A2RRL7 107 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 RBAKDNA6NC62 111 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 DEFA6Q01524 100 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 CFHR3Q02985 330 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 TMEM78Q5T7P6 136 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 Q96MF0 132 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 CITED2Q99967 270 aaPredicted RBP5.78□□□□□ -1.48
IFT88-201ENST00000319980 BEX4Q9NWD9 120 aaPredicted RBP5.78□□□□□ -1.48
IFT88-201ENST00000319980 MXRA5Q9NR99 2828 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 M0R2Z0 102 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 CCDC168Q8NDH2 2452 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 APCP25054 2843 aa5.78□□□□□ -1.48
IFT88-201ENST00000319980 TEX15Q9BXT5 2789 aa5.77□□□□□ -1.49
IFT88-201ENST00000319980 CSN3P07498 182 aa5.77□□□□□ -1.49
IFT88-201ENST00000319980 PSMB8P28062 276 aa5.77□□□□□ -1.49
IFT88-201ENST00000319980 ZNF138P52744 262 aa5.77□□□□□ -1.49
IFT88-201ENST00000319980 PMCHL1Q16048 86 aa5.77□□□□□ -1.49
IFT88-201ENST00000319980 URB1-AS1Q96HZ7 61 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms