RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 EFNA4P52798 201 aa12.18□□□□□ -0.46
DDB1-201ENST00000301764 CEND1Q8N111 149 aa12.18□□□□□ -0.46
DDB1-201ENST00000301764 TRAV26-2A0A0B4J265 109 aa12.17□□□□□ -0.46
DDB1-201ENST00000301764 NDPQ00604 133 aa12.17□□□□□ -0.46
DDB1-201ENST00000301764 C5orf64Q2M2E5 130 aa12.17□□□□□ -0.46
DDB1-201ENST00000301764 IGKV3D-20A0A0C4DH25 116 aa12.17□□□□□ -0.46
DDB1-201ENST00000301764 PROP1O75360 226 aa12.17□□□□□ -0.46
DDB1-201ENST00000301764 IGHG3P01860 377 aa12.17□□□□□ -0.46
DDB1-201ENST00000301764 ZNF503Q96F45 646 aa12.17□□□□□ -0.46
DDB1-201ENST00000301764 A0A0U1RRA0 63 aa12.17□□□□□ -0.46
DDB1-201ENST00000301764 RNF182Q8N6D2 247 aa12.16□□□□□ -0.46
DDB1-201ENST00000301764 NEU4Q8WWR8 484 aaPredicted RBP12.16□□□□□ -0.46
DDB1-201ENST00000301764 TMEM190Q8WZ59 177 aa12.16□□□□□ -0.46
DDB1-201ENST00000301764 SLC25A16P16260 332 aa12.16□□□□□ -0.46
DDB1-201ENST00000301764 GDF5OSQ5U4N7 250 aa12.16□□□□□ -0.46
DDB1-201ENST00000301764 IGHV3OR16-12A0A075B7B8 117 aa12.16□□□□□ -0.46
DDB1-201ENST00000301764 C19orf54Q5BKX5 351 aa12.16□□□□□ -0.46
DDB1-201ENST00000301764 EML5Q05BV3 1969 aa12.16□□□□□ -0.46
DDB1-201ENST00000301764 C2CD3Q4AC94 2353 aa12.16□□□□□ -0.46
DDB1-201ENST00000301764 C12orf74Q32Q52 190 aa12.16□□□□□ -0.46
DDB1-201ENST00000301764 TRBV25-1A0A075B6N4 114 aa12.15□□□□□ -0.46
DDB1-201ENST00000301764 FXYD2P54710 66 aa12.15□□□□□ -0.46
DDB1-201ENST00000301764 SPRNQ5BIV9 151 aa12.15□□□□□ -0.46
DDB1-201ENST00000301764 DDB2Q92466 427 aa12.15□□□□□ -0.46
DDB1-201ENST00000301764 COLQQ9Y215 455 aaPredicted RBP12.15□□□□□ -0.46
DDB1-201ENST00000301764 TNFRSF18Q9Y5U5 241 aa12.15□□□□□ -0.46
DDB1-201ENST00000301764 IGLV2-8P01709 118 aa12.15□□□□□ -0.46
DDB1-201ENST00000301764 SRD5A1P18405 259 aa12.15□□□□□ -0.46
DDB1-201ENST00000301764 NPC2P61916 151 aa12.15□□□□□ -0.46
DDB1-201ENST00000301764 WFDC2Q14508 124 aa12.15□□□□□ -0.46
DDB1-201ENST00000301764 DNAL4O96015 105 aa12.15□□□□□ -0.46
DDB1-201ENST00000301764 CD59P13987 128 aa12.15□□□□□ -0.46
DDB1-201ENST00000301764 Q8N8P6 123 aa12.15□□□□□ -0.46
DDB1-201ENST00000301764 DPH3P1Q9H4G8 78 aa12.14□□□□□ -0.47
DDB1-201ENST00000301764 TMEM14CQ9P0S9 112 aa12.14□□□□□ -0.47
DDB1-201ENST00000301764 SPATA12Q7Z6I5 190 aa12.14□□□□□ -0.47
DDB1-201ENST00000301764 IGKV3OR2-268A0A0C4DH90 116 aa12.14□□□□□ -0.47
DDB1-201ENST00000301764 MBD3L4A6NDZ8 208 aaPredicted RBP12.14□□□□□ -0.47
DDB1-201ENST00000301764 MBD3L3A6NE82 208 aaPredicted RBP12.14□□□□□ -0.47
DDB1-201ENST00000301764 MBD3L5A6NJ08 208 aaPredicted RBP12.14□□□□□ -0.47
DDB1-201ENST00000301764 COL8A2P25067 703 aa12.14□□□□□ -0.47
DDB1-201ENST00000301764 GATA4P43694 442 aa12.14□□□□□ -0.47
DDB1-201ENST00000301764 MBD3L2Q8NHZ7 208 aaPredicted RBP12.14□□□□□ -0.47
DDB1-201ENST00000301764 ANKHD1Q8IWZ3 2542 aaKnown RBP12.14□□□□□ -0.47
DDB1-201ENST00000301764 C2orf66Q6UXQ4 117 aa12.14□□□□□ -0.47
DDB1-201ENST00000301764 DTX2Q86UW9 622 aa12.14□□□□□ -0.47
DDB1-201ENST00000301764 GATA1P15976 413 aaPredicted RBP12.13□□□□□ -0.47
DDB1-201ENST00000301764 SNRPD3P62318 126 aaKnown RBP12.13□□□□□ -0.47
DDB1-201ENST00000301764 SIGLEC15Q6ZMC9 328 aa12.13□□□□□ -0.47
DDB1-201ENST00000301764 RNF5Q99942 180 aa12.13□□□□□ -0.47
DDB1-201ENST00000301764 C22orf46C9J442 243 aa12.13□□□□□ -0.47
DDB1-201ENST00000301764 PAX1P15863 534 aa12.13□□□□□ -0.47
DDB1-201ENST00000301764 IL17RELQ6ZVW7 336 aa12.13□□□□□ -0.47
DDB1-201ENST00000301764 PRADC1Q9BSG0 188 aa12.13□□□□□ -0.47
DDB1-201ENST00000301764 MYMXA0A1B0GTQ4 84 aa12.13□□□□□ -0.47
DDB1-201ENST00000301764 IGLV1-44P01699 117 aa12.13□□□□□ -0.47
DDB1-201ENST00000301764 PPDPFLQ8WWR9 84 aa12.13□□□□□ -0.47
DDB1-201ENST00000301764 ABHD17AQ96GS6 310 aa12.13□□□□□ -0.47
DDB1-201ENST00000301764 MRPL36Q9P0J6 103 aaKnown RBP12.13□□□□□ -0.47
DDB1-201ENST00000301764 LY6HO94772 140 aa12.12□□□□□ -0.47
DDB1-201ENST00000301764 LINC00310P59036 64 aa12.12□□□□□ -0.47
DDB1-201ENST00000301764 H3BRN7 92 aa12.12□□□□□ -0.47
DDB1-201ENST00000301764 ZNF672Q499Z4 452 aaPredicted RBP12.12□□□□□ -0.47
DDB1-201ENST00000301764 NAV3Q8IVL0 2385 aa12.12□□□□□ -0.47
DDB1-201ENST00000301764 GP9P14770 177 aa12.12□□□□□ -0.47
DDB1-201ENST00000301764 RNASE1P07998 156 aaKnown RBP12.12□□□□□ -0.47
DDB1-201ENST00000301764 EGR2P11161 476 aaPredicted RBP12.12□□□□□ -0.47
DDB1-201ENST00000301764 C2orf82Q6UX34 121 aa12.12□□□□□ -0.47
DDB1-201ENST00000301764 PAX8Q06710 450 aa12.11□□□□□ -0.47
DDB1-201ENST00000301764 E7EUB6 86 aa12.11□□□□□ -0.47
DDB1-201ENST00000301764 F8VRH5 84 aa12.11□□□□□ -0.47
DDB1-201ENST00000301764 G3V4G9 280 aa12.11□□□□□ -0.47
DDB1-201ENST00000301764 NPFFO15130 113 aa12.11□□□□□ -0.47
DDB1-201ENST00000301764 LOXP28300 417 aaPredicted RBP12.11□□□□□ -0.47
DDB1-201ENST00000301764 MSRB1Q9NZV6 116 aa12.11□□□□□ -0.47
DDB1-201ENST00000301764 TMEM131Q92545 1883 aa12.11□□□□□ -0.47
DDB1-201ENST00000301764 HLA-DMBP28068 263 aa12.11□□□□□ -0.47
DDB1-201ENST00000301764 ZNF491Q8N8L2 437 aa12.11□□□□□ -0.47
DDB1-201ENST00000301764 DYNLRB2Q8TF09 96 aa12.11□□□□□ -0.47
DDB1-201ENST00000301764 LINC00322Q6ZN03 302 aaPredicted RBP12.1□□□□□ -0.47
DDB1-201ENST00000301764 SRSF8Q9BRL6 282 aaKnown RBP12.1□□□□□ -0.47
DDB1-201ENST00000301764 K7EM74 188 aa12.1□□□□□ -0.47
DDB1-201ENST00000301764 CD28P10747 220 aa12.1□□□□□ -0.47
DDB1-201ENST00000301764 BOD1L2Q8IYS8 172 aa12.1□□□□□ -0.47
DDB1-201ENST00000301764 IGLL5B9A064 214 aa12.1□□□□□ -0.47
DDB1-201ENST00000301764 M0R2P5 195 aa12.09□□□□□ -0.47
DDB1-201ENST00000301764 OR13C6PQ8NH95 151 aa12.09□□□□□ -0.47
DDB1-201ENST00000301764 ZFHX2Q9C0A1 2572 aaPredicted RBP12.09□□□□□ -0.47
DDB1-201ENST00000301764 A0A087WWL8 130 aa12.09□□□□□ -0.47
DDB1-201ENST00000301764 HLA-DRB4P13762 266 aa12.09□□□□□ -0.47
DDB1-201ENST00000301764 RRN3P1Q2M238 152 aa12.09□□□□□ -0.47
DDB1-201ENST00000301764 HLA-DRB4X5D2U9 266 aa12.09□□□□□ -0.47
DDB1-201ENST00000301764 WNK1Q9H4A3 2382 aa12.09□□□□□ -0.47
DDB1-201ENST00000301764 HCFC1P51610 2035 aa12.09□□□□□ -0.47
DDB1-201ENST00000301764 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.09□□□□□ -0.47
DDB1-201ENST00000301764 VMO1Q7Z5L0 202 aa12.09□□□□□ -0.47
DDB1-201ENST00000301764 KLF12Q9Y4X4 402 aa12.09□□□□□ -0.47
DDB1-201ENST00000301764 C2orf16Q68DN1 1984 aa12.09□□□□□ -0.47
DDB1-201ENST00000301764 TANC2Q9HCD6 1990 aa12.09□□□□□ -0.47
DDB1-201ENST00000301764 A0A1B0GXF2 115 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms