RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 A0A1B0GX51 115 aa8.36□□□□□ -1.07
CLIP1-201ENST00000302528 NDUFB8O95169 186 aa8.36□□□□□ -1.07
CLIP1-201ENST00000302528 COL8A2P25067 703 aa8.36□□□□□ -1.07
CLIP1-201ENST00000302528 CDKN1BP46527 198 aa8.36□□□□□ -1.07
CLIP1-201ENST00000302528 ZNF492Q9P255 531 aa8.36□□□□□ -1.07
CLIP1-201ENST00000302528 ARFGEF3Q5TH69 2177 aa8.36□□□□□ -1.07
CLIP1-201ENST00000302528 C15orf62A8K5M9 175 aa8.36□□□□□ -1.07
CLIP1-201ENST00000302528 XCL1P47992 114 aa8.36□□□□□ -1.07
CLIP1-201ENST00000302528 BOD1L2Q8IYS8 172 aa8.36□□□□□ -1.07
CLIP1-201ENST00000302528 K7EP34 96 aa8.36□□□□□ -1.07
CLIP1-201ENST00000302528 MSMBP08118 114 aa8.36□□□□□ -1.07
CLIP1-201ENST00000302528 LY6HO94772 140 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 LYPD2Q6UXB3 125 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 ZNF503Q96F45 646 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 HLA-DMBP28068 263 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 LHFPL1Q86WI0 220 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 TMEM105Q8N8V8 129 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 GREB1Q4ZG55 1949 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 K7EP13 123 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 GATA3P23771 443 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 Q0VG73 95 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 BVES-AS1Q5T3Y7 98 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 NTN5Q8WTR8 489 aaPredicted RBP8.35□□□□□ -1.07
CLIP1-201ENST00000302528 IGKV1-27A0A075B6S5 117 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 A0A0G2JNJ9 132 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 C4orf48Q5BLP8 95 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 KLHDC3Q9BQ90 382 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 Q9UFV3 132 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 ZSWIM8A7E2V4 1837 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 ANKRD36A6QL64 1941 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 J3QQQ9 107 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 BUB3O43684 328 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 TIRAPP58753 221 aa8.35□□□□□ -1.07
CLIP1-201ENST00000302528 RNASE13Q5GAN3 156 aaKnown RBP8.35□□□□□ -1.07
CLIP1-201ENST00000302528 BAALC-AS2P0C853 105 aa8.34□□□□□ -1.07
CLIP1-201ENST00000302528 IGLC2P0DOY2 106 aa8.34□□□□□ -1.07
CLIP1-201ENST00000302528 IGLC3P0DOY3 106 aa8.34□□□□□ -1.07
CLIP1-201ENST00000302528 CEND1Q8N111 149 aa8.34□□□□□ -1.07
CLIP1-201ENST00000302528 C18orf32Q8TCD1 76 aa8.34□□□□□ -1.07
CLIP1-201ENST00000302528 POLR3KQ9Y2Y1 108 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-201ENST00000302528 CEP250Q9BV73 2442 aa8.34□□□□□ -1.07
CLIP1-201ENST00000302528 A0A0J9YY99 117 aa8.34□□□□□ -1.07
CLIP1-201ENST00000302528 FNDC10F2Z333 226 aa8.34□□□□□ -1.07
CLIP1-201ENST00000302528 CFPP27918 469 aa8.34□□□□□ -1.07
CLIP1-201ENST00000302528 MRPL51Q4U2R6 128 aaKnown RBP8.34□□□□□ -1.07
CLIP1-201ENST00000302528 TDRD6O60522 2096 aaKnown RBP8.34□□□□□ -1.07
CLIP1-201ENST00000302528 MGAMO43451 1857 aa8.34□□□□□ -1.07
CLIP1-201ENST00000302528 LINC00205P59089 165 aa8.34□□□□□ -1.08
CLIP1-201ENST00000302528 C8orf86Q6ZUL3 223 aa8.34□□□□□ -1.08
CLIP1-201ENST00000302528 MAPK1IP1LQ8NDC0 245 aa8.34□□□□□ -1.08
CLIP1-201ENST00000302528 MRPL35Q9NZE8 188 aaKnown RBP8.34□□□□□ -1.08
CLIP1-201ENST00000302528 H3BMG7 143 aa8.33□□□□□ -1.08
CLIP1-201ENST00000302528 WDR90Q96KV7 1748 aa8.33□□□□□ -1.08
CLIP1-201ENST00000302528 SP5Q6BEB4 398 aaPredicted RBP8.33□□□□□ -1.08
CLIP1-201ENST00000302528 TNS1Q9HBL0 1735 aaKnown RBP8.33□□□□□ -1.08
CLIP1-201ENST00000302528 CHD5Q8TDI0 1954 aa8.33□□□□□ -1.08
CLIP1-201ENST00000302528 A0A1W2PPM0 123 aa8.33□□□□□ -1.08
CLIP1-201ENST00000302528 IGKV1-16P04430 117 aa8.33□□□□□ -1.08
CLIP1-201ENST00000302528 YPEL3P61236 119 aaPredicted RBP8.33□□□□□ -1.08
CLIP1-201ENST00000302528 SCN2AQ99250 2005 aa8.33□□□□□ -1.08
CLIP1-201ENST00000302528 IGKV1D-17A0A075B6S4 117 aa8.33□□□□□ -1.08
CLIP1-201ENST00000302528 EFNA2O43921 213 aa8.33□□□□□ -1.08
CLIP1-201ENST00000302528 UBE2E1P51965 193 aa8.33□□□□□ -1.08
CLIP1-201ENST00000302528 RHOHQ15669 191 aa8.33□□□□□ -1.08
CLIP1-201ENST00000302528 Q6ZQT7 251 aa8.33□□□□□ -1.08
CLIP1-201ENST00000302528 GGNQ86UU5 652 aa8.33□□□□□ -1.08
CLIP1-201ENST00000302528 DOCK4Q8N1I0 1966 aa8.33□□□□□ -1.08
CLIP1-201ENST00000302528 GFI1Q99684 422 aa8.32□□□□□ -1.08
CLIP1-201ENST00000302528 C20orf144Q9BQM9 153 aa8.32□□□□□ -1.08
CLIP1-201ENST00000302528 ARTNQ5T4W7 220 aa8.32□□□□□ -1.08
CLIP1-201ENST00000302528 Q96MF0 132 aa8.32□□□□□ -1.08
CLIP1-201ENST00000302528 DOCK10Q96BY6 2186 aa8.32□□□□□ -1.08
CLIP1-201ENST00000302528 F8VRH5 84 aa8.32□□□□□ -1.08
CLIP1-201ENST00000302528 K7ERJ3 54 aa8.32□□□□□ -1.08
CLIP1-201ENST00000302528 IGLV3-19P01714 112 aa8.32□□□□□ -1.08
CLIP1-201ENST00000302528 COX8AP10176 69 aa8.32□□□□□ -1.08
CLIP1-201ENST00000302528 ZFP36L1Q07352 338 aaKnown RBP8.32□□□□□ -1.08
CLIP1-201ENST00000302528 Q71RC1 249 aaPredicted RBP8.32□□□□□ -1.08
CLIP1-201ENST00000302528 HEATR1Q9H583 2144 aaKnown RBP8.32□□□□□ -1.08
CLIP1-201ENST00000302528 G3V318 75 aa8.32□□□□□ -1.08
CLIP1-201ENST00000302528 LGALS9BQ3B8N2 356 aa8.32□□□□□ -1.08
CLIP1-201ENST00000302528 LGALS9CQ6DKI2 356 aa8.32□□□□□ -1.08
CLIP1-201ENST00000302528 C5orf24Q7Z6I8 188 aa8.32□□□□□ -1.08
CLIP1-201ENST00000302528 MYOFQ9NZM1 2061 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 TRBV19A0A075B6N1 114 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 IGHV1-69DA0A0B4J2H0 117 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 PROP1O75360 226 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 IGHV1-69P01742 117 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 TRAV4A0A0B4J268 109 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 UNQ6494/PRO21346Q6UXR6 183 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 VSIG2Q96IQ7 327 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 B5MCH6 92 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 IGLV2-23P01705 113 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 Q6P435 159 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 IGFBPL1Q8WX77 278 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 CAMK2N2Q96S95 79 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 TRBV6-6A0A0A6YYG2 114 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 NDUFA4O00483 81 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 NREPQ16612 68 aa8.31□□□□□ -1.08
CLIP1-201ENST00000302528 SLC25A29Q8N8R3 303 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms