RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 TRAV40A0A0B4J280 105 aa10.55□□□□□ -0.72
DDX54-201ENST00000306014 NPIPB6E9PJ23 425 aa10.55□□□□□ -0.72
DDX54-201ENST00000306014 H3BRN7 92 aa10.55□□□□□ -0.72
DDX54-201ENST00000306014 HOXA3O43365 443 aaPredicted RBP10.55□□□□□ -0.72
DDX54-201ENST00000306014 PIMREGQ9BSJ6 248 aa10.55□□□□□ -0.72
DDX54-201ENST00000306014 NPYP01303 97 aa10.55□□□□□ -0.72
DDX54-201ENST00000306014 EIF4EBP1Q13541 118 aaPredicted RBP10.55□□□□□ -0.72
DDX54-201ENST00000306014 ZNF747Q9BV97 191 aa10.55□□□□□ -0.72
DDX54-201ENST00000306014 C1orf229Q6ZS94 237 aaPredicted RBP10.55□□□□□ -0.72
DDX54-201ENST00000306014 ZNF491Q8N8L2 437 aa10.55□□□□□ -0.72
DDX54-201ENST00000306014 GTSF1Q8WW33 167 aa10.55□□□□□ -0.72
DDX54-201ENST00000306014 PRTN3P24158 256 aa10.54□□□□□ -0.72
DDX54-201ENST00000306014 C14orf178Q8N769 122 aaPredicted RBP10.54□□□□□ -0.72
DDX54-201ENST00000306014 IGFBPL1Q8WX77 278 aa10.54□□□□□ -0.72
DDX54-201ENST00000306014 NCKAP5O14513 1909 aa10.54□□□□□ -0.72
DDX54-201ENST00000306014 IGHV3OR16-12A0A075B7B8 117 aa10.54□□□□□ -0.72
DDX54-201ENST00000306014 A0A1B0GV72 72 aa10.54□□□□□ -0.72
DDX54-201ENST00000306014 GAGE13Q4V321 117 aa10.54□□□□□ -0.72
DDX54-201ENST00000306014 IGF2-ASQ6U949 168 aa10.54□□□□□ -0.72
DDX54-201ENST00000306014 TMEM8BA6NDV4 472 aa10.54□□□□□ -0.72
DDX54-201ENST00000306014 GP9P14770 177 aa10.54□□□□□ -0.72
DDX54-201ENST00000306014 ATG2AQ2TAZ0 1938 aa10.54□□□□□ -0.72
DDX54-201ENST00000306014 SIGMAR1Q99720 223 aa10.54□□□□□ -0.72
DDX54-201ENST00000306014 TP53TG3Q9ULZ0 132 aa10.54□□□□□ -0.72
DDX54-201ENST00000306014 NAV3Q8IVL0 2385 aa10.53□□□□□ -0.72
DDX54-201ENST00000306014 KIAA1549Q9HCM3 1950 aa10.53□□□□□ -0.72
DDX54-201ENST00000306014 K7EM74 188 aa10.53□□□□□ -0.72
DDX54-201ENST00000306014 M0R1W7 72 aa10.53□□□□□ -0.72
DDX54-201ENST00000306014 LINC01559Q495D7 138 aa10.53□□□□□ -0.72
DDX54-201ENST00000306014 SEM1Q6ZVN7 128 aa10.53□□□□□ -0.72
DDX54-201ENST00000306014 TRAV41A0A0B4J266 112 aa10.53□□□□□ -0.72
DDX54-201ENST00000306014 CR1LQ2VPA4 569 aa10.53□□□□□ -0.72
DDX54-201ENST00000306014 MINOS1Q5TGZ0 78 aa10.53□□□□□ -0.72
DDX54-201ENST00000306014 VGLL1Q99990 258 aa10.53□□□□□ -0.72
DDX54-201ENST00000306014 C7orf69Q9H7B7 122 aa10.53□□□□□ -0.72
DDX54-201ENST00000306014 MINOS1-NBL1R4GNA1 71 aa10.53□□□□□ -0.72
DDX54-201ENST00000306014 TANC2Q9HCD6 1990 aa10.53□□□□□ -0.72
DDX54-201ENST00000306014 SPTBN4Q9H254 2564 aa10.53□□□□□ -0.72
DDX54-201ENST00000306014 H3BRM9 83 aa10.52□□□□□ -0.72
DDX54-201ENST00000306014 PAX1P15863 534 aa10.52□□□□□ -0.72
DDX54-201ENST00000306014 LGALS9BQ3B8N2 356 aa10.52□□□□□ -0.72
DDX54-201ENST00000306014 LGALS9CQ6DKI2 356 aa10.52□□□□□ -0.72
DDX54-201ENST00000306014 IL17RELQ6ZVW7 336 aa10.52□□□□□ -0.72
DDX54-201ENST00000306014 GTSF1LQ9H1H1 148 aa10.52□□□□□ -0.72
DDX54-201ENST00000306014 C9orf118A6NHY6 69 aa10.52□□□□□ -0.73
DDX54-201ENST00000306014 OOSP1A8MZH6 123 aa10.52□□□□□ -0.73
DDX54-201ENST00000306014 LCNL1Q6ZST4 164 aa10.52□□□□□ -0.73
DDX54-201ENST00000306014 RNASE8Q8TDE3 154 aaKnown RBP10.52□□□□□ -0.73
DDX54-201ENST00000306014 IGLV2-8P01709 118 aa10.52□□□□□ -0.73
DDX54-201ENST00000306014 PAPPA-AS1Q5QFB9 102 aa10.52□□□□□ -0.73
DDX54-201ENST00000306014 GEMIN7Q9H840 131 aaKnown RBP10.52□□□□□ -0.73
DDX54-201ENST00000306014 CEP192Q8TEP8 1941 aa10.52□□□□□ -0.73
DDX54-201ENST00000306014 CPAMD8Q8IZJ3 1885 aa10.52□□□□□ -0.73
DDX54-201ENST00000306014 IGKV1-17P01599 117 aa10.51□□□□□ -0.73
DDX54-201ENST00000306014 HLA-DMBP28068 263 aa10.51□□□□□ -0.73
DDX54-201ENST00000306014 KAAG1Q9UBP8 84 aa10.51□□□□□ -0.73
DDX54-201ENST00000306014 DKK2Q9UBU2 259 aa10.51□□□□□ -0.73
DDX54-201ENST00000306014 PLNP26678 52 aa10.51□□□□□ -0.73
DDX54-201ENST00000306014 EMP1P54849 157 aa10.51□□□□□ -0.73
DDX54-201ENST00000306014 DEFB125Q8N687 156 aa10.51□□□□□ -0.73
DDX54-201ENST00000306014 NPFFR1Q9GZQ6 430 aa10.51□□□□□ -0.73
DDX54-201ENST00000306014 IGFL2Q6UWQ7 119 aa10.51□□□□□ -0.73
DDX54-201ENST00000306014 TRAV26-2A0A0B4J265 109 aa10.5□□□□□ -0.73
DDX54-201ENST00000306014 G3V318 75 aa10.5□□□□□ -0.73
DDX54-201ENST00000306014 H7C1H1 209 aa10.5□□□□□ -0.73
DDX54-201ENST00000306014 K7EP13 123 aa10.5□□□□□ -0.73
DDX54-201ENST00000306014 OVOL1O14753 267 aa10.5□□□□□ -0.73
DDX54-201ENST00000306014 BRD3OSQ6XYD6 125 aa10.5□□□□□ -0.73
DDX54-201ENST00000306014 TLN1Q9Y490 2541 aaKnown RBP10.5□□□□□ -0.73
DDX54-201ENST00000306014 IGHV3-64A0A075B6Q5 118 aa10.5□□□□□ -0.73
DDX54-201ENST00000306014 IGHV2-70DA0A0C4DH43 119 aa10.5□□□□□ -0.73
DDX54-201ENST00000306014 CGB3P0DN86 165 aa10.5□□□□□ -0.73
DDX54-201ENST00000306014 CGB7P0DN87 165 aa10.5□□□□□ -0.73
DDX54-201ENST00000306014 ATP6V0E1O15342 81 aa10.5□□□□□ -0.73
DDX54-201ENST00000306014 EGR2P11161 476 aaPredicted RBP10.49□□□□□ -0.73
DDX54-201ENST00000306014 SAA4P35542 130 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 PAX2Q02962 417 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 MTURNQ8N3F0 131 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 PSMB11A5LHX3 300 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 ADAMTSL5Q6ZMM2 481 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 C9orf139Q6ZV77 190 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 PCP2Q8IVA1 136 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 DPH3P1Q9H4G8 78 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 TNFRSF18Q9Y5U5 241 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 CHD7Q9P2D1 2997 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 NDUFS7O75251 213 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 GDF5OSQ5U4N7 250 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 DUX5Q96PT3 197 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 GNLYP22749 145 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 CCL19Q99731 98 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 VCX2Q9H322 139 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 KLF12Q9Y4X4 402 aa10.49□□□□□ -0.73
DDX54-201ENST00000306014 TRAV2A0A0B4J234 112 aa10.48□□□□□ -0.73
DDX54-201ENST00000306014 ANKRD39Q53RE8 183 aa10.48□□□□□ -0.73
DDX54-201ENST00000306014 C8orf31Q8N9H6 132 aa10.48□□□□□ -0.73
DDX54-201ENST00000306014 IGLV2-23P01705 113 aa10.48□□□□□ -0.73
DDX54-201ENST00000306014 Q5PR19 223 aa10.48□□□□□ -0.73
DDX54-201ENST00000306014 CSTL1Q9H114 145 aa10.48□□□□□ -0.73
DDX54-201ENST00000306014 MRPL35Q9NZE8 188 aaKnown RBP10.48□□□□□ -0.73
DDX54-201ENST00000306014 MOB4Q9Y3A3 225 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms