RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 FMC1Q96HJ9 113 aa9.64□□□□□ -0.87
RNF4-201ENST00000314289 APOHP02749 345 aaPredicted RBP9.63□□□□□ -0.87
RNF4-201ENST00000314289 ZNF502Q8TBZ5 544 aa9.63□□□□□ -0.87
RNF4-201ENST00000314289 URB1-AS1Q96HZ7 61 aa9.63□□□□□ -0.87
RNF4-201ENST00000314289 IGKV2-40A0A087WW87 121 aaPredicted RBP9.63□□□□□ -0.87
RNF4-201ENST00000314289 IGKV2D-40P01614 121 aaPredicted RBP9.63□□□□□ -0.87
RNF4-201ENST00000314289 COX6B1P14854 86 aa9.63□□□□□ -0.87
RNF4-201ENST00000314289 PGLYRP4Q96LB8 373 aa9.63□□□□□ -0.87
RNF4-201ENST00000314289 PMCHL2Q9BQD1 86 aa9.63□□□□□ -0.87
RNF4-201ENST00000314289 MOB4Q9Y3A3 225 aa9.63□□□□□ -0.87
RNF4-201ENST00000314289 PRRC2AP48634 2157 aaKnown RBP9.63□□□□□ -0.87
RNF4-201ENST00000314289 LOC102724200A0A096LPH7 203 aaPredicted RBP9.62□□□□□ -0.87
RNF4-201ENST00000314289 K7EP13 123 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 NDUFS8O00217 210 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 P01737 135 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 IGHV3-11P01762 117 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 CDKN1BP46527 198 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 KLF5Q13887 457 aaPredicted RBP9.62□□□□□ -0.87
RNF4-201ENST00000314289 RASL11AQ6T310 242 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 ZC2HC1AQ96GY0 325 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 C8orf49Q96NF6 230 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 RABAC1Q9UI14 185 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 SMAD5-AS1Q9Y6J3 95 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 SETD2Q9BYW2 2564 aaPredicted RBP9.62□□□□□ -0.87
RNF4-201ENST00000314289 TRAV41A0A0B4J266 112 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 ZNF138P52744 262 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 GTSF1Q8WW33 167 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 DAZAP1Q96EP5 407 aaKnown RBP9.62□□□□□ -0.87
RNF4-201ENST00000314289 VPS25Q9BRG1 176 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 MUC21A0A0G2JKD1 596 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 MUC21A0A140T8X8 626 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 ZNF785A8K8V0 405 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 LEPROTL1O95214 131 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 TRBV12-3P01733 135 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 TMEM95Q3KNT9 176 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 MUC21Q5SSG8 566 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 FAM231DQ6ZW35 169 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 Q8TAT8 98 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 TPPP3Q9BW30 176 aa9.62□□□□□ -0.87
RNF4-201ENST00000314289 HELZ2Q9BYK8 2649 aaKnown RBP9.61□□□□□ -0.87
RNF4-201ENST00000314289 IGHV1-24A0A0C4DH33 117 aa9.61□□□□□ -0.87
RNF4-201ENST00000314289 HBBP68871 147 aa9.61□□□□□ -0.87
RNF4-201ENST00000314289 RNF182Q8N6D2 247 aa9.61□□□□□ -0.87
RNF4-201ENST00000314289 ARL6IP6Q8N6S5 226 aa9.61□□□□□ -0.87
RNF4-201ENST00000314289 RPP21Q9H633 154 aaKnown RBP9.61□□□□□ -0.87
RNF4-201ENST00000314289 TMSB15BA0A087X1C1 80 aa9.61□□□□□ -0.87
RNF4-201ENST00000314289 SYS1-DBNDD2H3BUS1 97 aa9.61□□□□□ -0.87
RNF4-201ENST00000314289 TRGV3P03979 118 aa9.61□□□□□ -0.87
RNF4-201ENST00000314289 CSN3P07498 182 aa9.61□□□□□ -0.87
RNF4-201ENST00000314289 AAMDCQ9H7C9 122 aa9.61□□□□□ -0.87
RNF4-201ENST00000314289 PSG8Q9UQ74 426 aa9.61□□□□□ -0.87
RNF4-201ENST00000314289 ACANP16112 2415 aa9.61□□□□□ -0.87
RNF4-201ENST00000314289 RNF223E7ERA6 249 aa9.6□□□□□ -0.87
RNF4-201ENST00000314289 TGFAP01135 160 aa9.6□□□□□ -0.87
RNF4-201ENST00000314289 ZNF48Q96MX3 618 aaPredicted RBP9.6□□□□□ -0.87
RNF4-201ENST00000314289 KLK15Q9H2R5 256 aa9.6□□□□□ -0.87
RNF4-201ENST00000314289 B4DSR2 109 aa9.6□□□□□ -0.87
RNF4-201ENST00000314289 HSBP1L1C9JCN9 74 aa9.6□□□□□ -0.87
RNF4-201ENST00000314289 TAX1BP3O14907 124 aa9.6□□□□□ -0.87
RNF4-201ENST00000314289 HIST2H2BCQ6DN03 193 aa9.6□□□□□ -0.87
RNF4-201ENST00000314289 SLC25A34Q6PIV7 304 aa9.6□□□□□ -0.87
RNF4-201ENST00000314289 NF1P21359 2839 aa9.6□□□□□ -0.87
RNF4-201ENST00000314289 SNAI2O43623 268 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 AMMECR1LQ6DCA0 310 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 ZFAND3Q9H8U3 227 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 ITPR3Q14573 2671 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 A0A087X0K7 114 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 C19orf71A6NCJ1 209 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 PSG3Q16557 428 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 BVES-AS1Q5T3Y7 98 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 ST20Q9HBF5 79 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 A0A1B0GXF2 115 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 RPL7P18124 248 aaKnown RBP9.59□□□□□ -0.87
RNF4-201ENST00000314289 S100A7P31151 101 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 CRIP1P50238 77 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 ATP5G2Q06055 141 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 EEF1AKMT3Q96AZ1 226 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 VGLL1Q99990 258 aa9.59□□□□□ -0.87
RNF4-201ENST00000314289 CLPSL1A2RUU4 121 aa9.58□□□□□ -0.88
RNF4-201ENST00000314289 CHEK1O14757 476 aa9.58□□□□□ -0.88
RNF4-201ENST00000314289 PRSS22Q9GZN4 317 aa9.58□□□□□ -0.88
RNF4-201ENST00000314289 TMEM191AQ9H0A3 160 aa9.58□□□□□ -0.88
RNF4-201ENST00000314289 MEGF9Q9H1U4 602 aa9.58□□□□□ -0.88
RNF4-201ENST00000314289 ITPR2Q14571 2701 aa9.58□□□□□ -0.88
RNF4-201ENST00000314289 FLNAP21333 2647 aaKnown RBP9.58□□□□□ -0.88
RNF4-201ENST00000314289 IGHV4-59P01825 116 aa9.58□□□□□ -0.88
RNF4-201ENST00000314289 PF4V1P10720 104 aa9.58□□□□□ -0.88
RNF4-201ENST00000314289 ATP5L2Q7Z4Y8 100 aa9.58□□□□□ -0.88
RNF4-201ENST00000314289 CST9LQ9H4G1 147 aa9.58□□□□□ -0.88
RNF4-201ENST00000314289 PRAC2D3DTV9 90 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 BUB3O43684 328 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 GOSR1O95249 250 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 ERCC8Q13216 396 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 IGKV3-7A0A075B6H7 116 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 K7EQM0 130 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 SCGB2A1O75556 95 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 IGHG4P01861 327 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 UNQ9165/PRO28630Q6UXU0 137 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 SORL1Q92673 2214 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 A8MWL6 223 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms