RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 C8orf49Q96NF6 230 aa12.81□□□□□ -0.36
CCDC8-201ENST00000307522 CSPG4Q6UVK1 2322 aa12.81□□□□□ -0.36
CCDC8-201ENST00000307522 HAX1O00165 279 aa12.81□□□□□ -0.36
CCDC8-201ENST00000307522 FOXI2Q6ZQN5 318 aa12.81□□□□□ -0.36
CCDC8-201ENST00000307522 XGP55808 180 aa12.8□□□□□ -0.36
CCDC8-201ENST00000307522 C2orf83Q53S99 150 aa12.8□□□□□ -0.36
CCDC8-201ENST00000307522 ZC2HC1BQ5TFG8 222 aa12.8□□□□□ -0.36
CCDC8-201ENST00000307522 LYZL1Q6UWQ5 148 aa12.8□□□□□ -0.36
CCDC8-201ENST00000307522 FCN3O75636 299 aa12.8□□□□□ -0.36
CCDC8-201ENST00000307522 GATA1P15976 413 aaPredicted RBP12.8□□□□□ -0.36
CCDC8-201ENST00000307522 ERHP84090 104 aaKnown RBP12.8□□□□□ -0.36
CCDC8-201ENST00000307522 C17orf58Q2M2W7 97 aa12.8□□□□□ -0.36
CCDC8-201ENST00000307522 LGALS9BQ3B8N2 356 aa12.8□□□□□ -0.36
CCDC8-201ENST00000307522 LGALS9CQ6DKI2 356 aa12.8□□□□□ -0.36
CCDC8-201ENST00000307522 C8orf86Q6ZUL3 223 aa12.8□□□□□ -0.36
CCDC8-201ENST00000307522 MRPL20Q9BYC9 149 aaKnown RBP12.8□□□□□ -0.36
CCDC8-201ENST00000307522 S4R3C0 116 aa12.8□□□□□ -0.36
CCDC8-201ENST00000307522 HBDP02042 147 aa12.79□□□□□ -0.36
CCDC8-201ENST00000307522 FOXC2Q99958 501 aa12.79□□□□□ -0.36
CCDC8-201ENST00000307522 MSRB2Q9Y3D2 182 aa12.79□□□□□ -0.36
CCDC8-201ENST00000307522 CNIH1O95406 144 aa12.79□□□□□ -0.36
CCDC8-201ENST00000307522 RIGQ13278 110 aa12.79□□□□□ -0.36
CCDC8-201ENST00000307522 MSRB1Q9NZV6 116 aa12.79□□□□□ -0.36
CCDC8-201ENST00000307522 SSUH2Q9Y2M2 353 aa12.79□□□□□ -0.36
CCDC8-201ENST00000307522 RAI1Q7Z5J4 1906 aaPredicted RBP12.79□□□□□ -0.36
CCDC8-201ENST00000307522 OVOL3O00110 214 aa12.79□□□□□ -0.36
CCDC8-201ENST00000307522 PPP1R35Q8TAP8 253 aa12.79□□□□□ -0.36
CCDC8-201ENST00000307522 GAFA1Q96PS6 74 aa12.79□□□□□ -0.36
CCDC8-201ENST00000307522 MRPL16Q9NX20 251 aaKnown RBP12.79□□□□□ -0.36
CCDC8-201ENST00000307522 C17orf100A8MU93 164 aa12.78□□□□□ -0.36
CCDC8-201ENST00000307522 CKS2P33552 79 aa12.78□□□□□ -0.36
CCDC8-201ENST00000307522 C3orf36Q3SXR2 165 aa12.78□□□□□ -0.36
CCDC8-201ENST00000307522 NFE4Q86UQ8 179 aa12.78□□□□□ -0.36
CCDC8-201ENST00000307522 ZNF714Q96N38 554 aa12.78□□□□□ -0.36
CCDC8-201ENST00000307522 PSG8Q9UQ74 426 aa12.78□□□□□ -0.36
CCDC8-201ENST00000307522 FMC1Q96HJ9 113 aa12.78□□□□□ -0.36
CCDC8-201ENST00000307522 HIST1H4GQ99525 98 aa12.78□□□□□ -0.36
CCDC8-201ENST00000307522 IGLV3-9A0A075B6K5 115 aa12.77□□□□□ -0.36
CCDC8-201ENST00000307522 CRIP1P50238 77 aa12.77□□□□□ -0.36
CCDC8-201ENST00000307522 RITA1Q96K30 269 aa12.77□□□□□ -0.36
CCDC8-201ENST00000307522 KLF12Q9Y4X4 402 aa12.77□□□□□ -0.36
CCDC8-201ENST00000307522 ZANQ9Y493 2812 aa12.77□□□□□ -0.37
CCDC8-201ENST00000307522 TRAV40A0A0B4J280 105 aa12.77□□□□□ -0.37
CCDC8-201ENST00000307522 WI2-2373I1.2A0A1W2PRP0 233 aa12.77□□□□□ -0.37
CCDC8-201ENST00000307522 F8W1H4 67 aa12.77□□□□□ -0.37
CCDC8-201ENST00000307522 MRPL51Q4U2R6 128 aaKnown RBP12.77□□□□□ -0.37
CCDC8-201ENST00000307522 CEND1Q8N111 149 aa12.77□□□□□ -0.37
CCDC8-201ENST00000307522 TMEM75Q8N9X5 138 aa12.77□□□□□ -0.37
CCDC8-201ENST00000307522 LOC107984156A0A0G2JMH3 177 aa12.77□□□□□ -0.37
CCDC8-201ENST00000307522 LEPP41159 167 aa12.77□□□□□ -0.37
CCDC8-201ENST00000307522 C12orf74Q32Q52 190 aa12.77□□□□□ -0.37
CCDC8-201ENST00000307522 ARL17AQ8IVW1 177 aa12.77□□□□□ -0.37
CCDC8-201ENST00000307522 CDIP1Q9H305 208 aa12.77□□□□□ -0.37
CCDC8-201ENST00000307522 PTPN13Q12923 2485 aa12.77□□□□□ -0.37
CCDC8-201ENST00000307522 E9PLD3 99 aa12.76□□□□□ -0.37
CCDC8-201ENST00000307522 CFAP161Q6P656 301 aa12.76□□□□□ -0.37
CCDC8-201ENST00000307522 KIR2DL4Q99706 377 aa12.76□□□□□ -0.37
CCDC8-201ENST00000307522 NPIPB5A8MRT5 1133 aa12.76□□□□□ -0.37
CCDC8-201ENST00000307522 KIR2DS2P43631 304 aa12.76□□□□□ -0.37
CCDC8-201ENST00000307522 ZNF562Q6V9R5 426 aa12.76□□□□□ -0.37
CCDC8-201ENST00000307522 DEFB104AQ8WTQ1 72 aa12.76□□□□□ -0.37
CCDC8-201ENST00000307522 UFC1Q9Y3C8 167 aa12.76□□□□□ -0.37
CCDC8-201ENST00000307522 SOX21Q9Y651 276 aaPredicted RBP12.76□□□□□ -0.37
CCDC8-201ENST00000307522 PRSS29PA6NIE9 313 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 IGLV2-11P01706 119 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 CCDC168Q8NDH2 2452 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 CGB1A6NKQ9 187 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 ENSAO43768 121 aaKnown RBP12.75□□□□□ -0.37
CCDC8-201ENST00000307522 NDUFA3O95167 84 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 LHBP01229 141 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 COX7A1P24310 79 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 TWIST1Q15672 202 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 TCTEX1D4Q5JR98 221 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 IGFL4Q6B9Z1 124 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 OR1L8Q8NGR8 309 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 TRBV20-1A0A075B6N2 111 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 TMEM8BA6NDV4 472 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 GP9P14770 177 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 SLC25A48Q6ZT89 311 aaKnown RBP12.75□□□□□ -0.37
CCDC8-201ENST00000307522 ORMDL3Q8N138 153 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 RNASE6Q93091 150 aaKnown RBP12.75□□□□□ -0.37
CCDC8-201ENST00000307522 ANAPC13Q9BS18 74 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 ZNF492Q9P255 531 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 CYSLTR1Q9Y271 337 aa12.75□□□□□ -0.37
CCDC8-201ENST00000307522 SHISA9B4DS77 424 aa12.74□□□□□ -0.37
CCDC8-201ENST00000307522 H3BVH4 76 aa12.74□□□□□ -0.37
CCDC8-201ENST00000307522 C3orf56Q8N813 242 aa12.74□□□□□ -0.37
CCDC8-201ENST00000307522 CTSZQ9UBR2 303 aa12.74□□□□□ -0.37
CCDC8-201ENST00000307522 PSMB2P49721 201 aa12.74□□□□□ -0.37
CCDC8-201ENST00000307522 NDUFA4L2Q9NRX3 87 aa12.74□□□□□ -0.37
CCDC8-201ENST00000307522 HHLA3Q9XRX5 114 aa12.74□□□□□ -0.37
CCDC8-201ENST00000307522 CT83Q5H943 113 aa12.73□□□□□ -0.37
CCDC8-201ENST00000307522 HERV-K104P63124 156 aa12.73□□□□□ -0.37
CCDC8-201ENST00000307522 ZFP2Q6ZN57 461 aa12.73□□□□□ -0.37
CCDC8-201ENST00000307522 GFRA4Q9GZZ7 299 aa12.73□□□□□ -0.37
CCDC8-201ENST00000307522 KLK15Q9H2R5 256 aa12.73□□□□□ -0.37
CCDC8-201ENST00000307522 USP24Q9UPU5 2620 aa12.73□□□□□ -0.37
CCDC8-201ENST00000307522 FOXI1Q12951 378 aa12.73□□□□□ -0.37
CCDC8-201ENST00000307522 Q8TAT8 98 aa12.73□□□□□ -0.37
CCDC8-201ENST00000307522 SETD2Q9BYW2 2564 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms