RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 GP9P14770 177 aa12.25□□□□□ -0.45
TUBB3-201ENST00000315491 RPL7P18124 248 aaKnown RBP12.25□□□□□ -0.45
TUBB3-201ENST00000315491 C16orf54Q6UWD8 224 aa12.25□□□□□ -0.45
TUBB3-201ENST00000315491 TMEM256Q8N2U0 113 aa12.25□□□□□ -0.45
TUBB3-201ENST00000315491 OR4F17Q8NGA8 305 aa12.25□□□□□ -0.45
TUBB3-201ENST00000315491 CMTM2Q8TAZ6 248 aa12.25□□□□□ -0.45
TUBB3-201ENST00000315491 OR4F4Q96R69 305 aa12.25□□□□□ -0.45
TUBB3-201ENST00000315491 OVOL1O14753 267 aa12.25□□□□□ -0.45
TUBB3-201ENST00000315491 CHEK1O14757 476 aa12.25□□□□□ -0.45
TUBB3-201ENST00000315491 MRPS12O15235 138 aaKnown RBP12.25□□□□□ -0.45
TUBB3-201ENST00000315491 PF4P02776 101 aa12.25□□□□□ -0.45
TUBB3-201ENST00000315491 OR10J4P0C629 311 aa12.25□□□□□ -0.45
TUBB3-201ENST00000315491 BMI1P35226 326 aa12.25□□□□□ -0.45
TUBB3-201ENST00000315491 UBE2L3P68036 154 aaKnown RBP12.25□□□□□ -0.45
TUBB3-201ENST00000315491 CBLN1P23435 193 aa12.24□□□□□ -0.45
TUBB3-201ENST00000315491 GLMPQ8WWB7 406 aa12.24□□□□□ -0.45
TUBB3-201ENST00000315491 FXYD5Q96DB9 178 aa12.24□□□□□ -0.45
TUBB3-201ENST00000315491 GPR82Q96P67 336 aa12.24□□□□□ -0.45
TUBB3-201ENST00000315491 TMEM167BQ9NRX6 74 aa12.24□□□□□ -0.45
TUBB3-201ENST00000315491 M0QZ24 198 aa12.23□□□□□ -0.45
TUBB3-201ENST00000315491 OR5I1Q13606 314 aa12.23□□□□□ -0.45
TUBB3-201ENST00000315491 SHISA2Q6UWI4 295 aa12.23□□□□□ -0.45
TUBB3-201ENST00000315491 VAMP8Q9BV40 100 aa12.23□□□□□ -0.45
TUBB3-201ENST00000315491 ATRQ13535 2644 aa12.23□□□□□ -0.45
TUBB3-201ENST00000315491 TRAV9-1A0A075B6T8 112 aa12.23□□□□□ -0.45
TUBB3-201ENST00000315491 NUPR1O60356 82 aa12.23□□□□□ -0.45
TUBB3-201ENST00000315491 CSN3P07498 182 aa12.23□□□□□ -0.45
TUBB3-201ENST00000315491 IGLC2P0DOY2 106 aa12.23□□□□□ -0.45
TUBB3-201ENST00000315491 HIST1H1EP10412 219 aaKnown RBP12.23□□□□□ -0.45
TUBB3-201ENST00000315491 Q6ZWC4 215 aa12.23□□□□□ -0.45
TUBB3-201ENST00000315491 ORAOV1Q8WV07 137 aa12.23□□□□□ -0.45
TUBB3-201ENST00000315491 SIGLEC15Q6ZMC9 328 aa12.22□□□□□ -0.45
TUBB3-201ENST00000315491 ADAMTSL5Q6ZMM2 481 aa12.22□□□□□ -0.45
TUBB3-201ENST00000315491 OR4B1Q8NGF8 309 aa12.22□□□□□ -0.45
TUBB3-201ENST00000315491 SMAD5-AS1Q9Y6J3 95 aa12.22□□□□□ -0.45
TUBB3-201ENST00000315491 NBEAP1P0C6P0 100 aa12.21□□□□□ -0.45
TUBB3-201ENST00000315491 LINC00482Q8N8I6 264 aa12.21□□□□□ -0.45
TUBB3-201ENST00000315491 ZNF586Q9NXT0 402 aa12.21□□□□□ -0.45
TUBB3-201ENST00000315491 HELTA6NFD8 242 aa12.2□□□□□ -0.46
TUBB3-201ENST00000315491 ZNF785A8K8V0 405 aa12.2□□□□□ -0.46
TUBB3-201ENST00000315491 RBX1P62877 108 aa12.2□□□□□ -0.46
TUBB3-201ENST00000315491 CST9LP1Q5W188 147 aa12.2□□□□□ -0.46
TUBB3-201ENST00000315491 BLNKQ8WV28 456 aa12.2□□□□□ -0.46
TUBB3-201ENST00000315491 A0A087X0K7 114 aa12.2□□□□□ -0.46
TUBB3-201ENST00000315491 H3BTX0 84 aa12.2□□□□□ -0.46
TUBB3-201ENST00000315491 K7EP13 123 aa12.2□□□□□ -0.46
TUBB3-201ENST00000315491 CDKN1BP46527 198 aa12.2□□□□□ -0.46
TUBB3-201ENST00000315491 UBE2G2P60604 165 aa12.2□□□□□ -0.46
TUBB3-201ENST00000315491 TCF24Q7RTU0 167 aa12.2□□□□□ -0.46
TUBB3-201ENST00000315491 LINC01551Q86U37 167 aa12.2□□□□□ -0.46
TUBB3-201ENST00000315491 SELENOKQ9Y6D0 94 aa12.2□□□□□ -0.46
TUBB3-201ENST00000315491 FBN1P35555 2871 aaKnown RBP12.19□□□□□ -0.46
TUBB3-201ENST00000315491 TRBV19A0A075B6N1 114 aa12.19□□□□□ -0.46
TUBB3-201ENST00000315491 PDE6DO43924 150 aa12.19□□□□□ -0.46
TUBB3-201ENST00000315491 PAGE4O60829 102 aa12.19□□□□□ -0.46
TUBB3-201ENST00000315491 DYNLRB2Q8TF09 96 aa12.19□□□□□ -0.46
TUBB3-201ENST00000315491 C17orf77Q96MU5 243 aa12.19□□□□□ -0.46
TUBB3-201ENST00000315491 SIGLEC8Q9NYZ4 499 aa12.19□□□□□ -0.46
TUBB3-201ENST00000315491 TP53TG3Q9ULZ0 132 aa12.19□□□□□ -0.46
TUBB3-201ENST00000315491 F6UZH7 168 aa12.18□□□□□ -0.46
TUBB3-201ENST00000315491 RPL11P62913 178 aaKnown RBP12.18□□□□□ -0.46
TUBB3-201ENST00000315491 Q0VG73 95 aa12.18□□□□□ -0.46
TUBB3-201ENST00000315491 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.18□□□□□ -0.46
TUBB3-201ENST00000315491 PAM16Q9Y3D7 125 aa12.18□□□□□ -0.46
TUBB3-201ENST00000315491 YTHDF2Q9Y5A9 579 aaKnown RBP12.18□□□□□ -0.46
TUBB3-201ENST00000315491 C20orf202A1L168 122 aa12.18□□□□□ -0.46
TUBB3-201ENST00000315491 CTRLP40313 264 aa12.18□□□□□ -0.46
TUBB3-201ENST00000315491 LINC00310P59036 64 aa12.18□□□□□ -0.46
TUBB3-201ENST00000315491 TDRG1Q3Y452 100 aa12.18□□□□□ -0.46
TUBB3-201ENST00000315491 ARL2-SNX15V9GYD0 113 aa12.18□□□□□ -0.46
TUBB3-201ENST00000315491 A0A1W2PRE2 83 aa12.17□□□□□ -0.46
TUBB3-201ENST00000315491 NDUFB4O95168 129 aa12.17□□□□□ -0.46
TUBB3-201ENST00000315491 PDE6HQ13956 83 aa12.17□□□□□ -0.46
TUBB3-201ENST00000315491 BATFQ16520 125 aa12.17□□□□□ -0.46
TUBB3-201ENST00000315491 TXNDC17Q9BRA2 123 aa12.17□□□□□ -0.46
TUBB3-201ENST00000315491 UQCR10Q9UDW1 63 aa12.17□□□□□ -0.46
TUBB3-201ENST00000315491 IGKV3-7A0A075B6H7 116 aa12.16□□□□□ -0.46
TUBB3-201ENST00000315491 SLC17A3O00476 420 aa12.16□□□□□ -0.46
TUBB3-201ENST00000315491 SAP30O75446 220 aa12.16□□□□□ -0.46
TUBB3-201ENST00000315491 DEFB114Q30KQ6 69 aa12.16□□□□□ -0.46
TUBB3-201ENST00000315491 OR2D3Q8NGH3 330 aa12.16□□□□□ -0.46
TUBB3-201ENST00000315491 MDFIQ99750 246 aa12.16□□□□□ -0.46
TUBB3-201ENST00000315491 C11orf94C9JXX5 98 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 ZNF253O75346 499 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 CRISP2P16562 243 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 ATP5G3P48201 142 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 RIPPLY3P57055 190 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 Q8N976 141 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 Q9H3A6 140 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 NRN1Q9NPD7 142 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 GGTLC3B5MD39 225 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 SERF1AO75920 110 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 TFPI2P48307 235 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 PSG9Q00887 426 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 LYPD1Q8N2G4 141 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 RNASE8Q8TDE3 154 aaKnown RBP12.15□□□□□ -0.46
TUBB3-201ENST00000315491 SFRP2Q96HF1 295 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 SLC50A1Q9BRV3 221 aa12.15□□□□□ -0.46
TUBB3-201ENST00000315491 SUMO1P63165 101 aaKnown RBP12.14□□□□□ -0.47
TUBB3-201ENST00000315491 CD300EQ496F6 205 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms