RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 TAS2R60P59551 318 aa12.79□□□□□ -0.36
CCS-201ENST00000310190 AKR1C8PQ5T2L2 129 aa12.79□□□□□ -0.36
CCS-201ENST00000310190 TMUB2Q71RG4 321 aa12.79□□□□□ -0.36
CCS-201ENST00000310190 LINC00467Q9BRT7 94 aa12.79□□□□□ -0.36
CCS-201ENST00000310190 ZNF492Q9P255 531 aa12.79□□□□□ -0.36
CCS-201ENST00000310190 SERTM2A0A1B0GWG4 89 aa12.78□□□□□ -0.36
CCS-201ENST00000310190 NUPR2A6NF83 97 aa12.78□□□□□ -0.36
CCS-201ENST00000310190 DIRC3C9JPN6 131 aa12.78□□□□□ -0.36
CCS-201ENST00000310190 H7BYZ3 331 aa12.78□□□□□ -0.36
CCS-201ENST00000310190 RRN3P1Q2M238 152 aa12.78□□□□□ -0.36
CCS-201ENST00000310190 LGALSLQ3ZCW2 172 aaPredicted RBP12.78□□□□□ -0.36
CCS-201ENST00000310190 TMEM78Q5T7P6 136 aa12.78□□□□□ -0.36
CCS-201ENST00000310190 DPPA3Q6W0C5 159 aa12.78□□□□□ -0.36
CCS-201ENST00000310190 SSX7Q7RTT5 188 aa12.78□□□□□ -0.36
CCS-201ENST00000310190 BAP18Q8IXM2 172 aa12.78□□□□□ -0.36
CCS-201ENST00000310190 A0A1W2PRE2 83 aa12.77□□□□□ -0.37
CCS-201ENST00000310190 ZNF138P52744 262 aa12.77□□□□□ -0.37
CCS-201ENST00000310190 GFI1BQ5VTD9 330 aa12.77□□□□□ -0.37
CCS-201ENST00000310190 CEMP1Q6PRD7 247 aaPredicted RBP12.77□□□□□ -0.37
CCS-201ENST00000310190 ZNF493Q6ZR52 646 aa12.77□□□□□ -0.37
CCS-201ENST00000310190 AKAP14Q86UN6 197 aa12.77□□□□□ -0.37
CCS-201ENST00000310190 TRAV12-2A0A075B6T6 113 aa12.76□□□□□ -0.37
CCS-201ENST00000310190 PGPA6NDG6 321 aa12.76□□□□□ -0.37
CCS-201ENST00000310190 C11orf94C9JXX5 98 aa12.76□□□□□ -0.37
CCS-201ENST00000310190 ZNF324O75467 553 aaPredicted RBP12.76□□□□□ -0.37
CCS-201ENST00000310190 ZFAND2AQ8N6M9 145 aa12.76□□□□□ -0.37
CCS-201ENST00000310190 MBD3L1Q8WWY6 194 aa12.76□□□□□ -0.37
CCS-201ENST00000310190 VGLL1Q99990 258 aa12.76□□□□□ -0.37
CCS-201ENST00000310190 ZNF471Q9BX82 626 aaPredicted RBP12.76□□□□□ -0.37
CCS-201ENST00000310190 NKX6-2Q9C056 277 aaPredicted RBP12.76□□□□□ -0.37
CCS-201ENST00000310190 ARL2-SNX15V9GYD0 113 aa12.76□□□□□ -0.37
CCS-201ENST00000310190 ALMS1Q8TCU4 4167 aa12.75□□□□□ -0.37
CCS-201ENST00000310190 IGKV2-40A0A087WW87 121 aaPredicted RBP12.75□□□□□ -0.37
CCS-201ENST00000310190 LOC102723971A0A1B0GUV8 181 aa12.75□□□□□ -0.37
CCS-201ENST00000310190 DEFB4AO15263 64 aa12.75□□□□□ -0.37
CCS-201ENST00000310190 HMGB3O15347 200 aaKnown RBP12.75□□□□□ -0.37
CCS-201ENST00000310190 EIF3GO75821 320 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCS-201ENST00000310190 IGKV2D-40P01614 121 aaPredicted RBP12.75□□□□□ -0.37
CCS-201ENST00000310190 TPT1P13693 172 aaKnown RBP12.75□□□□□ -0.37
CCS-201ENST00000310190 ERCC8Q13216 396 aa12.75□□□□□ -0.37
CCS-201ENST00000310190 ZFAND6Q6FIF0 208 aa12.75□□□□□ -0.37
CCS-201ENST00000310190 C5orf17Q8NAS9 161 aa12.75□□□□□ -0.37
CCS-201ENST00000310190 PYGO2Q9BRQ0 406 aa12.75□□□□□ -0.37
CCS-201ENST00000310190 TMEM208Q9BTX3 173 aa12.75□□□□□ -0.37
CCS-201ENST00000310190 PLA2G2EQ9NZK7 142 aa12.75□□□□□ -0.37
CCS-201ENST00000310190 DKK2Q9UBU2 259 aa12.75□□□□□ -0.37
CCS-201ENST00000310190 PLAC8L1A1L4L8 177 aa12.74□□□□□ -0.37
CCS-201ENST00000310190 CXorf65A6NEN9 183 aa12.74□□□□□ -0.37
CCS-201ENST00000310190 FBLL1A6NHQ2 334 aaKnown RBP12.74□□□□□ -0.37
CCS-201ENST00000310190 SPART-AS1P0CW21 52 aa12.74□□□□□ -0.37
CCS-201ENST00000310190 KIR3DS1Q14943 382 aa12.74□□□□□ -0.37
CCS-201ENST00000310190 CMTM2Q8TAZ6 248 aa12.74□□□□□ -0.37
CCS-201ENST00000310190 PHLDA1Q8WV24 401 aaPredicted RBP12.74□□□□□ -0.37
CCS-201ENST00000310190 IGHV3OR16-12A0A075B7B8 117 aa12.73□□□□□ -0.37
CCS-201ENST00000310190 C7orf71A4D174 169 aa12.73□□□□□ -0.37
CCS-201ENST00000310190 LYRM9A8MSI8 78 aa12.73□□□□□ -0.37
CCS-201ENST00000310190 PFDN1O60925 122 aa12.73□□□□□ -0.37
CCS-201ENST00000310190 FHITP49789 147 aa12.73□□□□□ -0.37
CCS-201ENST00000310190 TCTAP57738 103 aa12.73□□□□□ -0.37
CCS-201ENST00000310190 NANOS2P60321 138 aaKnown RBP12.73□□□□□ -0.37
CCS-201ENST00000310190 C12orf74Q32Q52 190 aa12.73□□□□□ -0.37
CCS-201ENST00000310190 RNASE8Q8TDE3 154 aaKnown RBP12.73□□□□□ -0.37
CCS-201ENST00000310190 TMEM263Q8WUH6 116 aaKnown RBP12.73□□□□□ -0.37
CCS-201ENST00000310190 C16orf74Q96GX8 76 aa12.73□□□□□ -0.37
CCS-201ENST00000310190 LINC01587Q99440 93 aa12.73□□□□□ -0.37
CCS-201ENST00000310190 CELA1Q9UNI1 258 aa12.73□□□□□ -0.37
CCS-201ENST00000310190 RAB5CP51148 216 aa12.72□□□□□ -0.37
CCS-201ENST00000310190 EIF5AL1Q6IS14 154 aaKnown RBP12.72□□□□□ -0.37
CCS-201ENST00000310190 SLC51BQ86UW2 128 aa12.72□□□□□ -0.37
CCS-201ENST00000310190 TCEAL7Q9BRU2 100 aa12.72□□□□□ -0.37
CCS-201ENST00000310190 NIPSNAP3BQ9BS92 247 aa12.72□□□□□ -0.37
CCS-201ENST00000310190 KLK5Q9Y337 293 aaPredicted RBP12.72□□□□□ -0.37
CCS-201ENST00000310190 MAP1LC3B2A6NCE7 125 aa12.71□□□□□ -0.37
CCS-201ENST00000310190 ZNF705GA8MUZ8 300 aaPredicted RBP12.71□□□□□ -0.37
CCS-201ENST00000310190 GGTLC3B5MD39 225 aa12.71□□□□□ -0.37
CCS-201ENST00000310190 TCRAP04437 139 aa12.71□□□□□ -0.37
CCS-201ENST00000310190 PRB4P10163 310 aaPredicted RBP12.71□□□□□ -0.37
CCS-201ENST00000310190 ANXA2RQ3ZCQ2 193 aa12.71□□□□□ -0.37
CCS-201ENST00000310190 Q6AWC8 147 aa12.71□□□□□ -0.37
CCS-201ENST00000310190 MAP1LC3BQ9GZQ8 125 aa12.71□□□□□ -0.37
CCS-201ENST00000310190 EPDR1Q9UM22 224 aa12.71□□□□□ -0.37
CCS-201ENST00000310190 YTHDF2Q9Y5A9 579 aaKnown RBP12.71□□□□□ -0.37
CCS-201ENST00000310190 VPS13DQ5THJ4 4388 aa12.71□□□□□ -0.37
CCS-201ENST00000310190 TRAV10A0A0B4J240 114 aa12.7□□□□□ -0.38
CCS-201ENST00000310190 TRAV1-1A0A0B4J248 108 aa12.7□□□□□ -0.38
CCS-201ENST00000310190 GPX1P07203 203 aa12.7□□□□□ -0.38
CCS-201ENST00000310190 AZU1P20160 251 aa12.7□□□□□ -0.38
CCS-201ENST00000310190 SUMO1P63165 101 aaKnown RBP12.7□□□□□ -0.38
CCS-201ENST00000310190 CCDC28AQ8IWP9 274 aa12.7□□□□□ -0.38
CCS-201ENST00000310190 TP53TG3Q9ULZ0 132 aa12.7□□□□□ -0.38
CCS-201ENST00000310190 TRAV12-3A0A0B4J271 114 aa12.69□□□□□ -0.38
CCS-201ENST00000310190 FAM74A7A6NL05 159 aa12.69□□□□□ -0.38
CCS-201ENST00000310190 CD300CQ08708 224 aa12.69□□□□□ -0.38
CCS-201ENST00000310190 FAM222AQ5U5X8 452 aa12.69□□□□□ -0.38
CCS-201ENST00000310190 Q6ZTC4 211 aa12.69□□□□□ -0.38
CCS-201ENST00000310190 C9orf62Q8N4C0 152 aa12.69□□□□□ -0.38
CCS-201ENST00000310190 LINC00612Q8N6U2 182 aa12.69□□□□□ -0.38
CCS-201ENST00000310190 ATG101Q9BSB4 218 aa12.69□□□□□ -0.38
CCS-201ENST00000310190 hCG_2014768A0A024R1R8 64 aa12.68□□□□□ -0.38
CCS-201ENST00000310190 A0A1B0GVG6 124 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms