RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TEX48A0A1B0GUV7 120 aa12.19□□□□□ -0.46
SHROOM1-201ENST00000319854 I3L2K1 104 aa12.19□□□□□ -0.46
SHROOM1-201ENST00000319854 FCGR2BP31994 310 aaPredicted RBP12.19□□□□□ -0.46
SHROOM1-201ENST00000319854 RPL24P83731 157 aaKnown RBP12.19□□□□□ -0.46
SHROOM1-201ENST00000319854 PRNTQ86SH4 94 aa12.19□□□□□ -0.46
SHROOM1-201ENST00000319854 PRSS3P2Q8NHM4 247 aa12.19□□□□□ -0.46
SHROOM1-201ENST00000319854 C8orf46Q8TAG6 207 aa12.19□□□□□ -0.46
SHROOM1-201ENST00000319854 C11orf71Q6IPW1 123 aa12.19□□□□□ -0.46
SHROOM1-201ENST00000319854 LY6G5BQ8NDX9 201 aa12.19□□□□□ -0.46
SHROOM1-201ENST00000319854 C18orf15Q96N68 181 aa12.19□□□□□ -0.46
SHROOM1-201ENST00000319854 GFRA4Q9GZZ7 299 aa12.19□□□□□ -0.46
SHROOM1-201ENST00000319854 NPIPB6E9PJ23 425 aa12.18□□□□□ -0.46
SHROOM1-201ENST00000319854 K7EIM0 57 aa12.18□□□□□ -0.46
SHROOM1-201ENST00000319854 AZU1P20160 251 aa12.18□□□□□ -0.46
SHROOM1-201ENST00000319854 CEACAM3P40198 252 aa12.18□□□□□ -0.46
SHROOM1-201ENST00000319854 A1L4Q6 167 aa12.18□□□□□ -0.46
SHROOM1-201ENST00000319854 GP9P14770 177 aa12.18□□□□□ -0.46
SHROOM1-201ENST00000319854 ABCA12Q86UK0 2595 aa12.18□□□□□ -0.46
SHROOM1-201ENST00000319854 CACNG7P62955 275 aa12.18□□□□□ -0.46
SHROOM1-201ENST00000319854 FA2HQ7L5A8 372 aa12.18□□□□□ -0.46
SHROOM1-201ENST00000319854 CFHR4Q92496 578 aa12.18□□□□□ -0.46
SHROOM1-201ENST00000319854 FMC1Q96HJ9 113 aa12.18□□□□□ -0.46
SHROOM1-201ENST00000319854 M0R3E3 92 aa12.17□□□□□ -0.46
SHROOM1-201ENST00000319854 SMAD7O15105 426 aaKnown RBP12.17□□□□□ -0.46
SHROOM1-201ENST00000319854 PRTN3P24158 256 aa12.17□□□□□ -0.46
SHROOM1-201ENST00000319854 BPESC1Q9GZL8 116 aa12.17□□□□□ -0.46
SHROOM1-201ENST00000319854 SMAGPQ0VAQ4 97 aa12.17□□□□□ -0.46
SHROOM1-201ENST00000319854 C5orf64Q2M2E5 130 aa12.17□□□□□ -0.46
SHROOM1-201ENST00000319854 ZNF462Q96JM2 2506 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 CSN1S1P47710 185 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 HSD52Q0P140 79 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 IGFL4Q6B9Z1 124 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 DOPEY2Q9Y3R5 2298 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 FBLL1A6NHQ2 334 aaKnown RBP12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 NDUFS8O00217 210 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 IGLV2-11P01706 119 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 ECSCRQ19T08 205 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 STXBP6Q8NFX7 210 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 OR11H6Q8NGC7 330 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 EPG5Q9HCE0 2579 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 IGHV3OR16-13A0A075B7E8 117 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 IGHV3-74A0A0B4J1X5 117 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 A0A1B0GUT8 65 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 K7EMI3 77 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 Q86TA4 180 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 WFDC3Q8IUB2 231 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 TTTY13Q9BZ97 58 aa12.16□□□□□ -0.46
SHROOM1-201ENST00000319854 NMUP48645 174 aa12.15□□□□□ -0.46
SHROOM1-201ENST00000319854 ARPC1AQ92747 370 aa12.15□□□□□ -0.46
SHROOM1-201ENST00000319854 TLN2Q9Y4G6 2542 aa12.15□□□□□ -0.46
SHROOM1-201ENST00000319854 SIGLEC8Q9NYZ4 499 aa12.15□□□□□ -0.46
SHROOM1-201ENST00000319854 CFAP161Q6P656 301 aa12.14□□□□□ -0.47
SHROOM1-201ENST00000319854 RNF125Q96EQ8 232 aa12.14□□□□□ -0.47
SHROOM1-201ENST00000319854 CREBBPQ92793 2442 aa12.14□□□□□ -0.47
SHROOM1-201ENST00000319854 SAMD5Q5TGI4 173 aa12.14□□□□□ -0.47
SHROOM1-201ENST00000319854 OR5A1Q8NGJ0 315 aa12.14□□□□□ -0.47
SHROOM1-201ENST00000319854 LINC00527Q9UJ94 153 aa12.14□□□□□ -0.47
SHROOM1-201ENST00000319854 K7ERJ3 54 aa12.14□□□□□ -0.47
SHROOM1-201ENST00000319854 HOXB4P17483 251 aaPredicted RBP12.14□□□□□ -0.47
SHROOM1-201ENST00000319854 PTPN13Q12923 2485 aa12.14□□□□□ -0.47
SHROOM1-201ENST00000319854 IGHV3-66A0A0C4DH42 116 aa12.13□□□□□ -0.47
SHROOM1-201ENST00000319854 FXYD2P54710 66 aa12.13□□□□□ -0.47
SHROOM1-201ENST00000319854 DPF1Q92782 380 aa12.13□□□□□ -0.47
SHROOM1-201ENST00000319854 DKK2Q9UBU2 259 aa12.13□□□□□ -0.47
SHROOM1-201ENST00000319854 DOPEY1Q5JWR5 2465 aa12.13□□□□□ -0.47
SHROOM1-201ENST00000319854 D6R8Y8 96 aa12.13□□□□□ -0.47
SHROOM1-201ENST00000319854 FABP2P12104 132 aa12.13□□□□□ -0.47
SHROOM1-201ENST00000319854 TMEM219Q86XT9 240 aa12.13□□□□□ -0.47
SHROOM1-201ENST00000319854 ZNF491Q8N8L2 437 aa12.13□□□□□ -0.47
SHROOM1-201ENST00000319854 TMSB15BA0A087X1C1 80 aa12.12□□□□□ -0.47
SHROOM1-201ENST00000319854 LGALS9BQ3B8N2 356 aa12.12□□□□□ -0.47
SHROOM1-201ENST00000319854 LGALS9CQ6DKI2 356 aa12.12□□□□□ -0.47
SHROOM1-201ENST00000319854 FANCD2OSQ96PS1 177 aa12.12□□□□□ -0.47
SHROOM1-201ENST00000319854 IGHV3-49A0A0A0MS15 119 aa12.12□□□□□ -0.47
SHROOM1-201ENST00000319854 SERTM2A0A1B0GWG4 89 aa12.12□□□□□ -0.47
SHROOM1-201ENST00000319854 M0R1W7 72 aa12.12□□□□□ -0.47
SHROOM1-201ENST00000319854 SMIM17P0DL12 118 aa12.12□□□□□ -0.47
SHROOM1-201ENST00000319854 CRIP1P50238 77 aa12.12□□□□□ -0.47
SHROOM1-201ENST00000319854 OR9G4Q8NGQ1 327 aa12.12□□□□□ -0.47
SHROOM1-201ENST00000319854 ODF3BA8MYP8 253 aa12.12□□□□□ -0.47
SHROOM1-201ENST00000319854 PSG3Q16557 428 aa12.12□□□□□ -0.47
SHROOM1-201ENST00000319854 TSSC4Q9Y5U2 329 aaPredicted RBP12.12□□□□□ -0.47
SHROOM1-201ENST00000319854 ABCA2Q9BZC7 2435 aa12.12□□□□□ -0.47
SHROOM1-201ENST00000319854 TMEM213A2RRL7 107 aa12.11□□□□□ -0.47
SHROOM1-201ENST00000319854 LINC01548A6NM66 108 aa12.11□□□□□ -0.47
SHROOM1-201ENST00000319854 SAA4P35542 130 aa12.11□□□□□ -0.47
SHROOM1-201ENST00000319854 IGKV2D-26A0A0A0MRZ7 120 aa12.11□□□□□ -0.47
SHROOM1-201ENST00000319854 GCSHP23434 173 aa12.11□□□□□ -0.47
SHROOM1-201ENST00000319854 OR4X2Q8NGF9 303 aa12.11□□□□□ -0.47
SHROOM1-201ENST00000319854 ITLN2Q8WWU7 325 aaPredicted RBP12.11□□□□□ -0.47
SHROOM1-201ENST00000319854 G3V318 75 aa12.1□□□□□ -0.47
SHROOM1-201ENST00000319854 RIGQ13278 110 aa12.1□□□□□ -0.47
SHROOM1-201ENST00000319854 AMN1Q8IY45 258 aa12.1□□□□□ -0.47
SHROOM1-201ENST00000319854 SIGMAR1Q99720 223 aa12.1□□□□□ -0.47
SHROOM1-201ENST00000319854 C21orf62Q9NYP8 219 aa12.1□□□□□ -0.47
SHROOM1-201ENST00000319854 CUBNO60494 3623 aa12.1□□□□□ -0.47
SHROOM1-201ENST00000319854 WFDC2Q14508 124 aa12.1□□□□□ -0.47
SHROOM1-201ENST00000319854 PVRIGQ6DKI7 326 aa12.1□□□□□ -0.47
SHROOM1-201ENST00000319854 ZNF562Q6V9R5 426 aa12.1□□□□□ -0.47
SHROOM1-201ENST00000319854 BRD3OSQ6XYD6 125 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms