RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 MTORP42345 2549 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 PRSS47A8MTI9 375 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 HOXA3O43365 443 aaPredicted RBP6.03□□□□□ -1.44
CDHR3-201ENST00000317716 SNCGO76070 127 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 LTAP01374 205 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 EFNA4P52798 201 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 RAX2Q96IS3 184 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 NPFFR1Q9GZQ6 430 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 TNRC6BQ9UPQ9 1833 aaKnown RBP6.03□□□□□ -1.44
CDHR3-201ENST00000317716 TRAV26-1A0A087WT03 109 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.03□□□□□ -1.44
CDHR3-201ENST00000317716 K7ENP7 123 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 IGLV2-8P01709 118 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 PPBPP02775 128 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 GLRXP35754 106 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 UCNP55089 124 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 HERVK_113P61574 105 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 ERCC8Q13216 396 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 PATE2Q6UY27 113 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 C8orf46Q8TAG6 207 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 PHLDA3Q9Y5J5 127 aa6.03□□□□□ -1.44
CDHR3-201ENST00000317716 JMJD1CQ15652 2540 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 A0A0U1RRA0 63 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 CCL21O00585 134 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 MRPL51Q4U2R6 128 aaKnown RBP6.02□□□□□ -1.45
CDHR3-201ENST00000317716 TEX29Q8N6K0 151 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 C3orf56Q8N813 242 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 C16orf92Q96LL3 132 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 IGF2BP2-AS1Q96M15 143 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 MSRB1Q9NZV6 116 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 PTPRBP23467 1997 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 FAM90A9PA6NNJ1 464 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 J3QW42 95 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 IGHV1-46P01743 117 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 PPP1R27Q86WC6 154 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 C11orf53Q8IXP5 236 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.02□□□□□ -1.45
CDHR3-201ENST00000317716 LINC01560Q8TB33 94 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 IGHV3OR16-10A0A075B7F0 116 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 NPIPB6E9PJ23 425 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 DKK1O94907 266 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 HLA-DMBP28068 263 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 MFAP4P55083 255 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 LYPD2Q6UXB3 125 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 Q6ZSR3 168 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 TNFRSF14Q92956 283 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 MRPL35Q9NZE8 188 aaKnown RBP6.02□□□□□ -1.45
CDHR3-201ENST00000317716 LINC00527Q9UJ94 153 aa6.02□□□□□ -1.45
CDHR3-201ENST00000317716 ACANP16112 2415 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 TRAV12-3A0A0B4J271 114 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 LINC01549A6NIU2 74 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 C17orf58Q2M2W7 97 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 C1orf229Q6ZS94 237 aaPredicted RBP6.01□□□□□ -1.45
CDHR3-201ENST00000317716 FAM167A-AS1Q96KT0 104 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 VGLL1Q99990 258 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 ZNF256Q9Y2P7 627 aaPredicted RBP6.01□□□□□ -1.45
CDHR3-201ENST00000317716 ATP5LO75964 103 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 LGALS7P47929 136 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 TMEM200BQ69YZ2 307 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 FAM231DQ6ZW35 169 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 SPRY4Q9C004 299 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 UBTD1Q9HAC8 227 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 TRBV20-1A0A075B6N2 111 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 TRAV2A0A0B4J234 112 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 B5MCH6 92 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 LY6HO94772 140 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 NEGR1Q7Z3B1 354 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 PTH2Q96A98 100 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 LINC00312Q9Y6C7 94 aa6.01□□□□□ -1.45
CDHR3-201ENST00000317716 IGKV3D-20A0A0C4DH25 116 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 C16orf97H3BN30 126 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 NDUFS7O75251 213 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 KLF5Q13887 457 aaPredicted RBP6□□□□□ -1.45
CDHR3-201ENST00000317716 TMEM95Q3KNT9 176 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 RNF182Q8N6D2 247 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 NEU4Q8WWR8 484 aaPredicted RBP6□□□□□ -1.45
CDHR3-201ENST00000317716 TIMD4Q96H15 378 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 PSMB11A5LHX3 300 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 G3V4G9 280 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 F2RL2O00254 374 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 LGALS3P17931 250 aaKnown RBP6□□□□□ -1.45
CDHR3-201ENST00000317716 FAM104BQ5XKR9 115 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 GAFA1Q96PS6 74 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 NDUFA4L2Q9NRX3 87 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 FABP5P3A8MUU1 101 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 TNFRSF6BO95407 300 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 TMEM155Q4W5P6 130 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 C21orf62Q9NYP8 219 aa6□□□□□ -1.45
CDHR3-201ENST00000317716 TIMM23O14925 209 aa5.99□□□□□ -1.45
CDHR3-201ENST00000317716 P0C879 139 aa5.99□□□□□ -1.45
CDHR3-201ENST00000317716 SRD5A1P18405 259 aa5.99□□□□□ -1.45
CDHR3-201ENST00000317716 ATP5IP56385 69 aaPredicted RBP5.99□□□□□ -1.45
CDHR3-201ENST00000317716 Q71RC1 249 aaPredicted RBP5.99□□□□□ -1.45
CDHR3-201ENST00000317716 RNF138Q8WVD3 245 aa5.99□□□□□ -1.45
CDHR3-201ENST00000317716 CHTOPQ9Y3Y2 248 aaKnown RBP5.99□□□□□ -1.45
CDHR3-201ENST00000317716 A8MWV9 139 aa5.99□□□□□ -1.45
CDHR3-201ENST00000317716 VWC2LB2RUY7 222 aa5.99□□□□□ -1.45
CDHR3-201ENST00000317716 HLA-DRB4P13762 266 aa5.99□□□□□ -1.45
CDHR3-201ENST00000317716 NDPQ00604 133 aa5.99□□□□□ -1.45
CDHR3-201ENST00000317716 TMEM249Q2WGJ8 235 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms