RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 D6R8Y8 96 aa12.17□□□□□ -0.46
CHAF1A-201ENST00000301280 TRGV3P03979 118 aa12.17□□□□□ -0.46
CHAF1A-201ENST00000301280 OR5AL1P0C617 328 aa12.17□□□□□ -0.46
CHAF1A-201ENST00000301280 NEU4Q8WWR8 484 aaPredicted RBP12.17□□□□□ -0.46
CHAF1A-201ENST00000301280 TMEM190Q8WZ59 177 aa12.17□□□□□ -0.46
CHAF1A-201ENST00000301280 ZNF414Q96IQ9 312 aa12.17□□□□□ -0.46
CHAF1A-201ENST00000301280 C2orf70A6NJV1 201 aa12.17□□□□□ -0.46
CHAF1A-201ENST00000301280 LY6LH3BQJ8 138 aa12.17□□□□□ -0.46
CHAF1A-201ENST00000301280 RBX1P62877 108 aa12.17□□□□□ -0.46
CHAF1A-201ENST00000301280 GATA1P15976 413 aaPredicted RBP12.16□□□□□ -0.46
CHAF1A-201ENST00000301280 SIGLEC15Q6ZMC9 328 aa12.16□□□□□ -0.46
CHAF1A-201ENST00000301280 CTSGP08311 255 aa12.16□□□□□ -0.46
CHAF1A-201ENST00000301280 IFI27P40305 119 aaPredicted RBP12.16□□□□□ -0.46
CHAF1A-201ENST00000301280 CRIP1P50238 77 aa12.16□□□□□ -0.46
CHAF1A-201ENST00000301280 TM4SF20Q53R12 229 aa12.16□□□□□ -0.46
CHAF1A-201ENST00000301280 NAA38Q9BRA0 125 aaKnown RBP12.16□□□□□ -0.46
CHAF1A-201ENST00000301280 IGHV4-61A0A0C4DH41 118 aa12.16□□□□□ -0.46
CHAF1A-201ENST00000301280 CBY3A6NI87 242 aa12.16□□□□□ -0.46
CHAF1A-201ENST00000301280 SH2D1AO60880 128 aa12.16□□□□□ -0.46
CHAF1A-201ENST00000301280 TRBV12-3P01733 135 aa12.16□□□□□ -0.46
CHAF1A-201ENST00000301280 IGHV4-38-2P0DP08 117 aa12.16□□□□□ -0.46
CHAF1A-201ENST00000301280 BLCAPP62952 87 aa12.16□□□□□ -0.46
CHAF1A-201ENST00000301280 LOXL1Q08397 574 aaPredicted RBP12.16□□□□□ -0.46
CHAF1A-201ENST00000301280 F6UB75 175 aa12.15□□□□□ -0.46
CHAF1A-201ENST00000301280 LTAP01374 205 aa12.15□□□□□ -0.46
CHAF1A-201ENST00000301280 CKS2P33552 79 aa12.15□□□□□ -0.46
CHAF1A-201ENST00000301280 MRPL27Q9P0M9 148 aaKnown RBP12.15□□□□□ -0.46
CHAF1A-201ENST00000301280 CBY1Q9Y3M2 126 aa12.15□□□□□ -0.46
CHAF1A-201ENST00000301280 LOC102724200A0A096LPH7 203 aaPredicted RBP12.15□□□□□ -0.46
CHAF1A-201ENST00000301280 H3BUX3 64 aa12.15□□□□□ -0.46
CHAF1A-201ENST00000301280 PSG3Q16557 428 aa12.15□□□□□ -0.46
CHAF1A-201ENST00000301280 AGRNO00468 2067 aa12.15□□□□□ -0.47
CHAF1A-201ENST00000301280 ZNF80P51504 273 aaPredicted RBP12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 KHDC1LQ5JSQ8 128 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 SRSF8Q9BRL6 282 aaKnown RBP12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 EFNA4P52798 201 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 IL17RELQ6ZVW7 336 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 Q8N9W7 124 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 RNF5Q99942 180 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 MLST8Q9BVC4 326 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 TRAV26-2A0A0B4J265 109 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 HSBP1L1C9JCN9 74 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 H3BRN7 92 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 GAS8-AS1O95177 125 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 IGHV4-39P01824 125 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 RPL7P18124 248 aaKnown RBP12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 PTTG1IPP53801 180 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 FOXE3Q13461 319 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 Q6ZS46 218 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 LY6G5BQ8NDX9 201 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 OR11H6Q8NGC7 330 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 C16orf92Q96LL3 132 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 CCL19Q99731 98 aa12.14□□□□□ -0.47
CHAF1A-201ENST00000301280 MXRA5Q9NR99 2828 aa12.13□□□□□ -0.47
CHAF1A-201ENST00000301280 IGHV1-24A0A0C4DH33 117 aa12.13□□□□□ -0.47
CHAF1A-201ENST00000301280 RIGQ13278 110 aa12.13□□□□□ -0.47
CHAF1A-201ENST00000301280 TMEM70Q9BUB7 260 aa12.13□□□□□ -0.47
CHAF1A-201ENST00000301280 AP5S1Q9NUS5 200 aa12.13□□□□□ -0.47
CHAF1A-201ENST00000301280 C20orf202A1L168 122 aa12.13□□□□□ -0.47
CHAF1A-201ENST00000301280 NPFFO15130 113 aa12.13□□□□□ -0.47
CHAF1A-201ENST00000301280 GOSR1O95249 250 aa12.13□□□□□ -0.47
CHAF1A-201ENST00000301280 EGR2P11161 476 aaPredicted RBP12.13□□□□□ -0.47
CHAF1A-201ENST00000301280 COX11Q9Y6N1 276 aa12.13□□□□□ -0.47
CHAF1A-201ENST00000301280 CHD6Q8TD26 2715 aa12.12□□□□□ -0.47
CHAF1A-201ENST00000301280 FLNAP21333 2647 aaKnown RBP12.12□□□□□ -0.47
CHAF1A-201ENST00000301280 IGLV11-55A0A075B6I3 123 aa12.12□□□□□ -0.47
CHAF1A-201ENST00000301280 TRBV6-1A0A0K0K1D8 114 aa12.12□□□□□ -0.47
CHAF1A-201ENST00000301280 IGF1P05019 195 aa12.12□□□□□ -0.47
CHAF1A-201ENST00000301280 ORAOV1Q8WV07 137 aa12.12□□□□□ -0.47
CHAF1A-201ENST00000301280 ITLN2Q8WWU7 325 aaPredicted RBP12.12□□□□□ -0.47
CHAF1A-201ENST00000301280 M0R381 172 aa12.12□□□□□ -0.47
CHAF1A-201ENST00000301280 IGLV2-11P01706 119 aa12.12□□□□□ -0.47
CHAF1A-201ENST00000301280 C16orf54Q6UWD8 224 aa12.12□□□□□ -0.47
CHAF1A-201ENST00000301280 C11orf44Q8N8P7 122 aa12.11□□□□□ -0.47
CHAF1A-201ENST00000301280 ZNF738Q8NE65 137 aa12.11□□□□□ -0.47
CHAF1A-201ENST00000301280 PRSS22Q9GZN4 317 aa12.11□□□□□ -0.47
CHAF1A-201ENST00000301280 TRAV9-2A0A087WT02 112 aa12.11□□□□□ -0.47
CHAF1A-201ENST00000301280 CENPVL3A0A0U1RRI6 287 aa12.11□□□□□ -0.47
CHAF1A-201ENST00000301280 A0A1B0GXF2 115 aa12.11□□□□□ -0.47
CHAF1A-201ENST00000301280 OVOL3O00110 214 aa12.11□□□□□ -0.47
CHAF1A-201ENST00000301280 PRELID3AQ96N28 172 aa12.11□□□□□ -0.47
CHAF1A-201ENST00000301280 NDFIP1Q9BT67 221 aa12.11□□□□□ -0.47
CHAF1A-201ENST00000301280 MRPS16Q9Y3D3 137 aaKnown RBP12.11□□□□□ -0.47
CHAF1A-201ENST00000301280 IGHV4-30-2A0A087WSY4 118 aa12.1□□□□□ -0.47
CHAF1A-201ENST00000301280 IGHV2-70DA0A0C4DH43 119 aa12.1□□□□□ -0.47
CHAF1A-201ENST00000301280 M0R1W7 72 aa12.1□□□□□ -0.47
CHAF1A-201ENST00000301280 S100A4P26447 101 aaKnown RBP12.1□□□□□ -0.47
CHAF1A-201ENST00000301280 KLF5Q13887 457 aaPredicted RBP12.1□□□□□ -0.47
CHAF1A-201ENST00000301280 TMEM14CQ9P0S9 112 aa12.1□□□□□ -0.47
CHAF1A-201ENST00000301280 RNF24Q9Y225 148 aa12.1□□□□□ -0.47
CHAF1A-201ENST00000301280 NMUP48645 174 aa12.1□□□□□ -0.47
CHAF1A-201ENST00000301280 UBE2V1Q13404 147 aa12.1□□□□□ -0.47
CHAF1A-201ENST00000301280 CT83Q5H943 113 aa12.1□□□□□ -0.47
CHAF1A-201ENST00000301280 C11orf71Q6IPW1 123 aa12.1□□□□□ -0.47
CHAF1A-201ENST00000301280 MAP1LC3CQ9BXW4 147 aa12.1□□□□□ -0.47
CHAF1A-201ENST00000301280 C10orf99Q6UWK7 81 aa12.09□□□□□ -0.47
CHAF1A-201ENST00000301280 PRSS57Q6UWY2 283 aa12.09□□□□□ -0.47
CHAF1A-201ENST00000301280 A0A087X0K7 114 aa12.09□□□□□ -0.47
CHAF1A-201ENST00000301280 SCGB2A1O75556 95 aa12.09□□□□□ -0.47
CHAF1A-201ENST00000301280 NUDT3O95989 172 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms