RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 VGLL1Q99990 258 aa12.96□□□□□ -0.33
BRD3-201ENST00000303407 SPTA1P02549 2419 aa12.96□□□□□ -0.33
BRD3-201ENST00000303407 TCF15Q12870 199 aa12.96□□□□□ -0.33
BRD3-201ENST00000303407 ZNF124Q15973 351 aa12.96□□□□□ -0.33
BRD3-201ENST00000303407 ZNF491Q8N8L2 437 aa12.96□□□□□ -0.33
BRD3-201ENST00000303407 RTTNQ86VV8 2226 aa12.96□□□□□ -0.34
BRD3-201ENST00000303407 ZNF407Q9C0G0 2248 aa12.96□□□□□ -0.34
BRD3-201ENST00000303407 KLK9Q9UKQ9 250 aa12.96□□□□□ -0.34
BRD3-201ENST00000303407 LINC01619G3V211 115 aa12.95□□□□□ -0.34
BRD3-201ENST00000303407 IGFBPL1Q8WX77 278 aa12.95□□□□□ -0.34
BRD3-201ENST00000303407 MORN3Q6PF18 240 aaPredicted RBP12.95□□□□□ -0.34
BRD3-201ENST00000303407 TRPT1Q86TN4 253 aaKnown RBP12.95□□□□□ -0.34
BRD3-201ENST00000303407 PHLDA1Q8WV24 401 aaPredicted RBP12.95□□□□□ -0.34
BRD3-201ENST00000303407 C11orf68Q9H3H3 251 aaKnown RBP12.95□□□□□ -0.34
BRD3-201ENST00000303407 SPINK13Q1W4C9 94 aa12.95□□□□□ -0.34
BRD3-201ENST00000303407 RITA1Q96K30 269 aa12.95□□□□□ -0.34
BRD3-201ENST00000303407 IGLV2-14P01704 120 aa12.94□□□□□ -0.34
BRD3-201ENST00000303407 A8MWV9 139 aa12.94□□□□□ -0.34
BRD3-201ENST00000303407 LINC00158P58513 81 aa12.94□□□□□ -0.34
BRD3-201ENST00000303407 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.94□□□□□ -0.34
BRD3-201ENST00000303407 Q96MF0 132 aa12.94□□□□□ -0.34
BRD3-201ENST00000303407 ESDP10768 282 aa12.93□□□□□ -0.34
BRD3-201ENST00000303407 ANXA2RQ3ZCQ2 193 aa12.93□□□□□ -0.34
BRD3-201ENST00000303407 PRSS57Q6UWY2 283 aa12.93□□□□□ -0.34
BRD3-201ENST00000303407 TP53TG1Q9Y2A0 90 aa12.93□□□□□ -0.34
BRD3-201ENST00000303407 CRPP02741 224 aa12.93□□□□□ -0.34
BRD3-201ENST00000303407 NDUFS7O75251 213 aa12.93□□□□□ -0.34
BRD3-201ENST00000303407 DENND4AQ7Z401 1863 aa12.92□□□□□ -0.34
BRD3-201ENST00000303407 SEM1Q6ZVN7 128 aa12.92□□□□□ -0.34
BRD3-201ENST00000303407 SIGLEC8Q9NYZ4 499 aa12.92□□□□□ -0.34
BRD3-201ENST00000303407 RASL10AQ92737 203 aa12.92□□□□□ -0.34
BRD3-201ENST00000303407 CD5LO43866 347 aa12.92□□□□□ -0.34
BRD3-201ENST00000303407 UBE2V1Q13404 147 aa12.92□□□□□ -0.34
BRD3-201ENST00000303407 TMEM95Q3KNT9 176 aa12.92□□□□□ -0.34
BRD3-201ENST00000303407 OR11H6Q8NGC7 330 aa12.92□□□□□ -0.34
BRD3-201ENST00000303407 DTX2Q86UW9 622 aa12.92□□□□□ -0.34
BRD3-201ENST00000303407 TRAV8-4A0A0B4J246 113 aa12.91□□□□□ -0.34
BRD3-201ENST00000303407 C1orf122Q6ZSJ8 110 aa12.91□□□□□ -0.34
BRD3-201ENST00000303407 SNHG12Q9BXW3 62 aa12.91□□□□□ -0.34
BRD3-201ENST00000303407 TIMM21Q9BVV7 248 aa12.91□□□□□ -0.34
BRD3-201ENST00000303407 KNCNA6PVL3 124 aa12.91□□□□□ -0.34
BRD3-201ENST00000303407 HLA-DMBP28068 263 aa12.91□□□□□ -0.34
BRD3-201ENST00000303407 SPXQ9BT56 116 aa12.91□□□□□ -0.34
BRD3-201ENST00000303407 TRAV12-2A0A075B6T6 113 aa12.91□□□□□ -0.34
BRD3-201ENST00000303407 C1QTNF4Q9BXJ3 329 aa12.91□□□□□ -0.34
BRD3-201ENST00000303407 MYO7BQ6PIF6 2116 aa12.9□□□□□ -0.34
BRD3-201ENST00000303407 C2orf66Q6UXQ4 117 aa12.9□□□□□ -0.34
BRD3-201ENST00000303407 C1orf159Q96HA4 380 aa12.9□□□□□ -0.34
BRD3-201ENST00000303407 COX11Q9Y6N1 276 aa12.9□□□□□ -0.34
BRD3-201ENST00000303407 NPYP01303 97 aa12.9□□□□□ -0.34
BRD3-201ENST00000303407 J3QLI3 93 aa12.9□□□□□ -0.34
BRD3-201ENST00000303407 IGHV7-4-1A0A0J9YVY3 117 aa12.9□□□□□ -0.35
BRD3-201ENST00000303407 IGLC2P0DOY2 106 aa12.9□□□□□ -0.35
BRD3-201ENST00000303407 IGLC3P0DOY3 106 aa12.9□□□□□ -0.35
BRD3-201ENST00000303407 IGHV1OR15-1A0A075B7D0 117 aa12.89□□□□□ -0.35
BRD3-201ENST00000303407 NPBQ8NG41 125 aa12.89□□□□□ -0.35
BRD3-201ENST00000303407 TMEM141Q96I45 108 aa12.89□□□□□ -0.35
BRD3-201ENST00000303407 XCL2Q9UBD3 114 aa12.89□□□□□ -0.35
BRD3-201ENST00000303407 NCOR1O75376 2440 aa12.89□□□□□ -0.35
BRD3-201ENST00000303407 CKS1BP61024 79 aa12.88□□□□□ -0.35
BRD3-201ENST00000303407 LY6G5BQ8NDX9 201 aa12.88□□□□□ -0.35
BRD3-201ENST00000303407 PGPEP1Q9NXJ5 209 aa12.88□□□□□ -0.35
BRD3-201ENST00000303407 TRAV13-1A0A0B4J241 112 aa12.88□□□□□ -0.35
BRD3-201ENST00000303407 I3L2K1 104 aa12.88□□□□□ -0.35
BRD3-201ENST00000303407 ATXN8Q156A1 80 aa12.88□□□□□ -0.35
BRD3-201ENST00000303407 DYNAPQ8N1N2 210 aa12.88□□□□□ -0.35
BRD3-201ENST00000303407 TMEM86BQ8N661 226 aa12.88□□□□□ -0.35
BRD3-201ENST00000303407 WIPF2Q8TF74 440 aaPredicted RBP12.88□□□□□ -0.35
BRD3-201ENST00000303407 MUC22E2RYF6 1773 aaPredicted RBP12.88□□□□□ -0.35
BRD3-201ENST00000303407 ADAMTS9Q9P2N4 1935 aa12.88□□□□□ -0.35
BRD3-201ENST00000303407 EP300Q09472 2414 aaPredicted RBP12.88□□□□□ -0.35
BRD3-201ENST00000303407 WISP2O76076 250 aa12.88□□□□□ -0.35
BRD3-201ENST00000303407 MORN5Q5VZ52 161 aa12.88□□□□□ -0.35
BRD3-201ENST00000303407 I3L3M4 83 aa12.88□□□□□ -0.35
BRD3-201ENST00000303407 TCTEX1D4Q5JR98 221 aa12.88□□□□□ -0.35
BRD3-201ENST00000303407 SIGMAR1Q99720 223 aa12.88□□□□□ -0.35
BRD3-201ENST00000303407 KMT2EQ8IZD2 1858 aa12.87□□□□□ -0.35
BRD3-201ENST00000303407 IGLL1P15814 213 aa12.87□□□□□ -0.35
BRD3-201ENST00000303407 SLC25A20O43772 301 aa12.87□□□□□ -0.35
BRD3-201ENST00000303407 GP9P14770 177 aa12.87□□□□□ -0.35
BRD3-201ENST00000303407 CDKN1BP46527 198 aa12.87□□□□□ -0.35
BRD3-201ENST00000303407 A0A087WX48 190 aa12.86□□□□□ -0.35
BRD3-201ENST00000303407 IGHV3-16A0A0C4DH30 117 aa12.86□□□□□ -0.35
BRD3-201ENST00000303407 CR1LQ2VPA4 569 aa12.86□□□□□ -0.35
BRD3-201ENST00000303407 ODF3L1Q8IXM7 274 aa12.86□□□□□ -0.35
BRD3-201ENST00000303407 H3BUA1 57 aa12.86□□□□□ -0.35
BRD3-201ENST00000303407 LGALS9BQ3B8N2 356 aa12.86□□□□□ -0.35
BRD3-201ENST00000303407 LGALS9CQ6DKI2 356 aa12.86□□□□□ -0.35
BRD3-201ENST00000303407 NEGR1Q7Z3B1 354 aa12.86□□□□□ -0.35
BRD3-201ENST00000303407 DLX4Q92988 240 aaPredicted RBP12.86□□□□□ -0.35
BRD3-201ENST00000303407 MYMXA0A1B0GTQ4 84 aa12.86□□□□□ -0.35
BRD3-201ENST00000303407 IGLV2-23P01705 113 aa12.86□□□□□ -0.35
BRD3-201ENST00000303407 KLF5Q13887 457 aaPredicted RBP12.86□□□□□ -0.35
BRD3-201ENST00000303407 CFHR4Q92496 578 aa12.85□□□□□ -0.35
BRD3-201ENST00000303407 EGR2P11161 476 aaPredicted RBP12.85□□□□□ -0.35
BRD3-201ENST00000303407 PMVKQ15126 192 aa12.85□□□□□ -0.35
BRD3-201ENST00000303407 PATE2Q6UY27 113 aa12.85□□□□□ -0.35
BRD3-201ENST00000303407 IGF2BP2-AS1Q96M15 143 aa12.85□□□□□ -0.35
BRD3-201ENST00000303407 APC2O95996 2303 aa12.85□□□□□ -0.35
BRD3-201ENST00000303407 C11orf1Q9H5F2 150 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms