RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 FCN3O75636 299 aa10.08□□□□□ -0.8
RETREG3-201ENST00000309428 PAX1P15863 534 aa10.08□□□□□ -0.8
RETREG3-201ENST00000309428 PPP1R27Q86WC6 154 aa10.08□□□□□ -0.8
RETREG3-201ENST00000309428 JMJD8Q96S16 334 aa10.08□□□□□ -0.8
RETREG3-201ENST00000309428 CYSLTR1Q9Y271 337 aa10.08□□□□□ -0.8
RETREG3-201ENST00000309428 TSSC4Q9Y5U2 329 aaPredicted RBP10.08□□□□□ -0.8
RETREG3-201ENST00000309428 FAM120AOSQ5T036 256 aa10.07□□□□□ -0.8
RETREG3-201ENST00000309428 Q86TA4 180 aa10.07□□□□□ -0.8
RETREG3-201ENST00000309428 TTC9CQ8N5M4 171 aa10.07□□□□□ -0.8
RETREG3-201ENST00000309428 OTORQ9NRC9 128 aa10.07□□□□□ -0.8
RETREG3-201ENST00000309428 LOXL1Q08397 574 aaPredicted RBP10.07□□□□□ -0.8
RETREG3-201ENST00000309428 SP5Q6BEB4 398 aaPredicted RBP10.07□□□□□ -0.8
RETREG3-201ENST00000309428 Q8N976 141 aa10.07□□□□□ -0.8
RETREG3-201ENST00000309428 FAM167A-AS1Q96KT0 104 aa10.07□□□□□ -0.8
RETREG3-201ENST00000309428 CSTL1Q9H114 145 aa10.07□□□□□ -0.8
RETREG3-201ENST00000309428 RNF125Q96EQ8 232 aa10.06□□□□□ -0.8
RETREG3-201ENST00000309428 TEX48A0A1B0GUV7 120 aa10.06□□□□□ -0.8
RETREG3-201ENST00000309428 OR11H12B2RN74 326 aa10.06□□□□□ -0.8
RETREG3-201ENST00000309428 COX8AP10176 69 aa10.06□□□□□ -0.8
RETREG3-201ENST00000309428 SH2D6Q7Z4S9 175 aa10.06□□□□□ -0.8
RETREG3-201ENST00000309428 TMEM219Q86XT9 240 aa10.06□□□□□ -0.8
RETREG3-201ENST00000309428 OR11H1Q8NG94 326 aa10.06□□□□□ -0.8
RETREG3-201ENST00000309428 OR11H2Q8NH07 326 aa10.06□□□□□ -0.8
RETREG3-201ENST00000309428 C8orf46Q8TAG6 207 aa10.06□□□□□ -0.8
RETREG3-201ENST00000309428 IGF2BP2-AS1Q96M15 143 aa10.06□□□□□ -0.8
RETREG3-201ENST00000309428 RAI1Q7Z5J4 1906 aaPredicted RBP10.06□□□□□ -0.8
RETREG3-201ENST00000309428 SMAD7O15105 426 aaKnown RBP10.06□□□□□ -0.8
RETREG3-201ENST00000309428 RASL11AQ6T310 242 aa10.06□□□□□ -0.8
RETREG3-201ENST00000309428 SOX21Q9Y651 276 aaPredicted RBP10.06□□□□□ -0.8
RETREG3-201ENST00000309428 A0A1B0GV72 72 aa10.05□□□□□ -0.8
RETREG3-201ENST00000309428 H3BMG7 143 aa10.05□□□□□ -0.8
RETREG3-201ENST00000309428 LGALS7P47929 136 aa10.05□□□□□ -0.8
RETREG3-201ENST00000309428 TMPRSS3P57727 454 aa10.05□□□□□ -0.8
RETREG3-201ENST00000309428 LY6EQ16553 131 aa10.05□□□□□ -0.8
RETREG3-201ENST00000309428 FAM71F2Q6NXP2 309 aa10.05□□□□□ -0.8
RETREG3-201ENST00000309428 NDUFA4L2Q9NRX3 87 aa10.05□□□□□ -0.8
RETREG3-201ENST00000309428 TOMM40O96008 361 aa10.05□□□□□ -0.8
RETREG3-201ENST00000309428 IGHV1-3A0A0C4DH29 117 aa10.05□□□□□ -0.8
RETREG3-201ENST00000309428 SHISA9B4DS77 424 aa10.05□□□□□ -0.8
RETREG3-201ENST00000309428 ZNF747Q9BV97 191 aa10.05□□□□□ -0.8
RETREG3-201ENST00000309428 SIGLEC8Q9NYZ4 499 aa10.05□□□□□ -0.8
RETREG3-201ENST00000309428 C9orf118A6NHY6 69 aa10.04□□□□□ -0.8
RETREG3-201ENST00000309428 C22orf46C9J442 243 aa10.04□□□□□ -0.8
RETREG3-201ENST00000309428 GATA1P15976 413 aaPredicted RBP10.04□□□□□ -0.8
RETREG3-201ENST00000309428 TMEM249Q2WGJ8 235 aa10.04□□□□□ -0.8
RETREG3-201ENST00000309428 TRAV40A0A0B4J280 105 aa10.04□□□□□ -0.8
RETREG3-201ENST00000309428 BMI1P35226 326 aa10.04□□□□□ -0.8
RETREG3-201ENST00000309428 SRSF8Q9BRL6 282 aaKnown RBP10.04□□□□□ -0.8
RETREG3-201ENST00000309428 AZU1P20160 251 aa10.04□□□□□ -0.8
RETREG3-201ENST00000309428 GLMPQ8WWB7 406 aa10.04□□□□□ -0.8
RETREG3-201ENST00000309428 ARPC1AQ92747 370 aa10.04□□□□□ -0.8
RETREG3-201ENST00000309428 SMIM17P0DL12 118 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 CGB3P0DN86 165 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 CGB7P0DN87 165 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 ATP5IP56385 69 aaPredicted RBP10.03□□□□□ -0.8
RETREG3-201ENST00000309428 C3orf36Q3SXR2 165 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 IGFL3Q6UXB1 125 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 OR4X2Q8NGF9 303 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 TMEM158Q8WZ71 300 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 RAB1BQ9H0U4 201 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 ZANQ9Y493 2812 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 VWC2LB2RUY7 222 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 SH2D1AO60880 128 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 NPYP01303 97 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 TMEM167AQ8TBQ9 72 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 CEACAM4O75871 244 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 PRSS2P07478 247 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 TMEM78Q5T7P6 136 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 FAM231DQ6ZW35 169 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 CHAC1Q9BUX1 264 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 MSRB1Q9NZV6 116 aa10.03□□□□□ -0.8
RETREG3-201ENST00000309428 IGKV3-20P01619 116 aa10.02□□□□□ -0.8
RETREG3-201ENST00000309428 HLA-DMBP28068 263 aa10.02□□□□□ -0.8
RETREG3-201ENST00000309428 MFAP4P55083 255 aa10.02□□□□□ -0.8
RETREG3-201ENST00000309428 BRD3OSQ6XYD6 125 aa10.02□□□□□ -0.8
RETREG3-201ENST00000309428 SIGLEC9Q9Y336 463 aa10.02□□□□□ -0.8
RETREG3-201ENST00000309428 TRAV26-2A0A0B4J265 109 aa10.02□□□□□ -0.81
RETREG3-201ENST00000309428 GATA4P43694 442 aa10.02□□□□□ -0.81
RETREG3-201ENST00000309428 ERCC8Q13216 396 aa10.02□□□□□ -0.81
RETREG3-201ENST00000309428 FAM74A4Q5TZK3 123 aa10.02□□□□□ -0.81
RETREG3-201ENST00000309428 B9A039 149 aa10.02□□□□□ -0.81
RETREG3-201ENST00000309428 IGKCP01834 107 aa10.02□□□□□ -0.81
RETREG3-201ENST00000309428 MAPK1IP1LQ8NDC0 245 aa10.02□□□□□ -0.81
RETREG3-201ENST00000309428 FASNP49327 2511 aaKnown RBP10.02□□□□□ -0.81
RETREG3-201ENST00000309428 CD300EQ496F6 205 aaPredicted RBP10.01□□□□□ -0.81
RETREG3-201ENST00000309428 OR5A1Q8NGJ0 315 aa10.01□□□□□ -0.81
RETREG3-201ENST00000309428 SCRT2Q9NQ03 307 aa10.01□□□□□ -0.81
RETREG3-201ENST00000309428 ITPR1Q14643 2758 aa10.01□□□□□ -0.81
RETREG3-201ENST00000309428 IGHV3-64A0A075B6Q5 118 aa10.01□□□□□ -0.81
RETREG3-201ENST00000309428 PRSS46E5RG02 174 aa10.01□□□□□ -0.81
RETREG3-201ENST00000309428 K7EP34 96 aa10.01□□□□□ -0.81
RETREG3-201ENST00000309428 IGLC1P0CG04 106 aa10.01□□□□□ -0.81
RETREG3-201ENST00000309428 GAGE13Q4V321 117 aa10.01□□□□□ -0.81
RETREG3-201ENST00000309428 TMEM170BQ5T4T1 132 aa10.01□□□□□ -0.81
RETREG3-201ENST00000309428 NEU4Q8WWR8 484 aaPredicted RBP10.01□□□□□ -0.81
RETREG3-201ENST00000309428 FN1P02751 2386 aaKnown RBP10.01□□□□□ -0.81
RETREG3-201ENST00000309428 MRPL51Q4U2R6 128 aaKnown RBP10.01□□□□□ -0.81
RETREG3-201ENST00000309428 TMEM155Q4W5P6 130 aa10.01□□□□□ -0.81
RETREG3-201ENST00000309428 A0A1W2PPM0 123 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms