RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 BEX4Q9NWD9 120 aaPredicted RBP11.38□□□□□ -0.59
CDT1-201ENST00000301019 IGHV1-2P23083 117 aa11.37□□□□□ -0.59
CDT1-201ENST00000301019 PIEZO2Q9H5I5 2752 aa11.37□□□□□ -0.59
CDT1-201ENST00000301019 RAX2Q96IS3 184 aa11.37□□□□□ -0.59
CDT1-201ENST00000301019 PROCRQ9UNN8 238 aa11.37□□□□□ -0.59
CDT1-201ENST00000301019 PTPRZ1P23471 2315 aaPredicted RBP11.37□□□□□ -0.59
CDT1-201ENST00000301019 IQCF6A8MYZ5 107 aa11.37□□□□□ -0.59
CDT1-201ENST00000301019 J3KRW8 73 aa11.37□□□□□ -0.59
CDT1-201ENST00000301019 DPM2O94777 84 aa11.37□□□□□ -0.59
CDT1-201ENST00000301019 GP9P14770 177 aa11.37□□□□□ -0.59
CDT1-201ENST00000301019 CNTFRP26992 372 aa11.37□□□□□ -0.59
CDT1-201ENST00000301019 KLRD1Q13241 179 aa11.37□□□□□ -0.59
CDT1-201ENST00000301019 FAM159AQ6UWV7 190 aa11.37□□□□□ -0.59
CDT1-201ENST00000301019 ZNF502Q8TBZ5 544 aa11.37□□□□□ -0.59
CDT1-201ENST00000301019 MORN3Q6PF18 240 aaPredicted RBP11.36□□□□□ -0.59
CDT1-201ENST00000301019 PRSS33Q8NF86 280 aa11.36□□□□□ -0.59
CDT1-201ENST00000301019 C8orf46Q8TAG6 207 aa11.36□□□□□ -0.59
CDT1-201ENST00000301019 IGKV3D-15A0A087WSY6 115 aa11.36□□□□□ -0.59
CDT1-201ENST00000301019 A0A1W2PPI3 338 aa11.36□□□□□ -0.59
CDT1-201ENST00000301019 OR11H12B2RN74 326 aa11.36□□□□□ -0.59
CDT1-201ENST00000301019 NHLRC4P0CG21 123 aaPredicted RBP11.36□□□□□ -0.59
CDT1-201ENST00000301019 WT1P19544 449 aaPredicted RBP11.36□□□□□ -0.59
CDT1-201ENST00000301019 TTC32Q5I0X7 151 aa11.36□□□□□ -0.59
CDT1-201ENST00000301019 OR11H1Q8NG94 326 aa11.36□□□□□ -0.59
CDT1-201ENST00000301019 OR11H2Q8NH07 326 aa11.36□□□□□ -0.59
CDT1-201ENST00000301019 GFRA4Q9GZZ7 299 aa11.36□□□□□ -0.59
CDT1-201ENST00000301019 OVOL3O00110 214 aa11.35□□□□□ -0.59
CDT1-201ENST00000301019 OTOGLQ3ZCN5 2332 aa11.35□□□□□ -0.59
CDT1-201ENST00000301019 KIR2DS2P43631 304 aa11.35□□□□□ -0.59
CDT1-201ENST00000301019 CT83Q5H943 113 aa11.35□□□□□ -0.59
CDT1-201ENST00000301019 NDUFA4L2Q9NRX3 87 aa11.35□□□□□ -0.59
CDT1-201ENST00000301019 HIGD1AQ9Y241 93 aa11.35□□□□□ -0.59
CDT1-201ENST00000301019 HLA-DMBP28068 263 aa11.35□□□□□ -0.59
CDT1-201ENST00000301019 MSMPQ1L6U9 139 aa11.35□□□□□ -0.59
CDT1-201ENST00000301019 CFAP126Q5VTH2 177 aa11.35□□□□□ -0.59
CDT1-201ENST00000301019 SPRY4Q9C004 299 aa11.35□□□□□ -0.59
CDT1-201ENST00000301019 NCBP2LA6PVI3 153 aaKnown RBP11.34□□□□□ -0.59
CDT1-201ENST00000301019 IGHV3-23P01764 117 aa11.34□□□□□ -0.59
CDT1-201ENST00000301019 GAGE2BQ13066 116 aa11.34□□□□□ -0.59
CDT1-201ENST00000301019 GAGE2EQ4V326 116 aa11.34□□□□□ -0.59
CDT1-201ENST00000301019 ANKRD29Q8N6D5 301 aa11.34□□□□□ -0.59
CDT1-201ENST00000301019 DLX4Q92988 240 aaPredicted RBP11.34□□□□□ -0.59
CDT1-201ENST00000301019 MAP1LC3AQ9H492 121 aa11.34□□□□□ -0.59
CDT1-201ENST00000301019 GAGE2DQ9UEU5 116 aa11.34□□□□□ -0.59
CDT1-201ENST00000301019 EP300Q09472 2414 aaPredicted RBP11.34□□□□□ -0.59
CDT1-201ENST00000301019 SH2D1AO60880 128 aa11.34□□□□□ -0.59
CDT1-201ENST00000301019 SRSF6Q13247 344 aaKnown RBP11.34□□□□□ -0.59
CDT1-201ENST00000301019 MRPL23Q16540 153 aaKnown RBP11.34□□□□□ -0.59
CDT1-201ENST00000301019 OR10X1Q8NGY0 326 aa11.34□□□□□ -0.59
CDT1-201ENST00000301019 LRBAP50851 2863 aa11.34□□□□□ -0.59
CDT1-201ENST00000301019 CRIP2P52943 208 aaPredicted RBP11.33□□□□□ -0.59
CDT1-201ENST00000301019 PPDPFQ9H3Y8 114 aa11.33□□□□□ -0.59
CDT1-201ENST00000301019 MAP1AP78559 2803 aaPredicted RBP11.33□□□□□ -0.6
CDT1-201ENST00000301019 CECR9P0C854 216 aa11.33□□□□□ -0.6
CDT1-201ENST00000301019 SLC25A39Q9BZJ4 359 aaPredicted RBP11.33□□□□□ -0.6
CDT1-201ENST00000301019 MALRD1Q5VYJ5 2156 aa11.33□□□□□ -0.6
CDT1-201ENST00000301019 ARL3P36405 182 aa11.33□□□□□ -0.6
CDT1-201ENST00000301019 TRPT1Q86TN4 253 aaKnown RBP11.33□□□□□ -0.6
CDT1-201ENST00000301019 DPF1Q92782 380 aa11.33□□□□□ -0.6
CDT1-201ENST00000301019 PLEKHB2Q96CS7 222 aa11.33□□□□□ -0.6
CDT1-201ENST00000301019 COL27A1Q8IZC6 1860 aaPredicted RBP11.33□□□□□ -0.6
CDT1-201ENST00000301019 IGHV3OR16-13A0A075B7E8 117 aa11.32□□□□□ -0.6
CDT1-201ENST00000301019 IGHV3-74A0A0B4J1X5 117 aa11.32□□□□□ -0.6
CDT1-201ENST00000301019 EGR2P11161 476 aaPredicted RBP11.32□□□□□ -0.6
CDT1-201ENST00000301019 FBXL15Q9H469 300 aa11.32□□□□□ -0.6
CDT1-201ENST00000301019 GAGE12JA6NER3 117 aa11.32□□□□□ -0.6
CDT1-201ENST00000301019 SNCGO76070 127 aa11.32□□□□□ -0.6
CDT1-201ENST00000301019 GAGE7O76087 117 aa11.32□□□□□ -0.6
CDT1-201ENST00000301019 TNFRSF6BO95407 300 aa11.32□□□□□ -0.6
CDT1-201ENST00000301019 TCL1BO95988 128 aa11.32□□□□□ -0.6
CDT1-201ENST00000301019 GAGE12FP0CL80 117 aa11.32□□□□□ -0.6
CDT1-201ENST00000301019 GAGE12GP0CL81 117 aa11.32□□□□□ -0.6
CDT1-201ENST00000301019 GAGE12IP0CL82 117 aa11.32□□□□□ -0.6
CDT1-201ENST00000301019 ATP5J2P56134 94 aa11.32□□□□□ -0.6
CDT1-201ENST00000301019 GAGE4Q13068 117 aa11.32□□□□□ -0.6
CDT1-201ENST00000301019 ATP1A1-AS1Q5TC04 95 aa11.32□□□□□ -0.6
CDT1-201ENST00000301019 ZNF80P51504 273 aaPredicted RBP11.31□□□□□ -0.6
CDT1-201ENST00000301019 SUB1P53999 127 aaKnown RBP eCLIP11.31□□□□□ -0.61e-6■■□□□ 12.6
CDT1-201ENST00000301019 TMEM155Q4W5P6 130 aa11.31□□□□□ -0.6
CDT1-201ENST00000301019 C9JAW5 83 aa11.31□□□□□ -0.6
CDT1-201ENST00000301019 AAMDCQ9H7C9 122 aa11.31□□□□□ -0.6
CDT1-201ENST00000301019 A6NJY4 79 aa11.3□□□□□ -0.6
CDT1-201ENST00000301019 PIP4P1Q86T03 277 aa11.3□□□□□ -0.6
CDT1-201ENST00000301019 ONECUT1Q9UBC0 465 aa11.3□□□□□ -0.6
CDT1-201ENST00000301019 A0A1W2PNU3 283 aaPredicted RBP11.3□□□□□ -0.6
CDT1-201ENST00000301019 ZNF815PA8K554 130 aa11.3□□□□□ -0.6
CDT1-201ENST00000301019 CCL8P80075 99 aa11.3□□□□□ -0.6
CDT1-201ENST00000301019 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.3□□□□□ -0.6
CDT1-201ENST00000301019 MYOZ3Q8TDC0 251 aa11.3□□□□□ -0.6
CDT1-201ENST00000301019 OTORQ9NRC9 128 aa11.3□□□□□ -0.6
CDT1-201ENST00000301019 TRGV3P03979 118 aa11.3□□□□□ -0.6
CDT1-201ENST00000301019 MEOX1P50221 254 aa11.3□□□□□ -0.6
CDT1-201ENST00000301019 NDUFV3P56181 108 aaKnown RBP11.3□□□□□ -0.6
CDT1-201ENST00000301019 MEIG1Q5JSS6 88 aa11.3□□□□□ -0.6
CDT1-201ENST00000301019 ZNF688P0C7X2 276 aa11.29□□□□□ -0.6
CDT1-201ENST00000301019 RPL7P18124 248 aaKnown RBP11.29□□□□□ -0.6
CDT1-201ENST00000301019 CD40P25942 277 aa11.29□□□□□ -0.6
CDT1-201ENST00000301019 DEFB124Q8NES8 71 aa11.29□□□□□ -0.6
CDT1-201ENST00000301019 PPDPFLQ8WWR9 84 aa11.29□□□□□ -0.6
CDT1-201ENST00000301019 DOPEY2Q9Y3R5 2298 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms