RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 CHEK1O14757 476 aa8.15□□□□□ -1.11
APOBEC3F-201ENST00000308521 APOHP02749 345 aaPredicted RBP8.15□□□□□ -1.11
APOBEC3F-201ENST00000308521 SMIM13P0DJ93 91 aa8.15□□□□□ -1.11
APOBEC3F-201ENST00000308521 GP9P14770 177 aa8.15□□□□□ -1.11
APOBEC3F-201ENST00000308521 ZFP36P26651 326 aaKnown RBP8.15□□□□□ -1.11
APOBEC3F-201ENST00000308521 COL8A1P27658 744 aa8.15□□□□□ -1.11
APOBEC3F-201ENST00000308521 SHISA2Q6UWI4 295 aa8.15□□□□□ -1.11
APOBEC3F-201ENST00000308521 ZNF502Q8TBZ5 544 aa8.15□□□□□ -1.11
APOBEC3F-201ENST00000308521 BPESC1Q9GZL8 116 aa8.15□□□□□ -1.11
APOBEC3F-201ENST00000308521 VCX2Q9H322 139 aa8.15□□□□□ -1.11
APOBEC3F-201ENST00000308521 PSG8Q9UQ74 426 aa8.15□□□□□ -1.11
APOBEC3F-201ENST00000308521 ZANQ9Y493 2812 aa8.14□□□□□ -1.11
APOBEC3F-201ENST00000308521 TRBV7-9A0A0J9YWB2 115 aa8.14□□□□□ -1.11
APOBEC3F-201ENST00000308521 ORM2P19652 201 aa8.14□□□□□ -1.11
APOBEC3F-201ENST00000308521 KLRD1Q13241 179 aa8.14□□□□□ -1.11
APOBEC3F-201ENST00000308521 C4orf48Q5BLP8 95 aa8.14□□□□□ -1.11
APOBEC3F-201ENST00000308521 ENSAO43768 121 aaKnown RBP8.14□□□□□ -1.11
APOBEC3F-201ENST00000308521 EFNA4P52798 201 aa8.14□□□□□ -1.11
APOBEC3F-201ENST00000308521 ATP6V0E2Q8NHE4 81 aa8.14□□□□□ -1.11
APOBEC3F-201ENST00000308521 SGK494Q96LW2 274 aa8.14□□□□□ -1.11
APOBEC3F-201ENST00000308521 Q9H3A6 140 aa8.14□□□□□ -1.11
APOBEC3F-201ENST00000308521 OTORQ9NRC9 128 aa8.14□□□□□ -1.11
APOBEC3F-201ENST00000308521 RABAC1Q9UI14 185 aa8.14□□□□□ -1.11
APOBEC3F-201ENST00000308521 ANKRD17O75179 2603 aaKnown RBP8.14□□□□□ -1.11
APOBEC3F-201ENST00000308521 HELZ2Q9BYK8 2649 aaKnown RBP8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 IGHV4-39P01824 125 aa8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 CD24P25063 80 aa8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 VMA21Q3ZAQ7 101 aa8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 C10orf55Q5SWW7 151 aa8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 C8orf46Q8TAG6 207 aa8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 TP73-AS1Q9UF72 201 aa8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 NAV3Q8IVL0 2385 aa8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 A0A1W2PPI3 338 aa8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 OVOL3O00110 214 aa8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 SMAD7O15105 426 aaKnown RBP8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 HOXB4P17483 251 aaPredicted RBP8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 Q86TA4 180 aa8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 TMEM116Q8NCL8 245 aa8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 TMEM14CQ9P0S9 112 aa8.13□□□□□ -1.11
APOBEC3F-201ENST00000308521 A0A1B0GW15 77 aa8.12□□□□□ -1.11
APOBEC3F-201ENST00000308521 IGHV3-48P01763 117 aa8.12□□□□□ -1.11
APOBEC3F-201ENST00000308521 ZNF137PP52743 207 aa8.12□□□□□ -1.11
APOBEC3F-201ENST00000308521 MRGPRG-AS1Q2M3A8 158 aa8.12□□□□□ -1.11
APOBEC3F-201ENST00000308521 C8orf86Q6ZUL3 223 aa8.12□□□□□ -1.11
APOBEC3F-201ENST00000308521 CCL19Q99731 98 aa8.12□□□□□ -1.11
APOBEC3F-201ENST00000308521 TNFRSF18Q9Y5U5 241 aa8.12□□□□□ -1.11
APOBEC3F-201ENST00000308521 CLEC3BP05452 202 aa8.12□□□□□ -1.11
APOBEC3F-201ENST00000308521 OXLD1Q5BKU9 147 aa8.12□□□□□ -1.11
APOBEC3F-201ENST00000308521 SPAG8Q99932 426 aaPredicted RBP8.12□□□□□ -1.11
APOBEC3F-201ENST00000308521 HIGD1BQ9P298 99 aa8.12□□□□□ -1.11
APOBEC3F-201ENST00000308521 HILPDAQ9Y5L2 63 aa8.12□□□□□ -1.11
APOBEC3F-201ENST00000308521 NAV2Q8IVL1 2488 aa8.12□□□□□ -1.11
APOBEC3F-201ENST00000308521 CNTFRP26992 372 aa8.11□□□□□ -1.11
APOBEC3F-201ENST00000308521 RIGQ13278 110 aa8.11□□□□□ -1.11
APOBEC3F-201ENST00000308521 ZC2HC1AQ96GY0 325 aa8.11□□□□□ -1.11
APOBEC3F-201ENST00000308521 CSPG4Q6UVK1 2322 aa8.11□□□□□ -1.11
APOBEC3F-201ENST00000308521 A0A1B0GUT8 65 aa8.11□□□□□ -1.11
APOBEC3F-201ENST00000308521 IGLV1-47P01700 117 aa8.11□□□□□ -1.11
APOBEC3F-201ENST00000308521 IGLV2-11P01706 119 aa8.11□□□□□ -1.11
APOBEC3F-201ENST00000308521 CT45A10P0DMU9 189 aa8.11□□□□□ -1.11
APOBEC3F-201ENST00000308521 PRR31Q5SQ13 230 aa8.11□□□□□ -1.11
APOBEC3F-201ENST00000308521 LY6G5BQ8NDX9 201 aa8.11□□□□□ -1.11
APOBEC3F-201ENST00000308521 PIFOQ8TCI5 191 aa8.11□□□□□ -1.11
APOBEC3F-201ENST00000308521 ZNF747Q9BV97 191 aa8.11□□□□□ -1.11
APOBEC3F-201ENST00000308521 ABCA2Q9BZC7 2435 aa8.1□□□□□ -1.11
APOBEC3F-201ENST00000308521 BUB1B-PAK6H3BSN5 160 aa8.1□□□□□ -1.11
APOBEC3F-201ENST00000308521 IGHG4P01861 327 aa8.1□□□□□ -1.11
APOBEC3F-201ENST00000308521 RUSC1-AS1Q66K80 236 aa8.1□□□□□ -1.11
APOBEC3F-201ENST00000308521 TPSG1Q9NRR2 321 aa8.1□□□□□ -1.11
APOBEC3F-201ENST00000308521 HIGD1AQ9Y241 93 aa8.1□□□□□ -1.11
APOBEC3F-201ENST00000308521 APELAP0DMC3 54 aa8.1□□□□□ -1.11
APOBEC3F-201ENST00000308521 CSN1S1P47710 185 aa8.1□□□□□ -1.11
APOBEC3F-201ENST00000308521 ZNF138P52744 262 aa8.1□□□□□ -1.11
APOBEC3F-201ENST00000308521 AP5S1Q9NUS5 200 aa8.1□□□□□ -1.11
APOBEC3F-201ENST00000308521 INSIG2Q9Y5U4 225 aa8.1□□□□□ -1.11
APOBEC3F-201ENST00000308521 KMT2BQ9UMN6 2715 aaPredicted RBP8.1□□□□□ -1.11
APOBEC3F-201ENST00000308521 HERV-K104P63124 156 aa8.09□□□□□ -1.11
APOBEC3F-201ENST00000308521 CIARTQ8N365 385 aaPredicted RBP8.09□□□□□ -1.11
APOBEC3F-201ENST00000308521 CRYGBP07316 175 aa8.09□□□□□ -1.11
APOBEC3F-201ENST00000308521 SPINK8P0C7L1 97 aa8.09□□□□□ -1.11
APOBEC3F-201ENST00000308521 RPL27AP46776 148 aaKnown RBP8.09□□□□□ -1.11
APOBEC3F-201ENST00000308521 ATP5J2P56134 94 aa8.09□□□□□ -1.11
APOBEC3F-201ENST00000308521 LGALS9BQ3B8N2 356 aa8.09□□□□□ -1.11
APOBEC3F-201ENST00000308521 Q6AWC8 147 aa8.09□□□□□ -1.11
APOBEC3F-201ENST00000308521 LGALS9CQ6DKI2 356 aa8.09□□□□□ -1.11
APOBEC3F-201ENST00000308521 HCP5Q6MZN7 132 aa8.09□□□□□ -1.11
APOBEC3F-201ENST00000308521 TMEM75Q8N9X5 138 aa8.09□□□□□ -1.11
APOBEC3F-201ENST00000308521 RPEQ96AT9 228 aa8.09□□□□□ -1.11
APOBEC3F-201ENST00000308521 SS18L2Q9UHA2 77 aa8.09□□□□□ -1.11
APOBEC3F-201ENST00000308521 APCP25054 2843 aa8.09□□□□□ -1.11
APOBEC3F-201ENST00000308521 CCDC168Q8NDH2 2452 aa8.09□□□□□ -1.12
APOBEC3F-201ENST00000308521 IGHV1-3A0A0C4DH29 117 aa8.08□□□□□ -1.12
APOBEC3F-201ENST00000308521 ZNF785A8K8V0 405 aa8.08□□□□□ -1.12
APOBEC3F-201ENST00000308521 E9PLD3 99 aa8.08□□□□□ -1.12
APOBEC3F-201ENST00000308521 LMO4P61968 165 aa8.08□□□□□ -1.12
APOBEC3F-201ENST00000308521 VMO1Q7Z5L0 202 aa8.08□□□□□ -1.12
APOBEC3F-201ENST00000308521 PRNTQ86SH4 94 aa8.08□□□□□ -1.12
APOBEC3F-201ENST00000308521 ZNF469Q96JG9 3925 aaPredicted RBP8.08□□□□□ -1.12
APOBEC3F-201ENST00000308521 ARL3P36405 182 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms