RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SMIM27A0A1W2PRY6 76 aa11.11□□□□□ -0.63
SHCBP1-201ENST00000303383 C5orf52A6NGY3 159 aa11.11□□□□□ -0.63
SHCBP1-201ENST00000303383 CBLN1P23435 193 aa11.11□□□□□ -0.63
SHCBP1-201ENST00000303383 KLHDC1Q8N7A1 406 aa11.11□□□□□ -0.63
SHCBP1-201ENST00000303383 GLMPQ8WWB7 406 aa11.11□□□□□ -0.63
SHCBP1-201ENST00000303383 IGHV7-4-1A0A0J9YVY3 117 aa11.1□□□□□ -0.63
SHCBP1-201ENST00000303383 IZUMO1RA6ND01 250 aa11.1□□□□□ -0.63
SHCBP1-201ENST00000303383 UBE2CO00762 179 aa11.1□□□□□ -0.63
SHCBP1-201ENST00000303383 ACTL10Q5JWF8 245 aa11.1□□□□□ -0.63
SHCBP1-201ENST00000303383 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
SHCBP1-201ENST00000303383 LGALS1P09382 135 aaKnown RBP11.1□□□□□ -0.63
SHCBP1-201ENST00000303383 COX19Q49B96 90 aa11.1□□□□□ -0.63
SHCBP1-201ENST00000303383 CLEC5AQ9NY25 188 aa11.1□□□□□ -0.63
SHCBP1-201ENST00000303383 HIGD1CA8MV81 97 aa11.1□□□□□ -0.63
SHCBP1-201ENST00000303383 LINC00322Q6ZN03 302 aaPredicted RBP11.1□□□□□ -0.63
SHCBP1-201ENST00000303383 GPHB5Q86YW7 130 aa11.1□□□□□ -0.63
SHCBP1-201ENST00000303383 ZNF738Q8NE65 137 aa11.1□□□□□ -0.63
SHCBP1-201ENST00000303383 Q8TAT8 98 aa11.1□□□□□ -0.63
SHCBP1-201ENST00000303383 UBE2E2Q96LR5 201 aa11.1□□□□□ -0.63
SHCBP1-201ENST00000303383 NPSP0C0P6 89 aa11.09□□□□□ -0.63
SHCBP1-201ENST00000303383 OR4B1Q8NGF8 309 aa11.09□□□□□ -0.63
SHCBP1-201ENST00000303383 C8orf49Q96NF6 230 aa11.09□□□□□ -0.63
SHCBP1-201ENST00000303383 VGLL1Q99990 258 aa11.09□□□□□ -0.63
SHCBP1-201ENST00000303383 S100A2P29034 98 aa11.09□□□□□ -0.63
SHCBP1-201ENST00000303383 TMEM78Q5T7P6 136 aa11.09□□□□□ -0.63
SHCBP1-201ENST00000303383 HIVEP2P31629 2446 aa11.09□□□□□ -0.63
SHCBP1-201ENST00000303383 MTORP42345 2549 aa11.08□□□□□ -0.63
SHCBP1-201ENST00000303383 ZNF418Q8TF45 676 aaPredicted RBP11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 MRPL18Q9H0U6 180 aaKnown RBP11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 SELENOKQ9Y6D0 94 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 PDZD2O15018 2839 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 XKRY2A2RUG3 117 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 TMEM238C9JI98 176 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 SRD5A1P18405 259 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 DDTP30046 118 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 TCF24Q7RTU0 167 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 NUP35Q8NFH5 326 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 DPF1Q92782 380 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 SMPXQ9UHP9 88 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 C19orf71A6NCJ1 209 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 K7EMT4 169 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 KRTAP1-1Q07627 177 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 ERCC8Q13216 396 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 CT83Q5H943 113 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 PRR25Q96S07 402 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 NRN1Q9NPD7 142 aa11.08□□□□□ -0.64
SHCBP1-201ENST00000303383 MT-ND6P03923 174 aa11.07□□□□□ -0.64
SHCBP1-201ENST00000303383 SYNJ2BPP57105 145 aa11.07□□□□□ -0.64
SHCBP1-201ENST00000303383 PDZD11Q5EBL8 140 aa11.07□□□□□ -0.64
SHCBP1-201ENST00000303383 LINC00614P0C842 121 aa11.07□□□□□ -0.64
SHCBP1-201ENST00000303383 Q8N2B8 174 aa11.07□□□□□ -0.64
SHCBP1-201ENST00000303383 PGLYRP4Q96LB8 373 aa11.07□□□□□ -0.64
SHCBP1-201ENST00000303383 TPPP3Q9BW30 176 aa11.07□□□□□ -0.64
SHCBP1-201ENST00000303383 PRAC2D3DTV9 90 aa11.07□□□□□ -0.64
SHCBP1-201ENST00000303383 M0QZ24 198 aa11.07□□□□□ -0.64
SHCBP1-201ENST00000303383 CAMPP49913 170 aa11.07□□□□□ -0.64
SHCBP1-201ENST00000303383 FAM162BQ5T6X4 162 aa11.07□□□□□ -0.64
SHCBP1-201ENST00000303383 GNB1LQ9BYB4 327 aa11.07□□□□□ -0.64
SHCBP1-201ENST00000303383 IGHV4OR15-8A0A075B7B6 117 aa11.06□□□□□ -0.64
SHCBP1-201ENST00000303383 A0A087WW49 117 aa11.06□□□□□ -0.64
SHCBP1-201ENST00000303383 DLEU1O43261 78 aa11.06□□□□□ -0.64
SHCBP1-201ENST00000303383 Q6ZSV7 163 aa11.06□□□□□ -0.64
SHCBP1-201ENST00000303383 MRPL53Q96EL3 112 aaKnown RBP11.06□□□□□ -0.64
SHCBP1-201ENST00000303383 DMRTA1Q5VZB9 504 aa11.06□□□□□ -0.64
SHCBP1-201ENST00000303383 WFDC3Q8IUB2 231 aa11.06□□□□□ -0.64
SHCBP1-201ENST00000303383 RBAKDNA6NC62 111 aa11.05□□□□□ -0.64
SHCBP1-201ENST00000303383 HLA-DQA1P01909 254 aa11.05□□□□□ -0.64
SHCBP1-201ENST00000303383 Q71RC1 249 aaPredicted RBP11.05□□□□□ -0.64
SHCBP1-201ENST00000303383 BORCS7Q96B45 105 aa11.05□□□□□ -0.64
SHCBP1-201ENST00000303383 TMSB15BA0A087X1C1 80 aa11.05□□□□□ -0.64
SHCBP1-201ENST00000303383 TRAV8-2A0A0B4J237 113 aa11.05□□□□□ -0.64
SHCBP1-201ENST00000303383 TMEM189A5PLL7 270 aa11.05□□□□□ -0.64
SHCBP1-201ENST00000303383 GZMBP10144 247 aa11.05□□□□□ -0.64
SHCBP1-201ENST00000303383 HOXA5P20719 270 aa11.05□□□□□ -0.64
SHCBP1-201ENST00000303383 HOXD3P31249 432 aaPredicted RBP11.05□□□□□ -0.64
SHCBP1-201ENST00000303383 RBPMS2Q6ZRY4 209 aaKnown RBP11.05□□□□□ -0.64
SHCBP1-201ENST00000303383 OR10J6PQ8NGY7 276 aa11.05□□□□□ -0.64
SHCBP1-201ENST00000303383 ID1P41134 155 aa11.05□□□□□ -0.64
SHCBP1-201ENST00000303383 CDPF1Q6NVV7 123 aa11.05□□□□□ -0.64
SHCBP1-201ENST00000303383 GFRA4Q9GZZ7 299 aa11.04□□□□□ -0.64
SHCBP1-201ENST00000303383 SH2D1AO60880 128 aa11.04□□□□□ -0.64
SHCBP1-201ENST00000303383 FRMD6-AS1P0C7T7 363 aa11.04□□□□□ -0.64
SHCBP1-201ENST00000303383 CDX1P47902 265 aaPredicted RBP11.04□□□□□ -0.64
SHCBP1-201ENST00000303383 SMR3AQ99954 134 aa11.04□□□□□ -0.64
SHCBP1-201ENST00000303383 TMEM208Q9BTX3 173 aa11.04□□□□□ -0.64
SHCBP1-201ENST00000303383 PHOX2AO14813 284 aa11.04□□□□□ -0.64
SHCBP1-201ENST00000303383 TFPI2P48307 235 aa11.04□□□□□ -0.64
SHCBP1-201ENST00000303383 ZNF138P52744 262 aa11.04□□□□□ -0.64
SHCBP1-201ENST00000303383 DEFB136Q30KP8 78 aa11.04□□□□□ -0.64
SHCBP1-201ENST00000303383 ESM1Q9NQ30 184 aa11.04□□□□□ -0.64
SHCBP1-201ENST00000303383 ORM1P02763 201 aa11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 RNF152Q8N8N0 203 aa11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 KLHL30-AS1Q8NEE0 82 aa11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 MYOZ3Q8TDC0 251 aa11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 RNASE8Q8TDE3 154 aaKnown RBP11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 FAM231BA6NCW3 169 aa11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 NPIPB6E9PJ23 425 aa11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 APCSP02743 223 aa11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 CRISP2P16562 243 aa11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 RASL11AQ6T310 242 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms