RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 WDR73Q6P4I2 378 aa9.15□□□□□ -0.94
TPM3-202ENST00000302206 C10orf99Q6UWK7 81 aa9.15□□□□□ -0.94
TPM3-202ENST00000302206 WFDC12Q8WWY7 111 aa9.15□□□□□ -0.94
TPM3-202ENST00000302206 ZC2HC1AQ96GY0 325 aa9.15□□□□□ -0.94
TPM3-202ENST00000302206 GNB1LQ9BYB4 327 aa9.15□□□□□ -0.94
TPM3-202ENST00000302206 PPP1R14DQ9NXH3 145 aa9.15□□□□□ -0.94
TPM3-202ENST00000302206 NAT8BQ9UHF3 227 aa9.15□□□□□ -0.94
TPM3-202ENST00000302206 TRAPPC1Q9Y5R8 145 aa9.15□□□□□ -0.94
TPM3-202ENST00000302206 ANK2Q01484 3957 aa9.15□□□□□ -0.95
TPM3-202ENST00000302206 IGHV3-49A0A0A0MS15 119 aa9.14□□□□□ -0.95
TPM3-202ENST00000302206 A8MWP6 167 aa9.14□□□□□ -0.95
TPM3-202ENST00000302206 CT45A10P0DMU9 189 aa9.14□□□□□ -0.95
TPM3-202ENST00000302206 HOXA5P20719 270 aa9.14□□□□□ -0.95
TPM3-202ENST00000302206 LINC00322Q6ZN03 302 aaPredicted RBP9.14□□□□□ -0.95
TPM3-202ENST00000302206 ATP5L2Q7Z4Y8 100 aa9.14□□□□□ -0.95
TPM3-202ENST00000302206 WIPF2Q8TF74 440 aaPredicted RBP9.14□□□□□ -0.95
TPM3-202ENST00000302206 PRR25Q96S07 402 aa9.14□□□□□ -0.95
TPM3-202ENST00000302206 IGHV3OR16-13A0A075B7E8 117 aa9.13□□□□□ -0.95
TPM3-202ENST00000302206 IGKV2-40A0A087WW87 121 aaPredicted RBP9.13□□□□□ -0.95
TPM3-202ENST00000302206 IGHV3-74A0A0B4J1X5 117 aa9.13□□□□□ -0.95
TPM3-202ENST00000302206 SOCS3O14543 225 aa9.13□□□□□ -0.95
TPM3-202ENST00000302206 IGKV2D-40P01614 121 aaPredicted RBP9.13□□□□□ -0.95
TPM3-202ENST00000302206 HLA-DMBP28068 263 aa9.13□□□□□ -0.95
TPM3-202ENST00000302206 CDX1P47902 265 aaPredicted RBP9.13□□□□□ -0.95
TPM3-202ENST00000302206 SRSF2Q01130 221 aaKnown RBP9.13□□□□□ -0.95
TPM3-202ENST00000302206 FABP9Q0Z7S8 132 aa9.13□□□□□ -0.95
TPM3-202ENST00000302206 COA6Q5JTJ3 125 aaKnown RBP9.13□□□□□ -0.95
TPM3-202ENST00000302206 LCE2DQ5TA82 110 aaPredicted RBP9.13□□□□□ -0.95
TPM3-202ENST00000302206 Q6ZSV7 163 aa9.13□□□□□ -0.95
TPM3-202ENST00000302206 NDFIP1Q9BT67 221 aa9.13□□□□□ -0.95
TPM3-202ENST00000302206 RHPN1-AS1Q9BWJ2 59 aa9.13□□□□□ -0.95
TPM3-202ENST00000302206 FAM181BA6NEQ2 426 aa9.12□□□□□ -0.95
TPM3-202ENST00000302206 EREGO14944 169 aa9.12□□□□□ -0.95
TPM3-202ENST00000302206 RNASE1P07998 156 aaKnown RBP9.12□□□□□ -0.95
TPM3-202ENST00000302206 FOXA3P55318 350 aaPredicted RBP9.12□□□□□ -0.95
TPM3-202ENST00000302206 TCL1AP56279 114 aa9.12□□□□□ -0.95
TPM3-202ENST00000302206 NDUFA6P56556 154 aa9.12□□□□□ -0.95
TPM3-202ENST00000302206 TM4SF20Q53R12 229 aa9.12□□□□□ -0.95
TPM3-202ENST00000302206 C9orf47Q6ZRZ4 202 aa9.12□□□□□ -0.95
TPM3-202ENST00000302206 KLHDC1Q8N7A1 406 aa9.12□□□□□ -0.95
TPM3-202ENST00000302206 NUP35Q8NFH5 326 aa9.12□□□□□ -0.95
TPM3-202ENST00000302206 C16orf92Q96LL3 132 aa9.12□□□□□ -0.95
TPM3-202ENST00000302206 DUX5Q96PT3 197 aa9.12□□□□□ -0.95
TPM3-202ENST00000302206 NEU1Q99519 415 aa9.12□□□□□ -0.95
TPM3-202ENST00000302206 VGLL1Q99990 258 aa9.12□□□□□ -0.95
TPM3-202ENST00000302206 C16orf95Q9H693 158 aa9.12□□□□□ -0.95
TPM3-202ENST00000302206 NRN1Q9NPD7 142 aa9.12□□□□□ -0.95
TPM3-202ENST00000302206 HIGD1CA8MV81 97 aa9.11□□□□□ -0.95
TPM3-202ENST00000302206 ZNF705FA8MVS1 300 aaPredicted RBP9.11□□□□□ -0.95
TPM3-202ENST00000302206 OVOL1O14753 267 aa9.11□□□□□ -0.95
TPM3-202ENST00000302206 CA1P00915 261 aaPredicted RBP9.11□□□□□ -0.95
TPM3-202ENST00000302206 HLA-DQA1P01909 254 aa9.11□□□□□ -0.95
TPM3-202ENST00000302206 CRIP1P50238 77 aa9.11□□□□□ -0.95
TPM3-202ENST00000302206 FAM162BQ5T6X4 162 aa9.11□□□□□ -0.95
TPM3-202ENST00000302206 IGFL4Q6B9Z1 124 aa9.11□□□□□ -0.95
TPM3-202ENST00000302206 TMEM136Q6ZRR5 245 aa9.11□□□□□ -0.95
TPM3-202ENST00000302206 RBPMS2Q6ZRY4 209 aaKnown RBP9.11□□□□□ -0.95
TPM3-202ENST00000302206 RNF182Q8N6D2 247 aa9.11□□□□□ -0.95
TPM3-202ENST00000302206 OR2D3Q8NGH3 330 aa9.11□□□□□ -0.95
TPM3-202ENST00000302206 C4orf3Q8WVX3 66 aa9.11□□□□□ -0.95
TPM3-202ENST00000302206 ESM1Q9NQ30 184 aa9.11□□□□□ -0.95
TPM3-202ENST00000302206 LENEPQ9Y5L5 61 aa9.11□□□□□ -0.95
TPM3-202ENST00000302206 IGHV4OR15-8A0A075B7B6 117 aa9.1□□□□□ -0.95
TPM3-202ENST00000302206 A0A087WW49 117 aa9.1□□□□□ -0.95
TPM3-202ENST00000302206 A0A1B0GXF2 115 aa9.1□□□□□ -0.95
TPM3-202ENST00000302206 TMEM213A2RRL7 107 aa9.1□□□□□ -0.95
TPM3-202ENST00000302206 PRAC2D3DTV9 90 aa9.1□□□□□ -0.95
TPM3-202ENST00000302206 CBLN1P23435 193 aa9.1□□□□□ -0.95
TPM3-202ENST00000302206 ZNF138P52744 262 aa9.1□□□□□ -0.95
TPM3-202ENST00000302206 RPS20P60866 119 aaKnown RBP9.1□□□□□ -0.95
TPM3-202ENST00000302206 KRTAP24-1Q3LI83 254 aa9.1□□□□□ -0.95
TPM3-202ENST00000302206 SMUG1Q53HV7 270 aa9.1□□□□□ -0.95
TPM3-202ENST00000302206 Q6AWC8 147 aa9.1□□□□□ -0.95
TPM3-202ENST00000302206 ZNF418Q8TF45 676 aaPredicted RBP9.1□□□□□ -0.95
TPM3-202ENST00000302206 C8orf49Q96NF6 230 aa9.1□□□□□ -0.95
TPM3-202ENST00000302206 MRPL18Q9H0U6 180 aaKnown RBP9.1□□□□□ -0.95
TPM3-202ENST00000302206 SVEP1Q4LDE5 3571 aa9.1□□□□□ -0.95
TPM3-202ENST00000302206 XKRY2A2RUG3 117 aa9.09□□□□□ -0.95
TPM3-202ENST00000302206 SNURFLB1AK76 121 aa9.09□□□□□ -0.95
TPM3-202ENST00000302206 SH2D1AO60880 128 aa9.09□□□□□ -0.95
TPM3-202ENST00000302206 S100A8P05109 93 aa9.09□□□□□ -0.95
TPM3-202ENST00000302206 HOXD3P31249 432 aaPredicted RBP9.09□□□□□ -0.95
TPM3-202ENST00000302206 ID1P41134 155 aa9.09□□□□□ -0.95
TPM3-202ENST00000302206 KLF5Q13887 457 aaPredicted RBP9.09□□□□□ -0.95
TPM3-202ENST00000302206 TMEM78Q5T7P6 136 aa9.09□□□□□ -0.95
TPM3-202ENST00000302206 TCF24Q7RTU0 167 aa9.09□□□□□ -0.95
TPM3-202ENST00000302206 GTSF1Q8WW33 167 aa9.09□□□□□ -0.95
TPM3-202ENST00000302206 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
TPM3-202ENST00000302206 TRBV7-9A0A0J9YWB2 115 aa9.08□□□□□ -0.96
TPM3-202ENST00000302206 A0A1B0GW15 77 aa9.08□□□□□ -0.96
TPM3-202ENST00000302206 LINC01619G3V211 115 aa9.08□□□□□ -0.96
TPM3-202ENST00000302206 SRD5A1P18405 259 aa9.08□□□□□ -0.96
TPM3-202ENST00000302206 HILS1P60008 231 aa9.08□□□□□ -0.96
TPM3-202ENST00000302206 MRPL54Q6P161 138 aaKnown RBP9.08□□□□□ -0.96
TPM3-202ENST00000302206 HIST3H2BBQ8N257 126 aa9.08□□□□□ -0.96
TPM3-202ENST00000302206 ZNF738Q8NE65 137 aa9.08□□□□□ -0.96
TPM3-202ENST00000302206 C20orf173Q96LM9 149 aa9.08□□□□□ -0.96
TPM3-202ENST00000302206 LINC00477Q96M19 166 aa9.08□□□□□ -0.96
TPM3-202ENST00000302206 JMJD8Q96S16 334 aa9.08□□□□□ -0.96
TPM3-202ENST00000302206 ASCL2Q99929 193 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms