RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 KIR3DS1Q14943 382 aa11.39□□□□□ -0.59
PDLIM5-202ENST00000318007 TMEM78Q5T7P6 136 aa11.39□□□□□ -0.59
PDLIM5-202ENST00000318007 STHQ8IWL8 128 aa11.39□□□□□ -0.59
PDLIM5-202ENST00000318007 SLC35B3Q9H1N7 401 aa11.39□□□□□ -0.59
PDLIM5-202ENST00000318007 K7EQM0 130 aa11.39□□□□□ -0.59
PDLIM5-202ENST00000318007 IGLV2-11P01706 119 aa11.39□□□□□ -0.59
PDLIM5-202ENST00000318007 SMUG1Q53HV7 270 aa11.39□□□□□ -0.59
PDLIM5-202ENST00000318007 FOXI2Q6ZQN5 318 aa11.39□□□□□ -0.59
PDLIM5-202ENST00000318007 C8orf49Q96NF6 230 aa11.39□□□□□ -0.59
PDLIM5-202ENST00000318007 PPP1R14DQ9NXH3 145 aa11.39□□□□□ -0.59
PDLIM5-202ENST00000318007 DNAH3Q8TD57 4116 aa11.39□□□□□ -0.59
PDLIM5-202ENST00000318007 TRBV20OR9-2A0A075B6H5 130 aa11.38□□□□□ -0.59
PDLIM5-202ENST00000318007 TRAV12-2A0A075B6T6 113 aa11.38□□□□□ -0.59
PDLIM5-202ENST00000318007 FLI1Q01543 452 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-202ENST00000318007 EGFEM1PQ0D2K5 195 aa11.38□□□□□ -0.59
PDLIM5-202ENST00000318007 SPINK13Q1W4C9 94 aa11.38□□□□□ -0.59
PDLIM5-202ENST00000318007 MRPL53Q96EL3 112 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-202ENST00000318007 SMIM7Q9BQ49 75 aa11.38□□□□□ -0.59
PDLIM5-202ENST00000318007 TXNDC17Q9BRA2 123 aa11.38□□□□□ -0.59
PDLIM5-202ENST00000318007 SRD5A3Q9H8P0 318 aa11.38□□□□□ -0.59
PDLIM5-202ENST00000318007 PSG8Q9UQ74 426 aa11.38□□□□□ -0.59
PDLIM5-202ENST00000318007 CT45A10P0DMU9 189 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 CENPWQ5EE01 88 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 Q8N1Y9 231 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 CLEC5AQ9NY25 188 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 NBEAL2Q6ZNJ1 2754 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 RBMY1BA6NDE4 496 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 RBMY1EA6NEQ0 496 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 ZNF727A8MUV8 499 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 TMEM250H0YL14 139 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 H3BMM0 161 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 RBMY1DP0C7P1 496 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 HLA-DRB4P13762 266 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 ADCYAP1P18509 176 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 SOHLH1Q5JUK2 328 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 PRR27Q6MZM9 219 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 Q86TA4 180 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 C11orf52Q96A22 123 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 TVP23CQ96ET8 276 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 HLA-DRB4X5D2U9 266 aa11.37□□□□□ -0.59
PDLIM5-202ENST00000318007 MGST1P10620 155 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-202ENST00000318007 Q6ZQT7 251 aa11.36□□□□□ -0.59
PDLIM5-202ENST00000318007 TMEM75Q8N9X5 138 aa11.36□□□□□ -0.59
PDLIM5-202ENST00000318007 NPIPB6E9PJ23 425 aa11.36□□□□□ -0.59
PDLIM5-202ENST00000318007 F8W036 122 aa11.36□□□□□ -0.59
PDLIM5-202ENST00000318007 GNG4P50150 75 aa11.36□□□□□ -0.59
PDLIM5-202ENST00000318007 FMC1Q96HJ9 113 aa11.36□□□□□ -0.59
PDLIM5-202ENST00000318007 TUBA4BQ9H853 241 aa11.36□□□□□ -0.59
PDLIM5-202ENST00000318007 IGHV4-30-4P0DP06 118 aa11.35□□□□□ -0.59
PDLIM5-202ENST00000318007 ZNF138P52744 262 aa11.35□□□□□ -0.59
PDLIM5-202ENST00000318007 TMEM183BQ1AE95 376 aa11.35□□□□□ -0.59
PDLIM5-202ENST00000318007 UQCC3Q6UW78 93 aa11.35□□□□□ -0.59
PDLIM5-202ENST00000318007 BAGE2Q86Y30 109 aa11.35□□□□□ -0.59
PDLIM5-202ENST00000318007 ZNF492Q9P255 531 aa11.35□□□□□ -0.59
PDLIM5-202ENST00000318007 TMEM218A2RU14 115 aa11.34□□□□□ -0.59
PDLIM5-202ENST00000318007 OR5I1Q13606 314 aa11.34□□□□□ -0.59
PDLIM5-202ENST00000318007 PRR9Q5T870 116 aa11.34□□□□□ -0.59
PDLIM5-202ENST00000318007 C9orf47Q6ZRZ4 202 aa11.34□□□□□ -0.59
PDLIM5-202ENST00000318007 IGF2BP2-AS1Q96M15 143 aa11.34□□□□□ -0.59
PDLIM5-202ENST00000318007 RBAKDNA6NC62 111 aa11.34□□□□□ -0.59
PDLIM5-202ENST00000318007 TCEAL7Q9BRU2 100 aa11.34□□□□□ -0.59
PDLIM5-202ENST00000318007 XCL2Q9UBD3 114 aa11.34□□□□□ -0.59
PDLIM5-202ENST00000318007 BTN1A1Q13410 526 aa11.33□□□□□ -0.6
PDLIM5-202ENST00000318007 TRPT1Q86TN4 253 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-202ENST00000318007 EIF4E3Q8N5X7 224 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-202ENST00000318007 KLF12Q9Y4X4 402 aa11.33□□□□□ -0.6
PDLIM5-202ENST00000318007 SERTM2A0A1B0GWG4 89 aa11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 DUSP14O95147 198 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 LTAP01374 205 aa11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 GPX1P07203 203 aa11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 RNASE4P34096 147 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 ZC2HC1AQ96GY0 325 aa11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 LINC00477Q96M19 166 aa11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 SMDT1Q9H4I9 107 aa11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 IGHV3OR16-12A0A075B7B8 117 aa11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 GCGP01275 180 aa11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 CMC4P56277 68 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 ADIRFQ15847 76 aa11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 DEFB121Q5J5C9 76 aa11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 AMTNQ6UX39 209 aa11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 OCC1Q8TAD7 63 aa11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 NDFIP1Q9BT67 221 aa11.32□□□□□ -0.6
PDLIM5-202ENST00000318007 MEGF8Q7Z7M0 2845 aa11.31□□□□□ -0.6
PDLIM5-202ENST00000318007 TRAV12-3A0A0B4J271 114 aa11.31□□□□□ -0.6
PDLIM5-202ENST00000318007 K7EN84 100 aa11.31□□□□□ -0.6
PDLIM5-202ENST00000318007 HTN1P15515 57 aa11.31□□□□□ -0.6
PDLIM5-202ENST00000318007 ZNF80P51504 273 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-202ENST00000318007 FAM110AQ9BQ89 295 aa11.31□□□□□ -0.6
PDLIM5-202ENST00000318007 NIPSNAP3BQ9BS92 247 aa11.31□□□□□ -0.6
PDLIM5-202ENST00000318007 CA1P00915 261 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-202ENST00000318007 IGLV2-8P01709 118 aa11.3□□□□□ -0.6
PDLIM5-202ENST00000318007 CDKN1BP46527 198 aa11.3□□□□□ -0.6
PDLIM5-202ENST00000318007 NAGKQ9UJ70 344 aa11.3□□□□□ -0.6
PDLIM5-202ENST00000318007 APOC3P02656 99 aa11.3□□□□□ -0.6
PDLIM5-202ENST00000318007 PRM2P04554 102 aa11.3□□□□□ -0.6
PDLIM5-202ENST00000318007 TAS2R60P59551 318 aa11.3□□□□□ -0.6
PDLIM5-202ENST00000318007 GFI1BQ5VTD9 330 aa11.3□□□□□ -0.6
PDLIM5-202ENST00000318007 LINC00322Q6ZN03 302 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-202ENST00000318007 ZFAND2AQ8N6M9 145 aa11.3□□□□□ -0.6
PDLIM5-202ENST00000318007 ARL6IP6Q8N6S5 226 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms