RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 HTN3P15516 51 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 CD300CQ08708 224 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 FAM122CQ6P4D5 195 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 ZNF493Q6ZR52 646 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 POM121L12Q8N7R1 296 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 AQP10Q96PS8 301 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 TRAV12-3A0A0B4J271 114 aa10.25□□□□□ -0.77
PPP1CA-201ENST00000312989 DEFB130BP0DP73 79 aa10.25□□□□□ -0.77
PPP1CA-201ENST00000312989 DEFB130AP0DP74 79 aa10.25□□□□□ -0.77
PPP1CA-201ENST00000312989 LEPP41159 167 aa10.25□□□□□ -0.77
PPP1CA-201ENST00000312989 BTN1A1Q13410 526 aa10.25□□□□□ -0.77
PPP1CA-201ENST00000312989 C11orf72Q8NBR9 251 aa10.25□□□□□ -0.77
PPP1CA-201ENST00000312989 LINC00477Q96M19 166 aa10.25□□□□□ -0.77
PPP1CA-201ENST00000312989 LINC00467Q9BRT7 94 aa10.25□□□□□ -0.77
PPP1CA-201ENST00000312989 NOP10Q9NPE3 64 aaKnown RBP10.25□□□□□ -0.77
PPP1CA-201ENST00000312989 TIMM8BQ9Y5J9 83 aaPredicted RBP10.25□□□□□ -0.77
PPP1CA-201ENST00000312989 RNF222A6NCQ9 220 aa10.24□□□□□ -0.77
PPP1CA-201ENST00000312989 IFNA5P01569 189 aa10.24□□□□□ -0.77
PPP1CA-201ENST00000312989 SLC25A5P05141 298 aaKnown RBP10.24□□□□□ -0.77
PPP1CA-201ENST00000312989 P0DMU3 169 aa10.24□□□□□ -0.77
PPP1CA-201ENST00000312989 FAM231AP0DMU4 169 aa10.24□□□□□ -0.77
PPP1CA-201ENST00000312989 FAM231CP0DMU5 169 aa10.24□□□□□ -0.77
PPP1CA-201ENST00000312989 HTN1P15515 57 aa10.24□□□□□ -0.77
PPP1CA-201ENST00000312989 RAB2AP61019 212 aa10.24□□□□□ -0.77
PPP1CA-201ENST00000312989 MED28Q9H204 178 aa10.24□□□□□ -0.77
PPP1CA-201ENST00000312989 ZNF492Q9P255 531 aa10.24□□□□□ -0.77
PPP1CA-201ENST00000312989 KIAA1109Q2LD37 5005 aa10.23□□□□□ -0.77
PPP1CA-201ENST00000312989 C7orf71A4D174 169 aa10.23□□□□□ -0.77
PPP1CA-201ENST00000312989 CBY3A6NI87 242 aa10.23□□□□□ -0.77
PPP1CA-201ENST00000312989 OR7C2O60412 319 aa10.23□□□□□ -0.77
PPP1CA-201ENST00000312989 NMBP08949 121 aa10.23□□□□□ -0.77
PPP1CA-201ENST00000312989 GIPP09681 153 aaPredicted RBP10.23□□□□□ -0.77
PPP1CA-201ENST00000312989 UBE2L3P68036 154 aaKnown RBP10.23□□□□□ -0.77
PPP1CA-201ENST00000312989 OR2G3Q8NGZ4 309 aa10.23□□□□□ -0.77
PPP1CA-201ENST00000312989 Q8TAT8 98 aa10.23□□□□□ -0.77
PPP1CA-201ENST00000312989 PYGO2Q9BRQ0 406 aa10.23□□□□□ -0.77
PPP1CA-201ENST00000312989 Q9H3A6 140 aa10.23□□□□□ -0.77
PPP1CA-201ENST00000312989 AAMDCQ9H7C9 122 aa10.23□□□□□ -0.77
PPP1CA-201ENST00000312989 M6PRP20645 277 aa10.22□□□□□ -0.77
PPP1CA-201ENST00000312989 RANP62826 216 aaKnown RBP10.22□□□□□ -0.77
PPP1CA-201ENST00000312989 KHDC3LQ587J8 217 aa10.22□□□□□ -0.77
PPP1CA-201ENST00000312989 LYPD1Q8N2G4 141 aa10.22□□□□□ -0.77
PPP1CA-201ENST00000312989 SCGB1C1Q8TD33 95 aa10.22□□□□□ -0.77
PPP1CA-201ENST00000312989 TRBV7-9A0A0J9YWB2 115 aa10.21□□□□□ -0.78
PPP1CA-201ENST00000312989 ATP5G1P05496 136 aa10.21□□□□□ -0.78
PPP1CA-201ENST00000312989 HOXA5P20719 270 aa10.21□□□□□ -0.78
PPP1CA-201ENST00000312989 ATP5G3P48201 142 aa10.21□□□□□ -0.78
PPP1CA-201ENST00000312989 DAZ2Q13117 558 aaKnown RBP10.21□□□□□ -0.78
PPP1CA-201ENST00000312989 Q6ZR54 194 aa10.21□□□□□ -0.78
PPP1CA-201ENST00000312989 RBAKDNA6NC62 111 aa10.2□□□□□ -0.78
PPP1CA-201ENST00000312989 DIRC3C9JPN6 131 aa10.2□□□□□ -0.78
PPP1CA-201ENST00000312989 ATP6V0CP27449 155 aa10.2□□□□□ -0.78
PPP1CA-201ENST00000312989 ZNF138P52744 262 aa10.2□□□□□ -0.78
PPP1CA-201ENST00000312989 ANXA2RQ3ZCQ2 193 aa10.2□□□□□ -0.78
PPP1CA-201ENST00000312989 SUN5Q8TC36 379 aa10.2□□□□□ -0.78
PPP1CA-201ENST00000312989 ASB13Q8WXK3 278 aa10.2□□□□□ -0.78
PPP1CA-201ENST00000312989 TP53TG3Q9ULZ0 132 aa10.2□□□□□ -0.78
PPP1CA-201ENST00000312989 TNFSF18Q9UNG2 199 aa10.2□□□□□ -0.78
PPP1CA-201ENST00000312989 F5H768 121 aa10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 RTL8CO15255 209 aa10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 STAG3L2P0CL84 134 aa10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 STAG3L3P0CL85 134 aa10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 RNASE4P34096 147 aaKnown RBP10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 TAS2R45P59539 299 aa10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 ACOT6Q3I5F7 207 aaPredicted RBP10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 RNF212Q495C1 297 aa10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 Q6ZTI0 123 aa10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 SSX7Q7RTT5 188 aa10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 HSD17B11Q8NBQ5 300 aa10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 C18orf15Q96N68 181 aa10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 PSMG3Q9BT73 122 aaPredicted RBP10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 SH3BGRL3Q9H299 93 aa10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 GSN-AS1Q9NRJ2 163 aa10.19□□□□□ -0.78
PPP1CA-201ENST00000312989 GAGE12BA1L429 117 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 HMGB3O15347 200 aaKnown RBP10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 GAGE7O76087 117 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 GAGE12FP0CL80 117 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 GAGE12GP0CL81 117 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 GAGE12IP0CL82 117 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 ZNF266Q14584 549 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 RGS21Q2M5E4 152 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 LGALS9BQ3B8N2 356 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 TMEM78Q5T7P6 136 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 PQLC2Q6ZP29 291 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 C15orf53Q8NAA6 179 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 OR10G4Q8NGN3 311 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 OR10G9Q8NGN4 311 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 OR10G7Q8NGN6 311 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 TVP23CQ96ET8 276 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 KLF12Q9Y4X4 402 aa10.18□□□□□ -0.78
PPP1CA-201ENST00000312989 A0A1B0GVY2 172 aa10.17□□□□□ -0.78
PPP1CA-201ENST00000312989 GPX1P07203 203 aa10.17□□□□□ -0.78
PPP1CA-201ENST00000312989 TCL1AP56279 114 aa10.17□□□□□ -0.78
PPP1CA-201ENST00000312989 CCDC28AQ8IWP9 274 aa10.17□□□□□ -0.78
PPP1CA-201ENST00000312989 EIF4E3Q8N5X7 224 aaKnown RBP10.17□□□□□ -0.78
PPP1CA-201ENST00000312989 TMPRSS5Q9H3S3 457 aa10.17□□□□□ -0.78
PPP1CA-201ENST00000312989 OTORQ9NRC9 128 aa10.17□□□□□ -0.78
PPP1CA-201ENST00000312989 SPINK4O60575 86 aa10.16□□□□□ -0.78
PPP1CA-201ENST00000312989 ARL14EPLP0DKL9 152 aa10.16□□□□□ -0.78
PPP1CA-201ENST00000312989 ZNF726P1Q15940 193 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms