RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 SLC50A1Q9BRV3 221 aa11.96□□□□□ -0.49
CALR-201ENST00000316448 HIGD1CA8MV81 97 aa11.96□□□□□ -0.5
CALR-201ENST00000316448 C11orf44Q8N8P7 122 aa11.96□□□□□ -0.5
CALR-201ENST00000316448 OR4B1Q8NGF8 309 aa11.96□□□□□ -0.5
CALR-201ENST00000316448 C12orf57Q99622 126 aa11.96□□□□□ -0.5
CALR-201ENST00000316448 ASCL2Q99929 193 aa11.96□□□□□ -0.5
CALR-201ENST00000316448 GPR61Q9BZJ8 451 aa11.96□□□□□ -0.5
CALR-201ENST00000316448 GFRA4Q9GZZ7 299 aa11.96□□□□□ -0.5
CALR-201ENST00000316448 IGKV2-40A0A087WW87 121 aaPredicted RBP11.95□□□□□ -0.5
CALR-201ENST00000316448 TRAV8-2A0A0B4J237 113 aa11.95□□□□□ -0.5
CALR-201ENST00000316448 IGHV7-4-1A0A0J9YVY3 117 aa11.95□□□□□ -0.5
CALR-201ENST00000316448 A8MWL6 223 aa11.95□□□□□ -0.5
CALR-201ENST00000316448 SPINK4O60575 86 aa11.95□□□□□ -0.5
CALR-201ENST00000316448 IGKV2D-40P01614 121 aaPredicted RBP11.95□□□□□ -0.5
CALR-201ENST00000316448 FAM106AQ4KMX7 169 aa11.95□□□□□ -0.5
CALR-201ENST00000316448 MRPL54Q6P161 138 aaKnown RBP11.95□□□□□ -0.5
CALR-201ENST00000316448 DUX3Q96PT4 197 aa11.95□□□□□ -0.5
CALR-201ENST00000316448 FAM231BA6NCW3 169 aa11.94□□□□□ -0.5
CALR-201ENST00000316448 ZNF705FA8MVS1 300 aaPredicted RBP11.94□□□□□ -0.5
CALR-201ENST00000316448 K7EMT4 169 aa11.94□□□□□ -0.5
CALR-201ENST00000316448 CD28P10747 220 aa11.94□□□□□ -0.5
CALR-201ENST00000316448 PDZD11Q5EBL8 140 aa11.94□□□□□ -0.5
CALR-201ENST00000316448 ATP5L2Q7Z4Y8 100 aa11.94□□□□□ -0.5
CALR-201ENST00000316448 DAZAP1Q96EP5 407 aaKnown RBP11.94□□□□□ -0.5
CALR-201ENST00000316448 RHPN1-AS1Q9BWJ2 59 aa11.94□□□□□ -0.5
CALR-201ENST00000316448 SMPXQ9UHP9 88 aa11.94□□□□□ -0.5
CALR-201ENST00000316448 TMEM213A2RRL7 107 aa11.94□□□□□ -0.5
CALR-201ENST00000316448 HLA-DQA1P01909 254 aa11.94□□□□□ -0.5
CALR-201ENST00000316448 HOXD3P31249 432 aaPredicted RBP11.94□□□□□ -0.5
CALR-201ENST00000316448 SYNJ2BPP57105 145 aa11.94□□□□□ -0.5
CALR-201ENST00000316448 RNF182Q8N6D2 247 aa11.94□□□□□ -0.5
CALR-201ENST00000316448 GTSF1Q8WW33 167 aa11.94□□□□□ -0.5
CALR-201ENST00000316448 A0A1B0GXF2 115 aa11.93□□□□□ -0.5
CALR-201ENST00000316448 SLURP1P55000 103 aa11.93□□□□□ -0.5
CALR-201ENST00000316448 LCN12Q6JVE5 192 aa11.93□□□□□ -0.5
CALR-201ENST00000316448 C8orf86Q6ZUL3 223 aa11.93□□□□□ -0.5
CALR-201ENST00000316448 HIST1H2BLQ99880 126 aa11.93□□□□□ -0.5
CALR-201ENST00000316448 DAZ1Q9NQZ3 744 aaKnown RBP11.93□□□□□ -0.5
CALR-201ENST00000316448 PRAC2D3DTV9 90 aa11.92□□□□□ -0.5
CALR-201ENST00000316448 S100A2P29034 98 aa11.92□□□□□ -0.5
CALR-201ENST00000316448 CRIP1P50238 77 aa11.92□□□□□ -0.5
CALR-201ENST00000316448 TCF24Q7RTU0 167 aa11.92□□□□□ -0.5
CALR-201ENST00000316448 MRPL53Q96EL3 112 aaKnown RBP11.92□□□□□ -0.5
CALR-201ENST00000316448 C8orf49Q96NF6 230 aa11.92□□□□□ -0.5
CALR-201ENST00000316448 RBAKDNA6NC62 111 aa11.92□□□□□ -0.5
CALR-201ENST00000316448 HAX1O00165 279 aa11.92□□□□□ -0.5
CALR-201ENST00000316448 KLF5Q13887 457 aaPredicted RBP11.92□□□□□ -0.5
CALR-201ENST00000316448 KHDC1LQ5JSQ8 128 aa11.92□□□□□ -0.5
CALR-201ENST00000316448 PRR25Q96S07 402 aa11.92□□□□□ -0.5
CALR-201ENST00000316448 VGLL1Q99990 258 aa11.92□□□□□ -0.5
CALR-201ENST00000316448 SAPCD1Q5SSQ6 148 aa11.91□□□□□ -0.5
CALR-201ENST00000316448 ADAMTSL5Q6ZMM2 481 aa11.91□□□□□ -0.5
CALR-201ENST00000316448 REC114Q7Z4M0 266 aa11.91□□□□□ -0.5
CALR-201ENST00000316448 OR2D3Q8NGH3 330 aa11.91□□□□□ -0.5
CALR-201ENST00000316448 C4orf3Q8WVX3 66 aa11.91□□□□□ -0.5
CALR-201ENST00000316448 CRLF1O75462 422 aa11.9□□□□□ -0.5
CALR-201ENST00000316448 NDUFA7O95182 113 aa11.9□□□□□ -0.5
CALR-201ENST00000316448 CT45A10P0DMU9 189 aa11.9□□□□□ -0.5
CALR-201ENST00000316448 FABP4P15090 132 aa11.9□□□□□ -0.5
CALR-201ENST00000316448 FOXA3P55318 350 aaPredicted RBP11.9□□□□□ -0.5
CALR-201ENST00000316448 RBPMS2Q6ZRY4 209 aaKnown RBP11.9□□□□□ -0.5
CALR-201ENST00000316448 KLHL30-AS1Q8NEE0 82 aa11.9□□□□□ -0.5
CALR-201ENST00000316448 OR11H1Q8NG94 326 aa11.9□□□□□ -0.5
CALR-201ENST00000316448 Q8TAT8 98 aa11.9□□□□□ -0.5
CALR-201ENST00000316448 C20orf173Q96LM9 149 aa11.9□□□□□ -0.5
CALR-201ENST00000316448 UFC1Q9Y3C8 167 aa11.9□□□□□ -0.5
CALR-201ENST00000316448 BAHCC1Q9P281 2608 aa11.9□□□□□ -0.5
CALR-201ENST00000316448 NSD1Q96L73 2696 aaPredicted RBP11.9□□□□□ -0.5
CALR-201ENST00000316448 A0A1W2PS18 150 aa11.9□□□□□ -0.51
CALR-201ENST00000316448 LGALS9O00182 355 aa11.9□□□□□ -0.51
CALR-201ENST00000316448 SOCS3O14543 225 aa11.9□□□□□ -0.51
CALR-201ENST00000316448 AMBPP02760 352 aa11.9□□□□□ -0.51
CALR-201ENST00000316448 GDF5OSQ5U4N7 250 aa11.9□□□□□ -0.51
CALR-201ENST00000316448 OR1N2Q8NGR9 330 aa11.9□□□□□ -0.51
CALR-201ENST00000316448 CITED2Q99967 270 aaPredicted RBP11.9□□□□□ -0.51
CALR-201ENST00000316448 IGKV3-7A0A075B6H7 116 aa11.89□□□□□ -0.51
CALR-201ENST00000316448 A0A1B0GUS0 222 aa11.89□□□□□ -0.51
CALR-201ENST00000316448 GRIFINA4D1Z8 144 aa11.89□□□□□ -0.51
CALR-201ENST00000316448 A8MWP6 167 aa11.89□□□□□ -0.51
CALR-201ENST00000316448 LINC01619G3V211 115 aa11.89□□□□□ -0.51
CALR-201ENST00000316448 CRISP2P16562 243 aa11.89□□□□□ -0.51
CALR-201ENST00000316448 OR10D4PQ8NGN7 298 aa11.89□□□□□ -0.51
CALR-201ENST00000316448 PACRGQ96M98 296 aaPredicted RBP11.89□□□□□ -0.51
CALR-201ENST00000316448 JMJD8Q96S16 334 aa11.89□□□□□ -0.51
CALR-201ENST00000316448 CLEC5AQ9NY25 188 aa11.89□□□□□ -0.51
CALR-201ENST00000316448 TP53TG3Q9ULZ0 132 aa11.89□□□□□ -0.51
CALR-201ENST00000316448 A0A1W2PRX2 142 aa11.88□□□□□ -0.51
CALR-201ENST00000316448 PROK1P58294 105 aa11.88□□□□□ -0.51
CALR-201ENST00000316448 KRTAP10-3P60369 221 aa11.88□□□□□ -0.51
CALR-201ENST00000316448 RAB4BP61018 213 aa11.88□□□□□ -0.51
CALR-201ENST00000316448 HBBP68871 147 aa11.88□□□□□ -0.51
CALR-201ENST00000316448 SLAQ13239 276 aa11.88□□□□□ -0.51
CALR-201ENST00000316448 FAM162BQ5T6X4 162 aa11.88□□□□□ -0.51
CALR-201ENST00000316448 RNF114Q9Y508 228 aa11.88□□□□□ -0.51
CALR-201ENST00000316448 TCF21O43680 179 aa11.88□□□□□ -0.51
CALR-201ENST00000316448 GZMBP10144 247 aa11.88□□□□□ -0.51
CALR-201ENST00000316448 LINC00310P59036 64 aa11.88□□□□□ -0.51
CALR-201ENST00000316448 Q0VG73 95 aa11.88□□□□□ -0.51
CALR-201ENST00000316448 ERCC8Q13216 396 aa11.88□□□□□ -0.51
CALR-201ENST00000316448 DLX4Q92988 240 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms