RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 BCL6BQ8N143 479 aaPredicted RBP11□□□□□ -0.65
VRK3-201ENST00000316763 SH2D7A6NKC9 451 aaPredicted RBP10.99□□□□□ -0.65
VRK3-201ENST00000316763 BTF3P20290 206 aaKnown RBP10.99□□□□□ -0.65
VRK3-201ENST00000316763 RAB9AP51151 201 aa10.99□□□□□ -0.65
VRK3-201ENST00000316763 SPATA45Q537H7 98 aa10.99□□□□□ -0.65
VRK3-201ENST00000316763 SAPCD1Q5SSQ6 148 aa10.99□□□□□ -0.65
VRK3-201ENST00000316763 DMRTA1Q5VZB9 504 aa10.99□□□□□ -0.65
VRK3-201ENST00000316763 ZNF785A8K8V0 405 aa10.99□□□□□ -0.65
VRK3-201ENST00000316763 APOHP02749 345 aaPredicted RBP10.99□□□□□ -0.65
VRK3-201ENST00000316763 ECSCRQ19T08 205 aa10.99□□□□□ -0.65
VRK3-201ENST00000316763 KLK9Q2XQG4 91 aa10.99□□□□□ -0.65
VRK3-201ENST00000316763 KLHDC1Q8N7A1 406 aa10.99□□□□□ -0.65
VRK3-201ENST00000316763 KLK9Q9UKQ9 250 aa10.99□□□□□ -0.65
VRK3-201ENST00000316763 F8P00451 2351 aa10.98□□□□□ -0.65
VRK3-201ENST00000316763 C15orf32Q32M92 178 aa10.98□□□□□ -0.65
VRK3-201ENST00000316763 ZNF502Q8TBZ5 544 aa10.98□□□□□ -0.65
VRK3-201ENST00000316763 CTRLP40313 264 aa10.97□□□□□ -0.65
VRK3-201ENST00000316763 RHOGP84095 191 aa10.97□□□□□ -0.65
VRK3-201ENST00000316763 C9orf139Q6ZV77 190 aa10.97□□□□□ -0.65
VRK3-201ENST00000316763 Q71RC1 249 aaPredicted RBP10.97□□□□□ -0.65
VRK3-201ENST00000316763 GATD1Q8NB37 220 aa10.97□□□□□ -0.65
VRK3-201ENST00000316763 C8orf49Q96NF6 230 aa10.97□□□□□ -0.65
VRK3-201ENST00000316763 MAST4O15021 2626 aa10.97□□□□□ -0.65
VRK3-201ENST00000316763 SONP18583 2426 aaKnown RBP10.97□□□□□ -0.65
VRK3-201ENST00000316763 TMEM189A5PLL7 270 aa10.97□□□□□ -0.65
VRK3-201ENST00000316763 ATP6V0E1O15342 81 aa10.97□□□□□ -0.65
VRK3-201ENST00000316763 ARMS2P0C7Q2 107 aa10.97□□□□□ -0.65
VRK3-201ENST00000316763 LINC00614P0C842 121 aa10.97□□□□□ -0.65
VRK3-201ENST00000316763 CRIP1P50238 77 aa10.97□□□□□ -0.65
VRK3-201ENST00000316763 NUTF2P61970 127 aaKnown RBP10.97□□□□□ -0.65
VRK3-201ENST00000316763 IL17RELQ6ZVW7 336 aa10.97□□□□□ -0.65
VRK3-201ENST00000316763 C5orf56Q8N8D9 126 aa10.97□□□□□ -0.65
VRK3-201ENST00000316763 UQCR10Q9UDW1 63 aa10.97□□□□□ -0.65
VRK3-201ENST00000316763 C20orf202A1L168 122 aa10.96□□□□□ -0.65
VRK3-201ENST00000316763 OR5AL1P0C617 328 aa10.96□□□□□ -0.65
VRK3-201ENST00000316763 GPR183P32249 361 aa10.96□□□□□ -0.65
VRK3-201ENST00000316763 RELQ04864 619 aaPredicted RBP10.96□□□□□ -0.65
VRK3-201ENST00000316763 EBLN2Q6P2I7 272 aa10.96□□□□□ -0.65
VRK3-201ENST00000316763 COX8CQ7Z4L0 72 aa10.96□□□□□ -0.65
VRK3-201ENST00000316763 URB1-AS1Q96HZ7 61 aa10.96□□□□□ -0.65
VRK3-201ENST00000316763 ASCL2Q99929 193 aa10.96□□□□□ -0.65
VRK3-201ENST00000316763 A6NDX4 124 aa10.96□□□□□ -0.66
VRK3-201ENST00000316763 RPS20P60866 119 aaKnown RBP10.96□□□□□ -0.66
VRK3-201ENST00000316763 PRR31Q5SQ13 230 aa10.96□□□□□ -0.66
VRK3-201ENST00000316763 TMEM219Q86XT9 240 aa10.96□□□□□ -0.66
VRK3-201ENST00000316763 EEF1AKMT3Q96AZ1 226 aa10.96□□□□□ -0.66
VRK3-201ENST00000316763 TMEM70Q9BUB7 260 aa10.96□□□□□ -0.66
VRK3-201ENST00000316763 MOB4Q9Y3A3 225 aa10.96□□□□□ -0.66
VRK3-201ENST00000316763 IGKV2-40A0A087WW87 121 aaPredicted RBP10.95□□□□□ -0.66
VRK3-201ENST00000316763 C2orf70A6NJV1 201 aa10.95□□□□□ -0.66
VRK3-201ENST00000316763 H3BUX3 64 aa10.95□□□□□ -0.66
VRK3-201ENST00000316763 SH2D1AO60880 128 aa10.95□□□□□ -0.66
VRK3-201ENST00000316763 IGKV2D-40P01614 121 aaPredicted RBP10.95□□□□□ -0.66
VRK3-201ENST00000316763 CLEC3BP05452 202 aa10.95□□□□□ -0.66
VRK3-201ENST00000316763 BMI1P35226 326 aa10.95□□□□□ -0.66
VRK3-201ENST00000316763 DEFB112Q30KQ8 113 aa10.95□□□□□ -0.66
VRK3-201ENST00000316763 PRR25Q96S07 402 aa10.95□□□□□ -0.66
VRK3-201ENST00000316763 TPPP3Q9BW30 176 aa10.95□□□□□ -0.66
VRK3-201ENST00000316763 TMEM160Q9NX00 188 aa10.95□□□□□ -0.66
VRK3-201ENST00000316763 SMAD5-AS1Q9Y6J3 95 aa10.95□□□□□ -0.66
VRK3-201ENST00000316763 TRBV7-1A0A0A6YYK4 115 aa10.94□□□□□ -0.66
VRK3-201ENST00000316763 LCN12Q6JVE5 192 aa10.94□□□□□ -0.66
VRK3-201ENST00000316763 HIVEP2P31629 2446 aa10.94□□□□□ -0.66
VRK3-201ENST00000316763 TRAV9-2A0A087WT02 112 aa10.94□□□□□ -0.66
VRK3-201ENST00000316763 A0A087X0K7 114 aa10.94□□□□□ -0.66
VRK3-201ENST00000316763 IGHV1-24A0A0C4DH33 117 aa10.94□□□□□ -0.66
VRK3-201ENST00000316763 LEPROTL1O95214 131 aa10.94□□□□□ -0.66
VRK3-201ENST00000316763 IGLC3P0DOY3 106 aa10.94□□□□□ -0.66
VRK3-201ENST00000316763 IGHV3-35A0A0C4DH35 117 aa10.93□□□□□ -0.66
VRK3-201ENST00000316763 M0QZ24 198 aa10.93□□□□□ -0.66
VRK3-201ENST00000316763 TCAPO15273 167 aa10.93□□□□□ -0.66
VRK3-201ENST00000316763 PRB4P10163 310 aaPredicted RBP10.93□□□□□ -0.66
VRK3-201ENST00000316763 ZNF493Q6ZR52 646 aa10.93□□□□□ -0.66
VRK3-201ENST00000316763 TEX29Q8N6K0 151 aa10.93□□□□□ -0.66
VRK3-201ENST00000316763 ZFAND3Q9H8U3 227 aa10.93□□□□□ -0.66
VRK3-201ENST00000316763 CLEC5AQ9NY25 188 aa10.93□□□□□ -0.66
VRK3-201ENST00000316763 LYZL1Q6UWQ5 148 aa10.92□□□□□ -0.66
VRK3-201ENST00000316763 CLEC19AQ6UXS0 136 aa10.92□□□□□ -0.66
VRK3-201ENST00000316763 ATOH7Q8N100 152 aa10.92□□□□□ -0.66
VRK3-201ENST00000316763 SLC50A1Q9BRV3 221 aa10.92□□□□□ -0.66
VRK3-201ENST00000316763 HSPB8Q9UJY1 196 aa10.92□□□□□ -0.66
VRK3-201ENST00000316763 INAFM1C9JVW0 142 aa10.92□□□□□ -0.66
VRK3-201ENST00000316763 G3V318 75 aa10.92□□□□□ -0.66
VRK3-201ENST00000316763 CRXO43186 299 aaPredicted RBP10.92□□□□□ -0.66
VRK3-201ENST00000316763 BUB3O43684 328 aa10.92□□□□□ -0.66
VRK3-201ENST00000316763 RPLP1P05386 114 aaKnown RBP10.92□□□□□ -0.66
VRK3-201ENST00000316763 SRSF2Q01130 221 aaKnown RBP10.92□□□□□ -0.66
VRK3-201ENST00000316763 ATP5G2Q06055 141 aa10.92□□□□□ -0.66
VRK3-201ENST00000316763 LY6EQ16553 131 aa10.92□□□□□ -0.66
VRK3-201ENST00000316763 Q6ZN92 141 aa10.92□□□□□ -0.66
VRK3-201ENST00000316763 ATP6V0BQ99437 205 aa10.92□□□□□ -0.66
VRK3-201ENST00000316763 MXRA5Q9NR99 2828 aa10.91□□□□□ -0.66
VRK3-201ENST00000316763 IGHV3OR16-8A0A075B7F1 116 aa10.91□□□□□ -0.66
VRK3-201ENST00000316763 TMSB15BA0A087X1C1 80 aa10.91□□□□□ -0.66
VRK3-201ENST00000316763 HNRNPA3P51991 378 aaKnown RBP10.91□□□□□ -0.66
VRK3-201ENST00000316763 FA2HQ7L5A8 372 aa10.91□□□□□ -0.66
VRK3-201ENST00000316763 CCDC140Q96MF4 163 aa10.91□□□□□ -0.66
VRK3-201ENST00000316763 METTL26Q96S19 204 aa10.91□□□□□ -0.66
VRK3-201ENST00000316763 VGLL1Q99990 258 aa10.91□□□□□ -0.66
VRK3-201ENST00000316763 MAP1LC3CQ9BXW4 147 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms