RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 HILPDAQ9Y5L2 63 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 D6R8Y8 96 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 KLRD1Q13241 179 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 GUSBP1Q15486 140 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 MRPL20Q9BYC9 149 aaKnown RBP3.24□□□□□ -1.89
USH2A-201ENST00000307340 A0A1W2PRX2 142 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 H3BRN7 92 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 H3BUX3 64 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 ADMP35318 185 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 FUSP35637 526 aaKnown RBP eCLIP3.24□□□□□ -1.89
USH2A-201ENST00000307340 ZNF134P52741 427 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 GCSAMLQ5JQS6 135 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 IGHV3-43A0A0B4J1X8 118 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 IGHV3-43DP0DP04 118 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 TMEM200BQ69YZ2 307 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 AGFG2O95081 481 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 CTRLP40313 264 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 CDCP2Q5VXM1 449 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 JPT2Q9H910 190 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 IGHV1-18A0A0C4DH31 117 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 PMS2P5A8MQ11 134 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 K7ENP7 123 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 LINC01565O15544 149 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 CD28P10747 220 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 CEACAM8P31997 349 aaPredicted RBP3.24□□□□□ -1.89
USH2A-201ENST00000307340 Q86TA4 180 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 CEND1Q8N111 149 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 CNFNQ9BYD5 112 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 CDK2AP2O75956 126 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 PRSS57Q6UWY2 283 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 C18orf32Q8TCD1 76 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 PPDPFQ9H3Y8 114 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 TCTEX1D4Q5JR98 221 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 HCP5Q6MZN7 132 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 KLK2P20151 261 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 RBMY1FQ15415 496 aaKnown RBP3.24□□□□□ -1.89
USH2A-201ENST00000307340 TDRG1Q3Y452 100 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 CST9LQ9H4G1 147 aa3.24□□□□□ -1.89
USH2A-201ENST00000307340 NPYP01303 97 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 UBE2WQ96B02 151 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 C16orf47Q6ZP98 133 aaPredicted RBP3.23□□□□□ -1.89
USH2A-201ENST00000307340 FNDC4Q9H6D8 234 aaPredicted RBP3.23□□□□□ -1.89
USH2A-201ENST00000307340 MSRB2Q9Y3D2 182 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 BRK1Q8WUW1 75 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 CRLF1O75462 422 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 FOXF2Q12947 444 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 C14orf177Q52M58 125 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 C7orf69Q9H7B7 122 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 C9orf47Q6ZRZ4 202 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 DEFB124Q8NES8 71 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 C15orf53Q8NAA6 179 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 AMELYQ99218 206 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 DEPPQ9NTK1 212 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 FAM219BQ5XKK7 198 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 DEFB125Q8N687 156 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 UBE2E2Q96LR5 201 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 PRRC2CQ9Y520 2896 aaKnown RBP3.23□□□□□ -1.89
USH2A-201ENST00000307340 ACACBO00763 2458 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 VWC2LB2RUY7 222 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 CDKN1AP38936 164 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 TPTE2P1Q5T6R2 138 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 MYO9AB2RTY4 2548 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 C11orf86A6NJI1 115 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 TEN1Q86WV5 123 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 A0A1W2PPM0 123 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 RNASE2P10153 161 aaKnown RBP3.23□□□□□ -1.89
USH2A-201ENST00000307340 TMEM158Q8WZ71 300 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 C5orf47Q569G3 176 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 C1QL2Q7Z5L3 287 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 CELA2BP08218 269 aaPredicted RBP3.23□□□□□ -1.89
USH2A-201ENST00000307340 V9GYV3 84 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 TET2Q6N021 2002 aaPredicted RBP3.23□□□□□ -1.89
USH2A-201ENST00000307340 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.23□□□□□ -1.89
USH2A-201ENST00000307340 TDGF1P13385 188 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 PRO1933Q9H354 126 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 MED13LQ71F56 2210 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 TRACP01848 142 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 MST1P26927 711 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 ZNF329Q86UD4 541 aa3.23□□□□□ -1.89
USH2A-201ENST00000307340 EREGO14944 169 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 SPINK4O60575 86 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 IGHV1-46P01743 117 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 LOC101059948A0A1B0GTJ6 334 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 MSMBP08118 114 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 PRR20EP86478 221 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 PRR20CP86479 221 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 PRR20DP86480 221 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 PRR20BP86481 221 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 PRR20AP86496 221 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 C14orf144Q96I85 54 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 C6orf226Q5I0X4 101 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 PLA2G2CQ5R387 149 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 RNASE7Q9H1E1 156 aaKnown RBP3.22□□□□□ -1.89
USH2A-201ENST00000307340 SRRM4A7MD48 611 aaKnown RBP3.22□□□□□ -1.89
USH2A-201ENST00000307340 MIR17HGQ75NE6 70 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 GPHB5Q86YW7 130 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 FAM110AQ9BQ89 295 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 H3BUT2 72 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 ANXA2RQ3ZCQ2 193 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 LINC01620Q4KN68 170 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms