RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 ATP5G1P05496 136 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 TRAV40A0A0B4J280 105 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 ZNF561-AS1K7EIQ3 104 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 RNASE2P10153 161 aaKnown RBP9.17□□□□□ -0.94
GCN1-201ENST00000300648 ATOX1O00244 68 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 EREGO14944 169 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 IGHV2-5P01817 119 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 CELA3AP09093 270 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 SPATA25Q9BR10 227 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 B4DSR2 109 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 NTF4P34130 210 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 C17orf82Q86X59 251 aaPredicted RBP9.17□□□□□ -0.94
GCN1-201ENST00000300648 DMRTC2Q8IXT2 367 aaPredicted RBP9.17□□□□□ -0.94
GCN1-201ENST00000300648 NOTCH2Q04721 2471 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 IGHV3OR16-8A0A075B7F1 116 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 KIAA1671Q9BY89 1806 aa9.16□□□□□ -0.94
GCN1-201ENST00000300648 FOXG1P55316 489 aaPredicted RBP9.16□□□□□ -0.94
GCN1-201ENST00000300648 A0A0U1RRA0 63 aa9.16□□□□□ -0.94
GCN1-201ENST00000300648 TGFBR3LH3BV60 316 aa9.16□□□□□ -0.94
GCN1-201ENST00000300648 PSCAO43653 123 aa9.16□□□□□ -0.94
GCN1-201ENST00000300648 IL15RAQ13261 267 aa9.16□□□□□ -0.94
GCN1-201ENST00000300648 ZNF474Q6S9Z5 364 aaPredicted RBP9.16□□□□□ -0.94
GCN1-201ENST00000300648 ZNF837Q96EG3 531 aaPredicted RBP9.16□□□□□ -0.94
GCN1-201ENST00000300648 IGHV3OR16-10A0A075B7F0 116 aa9.16□□□□□ -0.94
GCN1-201ENST00000300648 IGKV1-12A0A0C4DH73 117 aa9.16□□□□□ -0.94
GCN1-201ENST00000300648 IGKV1D-12P01611 117 aa9.16□□□□□ -0.94
GCN1-201ENST00000300648 ADCYAP1P18509 176 aa9.16□□□□□ -0.94
GCN1-201ENST00000300648 TCF15Q12870 199 aa9.16□□□□□ -0.94
GCN1-201ENST00000300648 PNRC2Q9NPJ4 139 aaKnown RBP9.16□□□□□ -0.94
GCN1-201ENST00000300648 ZNF493Q6ZR52 646 aa9.15□□□□□ -0.94
GCN1-201ENST00000300648 Q6P435 159 aa9.15□□□□□ -0.94
GCN1-201ENST00000300648 LENEPQ9Y5L5 61 aa9.15□□□□□ -0.94
GCN1-201ENST00000300648 V9GYY9 64 aa9.15□□□□□ -0.94
GCN1-201ENST00000300648 GGNQ86UU5 652 aa9.15□□□□□ -0.94
GCN1-201ENST00000300648 RNF152Q8N8N0 203 aa9.15□□□□□ -0.94
GCN1-201ENST00000300648 IGKV1-27A0A075B6S5 117 aa9.15□□□□□ -0.95
GCN1-201ENST00000300648 HERV-K104P63124 156 aa9.15□□□□□ -0.95
GCN1-201ENST00000300648 C11orf52Q96A22 123 aa9.15□□□□□ -0.95
GCN1-201ENST00000300648 SAP30O75446 220 aa9.15□□□□□ -0.95
GCN1-201ENST00000300648 ETDBQ3ZM63 59 aa9.15□□□□□ -0.95
GCN1-201ENST00000300648 FAM201AQ5SY85 155 aa9.15□□□□□ -0.95
GCN1-201ENST00000300648 GATA4P43694 442 aa9.14□□□□□ -0.95
GCN1-201ENST00000300648 CARD19Q96LW7 228 aa9.14□□□□□ -0.95
GCN1-201ENST00000300648 SS18L2Q9UHA2 77 aa9.14□□□□□ -0.95
GCN1-201ENST00000300648 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.14□□□□□ -0.95
GCN1-201ENST00000300648 CRLF1O75462 422 aa9.14□□□□□ -0.95
GCN1-201ENST00000300648 IGFBPL1Q8WX77 278 aa9.14□□□□□ -0.95
GCN1-201ENST00000300648 NAA38Q9BRA0 125 aaKnown RBP9.14□□□□□ -0.95
GCN1-201ENST00000300648 TRAV13-1A0A0B4J241 112 aa9.14□□□□□ -0.95
GCN1-201ENST00000300648 CDKN1AP38936 164 aa9.14□□□□□ -0.95
GCN1-201ENST00000300648 CTSBP07858 339 aa9.14□□□□□ -0.95
GCN1-201ENST00000300648 C5orf47Q569G3 176 aa9.14□□□□□ -0.95
GCN1-201ENST00000300648 FOXL2NBQ6ZUU3 175 aa9.14□□□□□ -0.95
GCN1-201ENST00000300648 ARMS2P0C7Q2 107 aa9.14□□□□□ -0.95
GCN1-201ENST00000300648 SMIM2Q9BVW6 85 aa9.14□□□□□ -0.95
GCN1-201ENST00000300648 RBAKDNA6NC62 111 aa9.13□□□□□ -0.95
GCN1-201ENST00000300648 NPYP01303 97 aa9.13□□□□□ -0.95
GCN1-201ENST00000300648 BMPERQ8N8U9 685 aa9.13□□□□□ -0.95
GCN1-201ENST00000300648 NDUFA12Q9UI09 145 aa9.13□□□□□ -0.95
GCN1-201ENST00000300648 KLF5Q13887 457 aaPredicted RBP9.13□□□□□ -0.95
GCN1-201ENST00000300648 THAP8Q8NA92 274 aa9.13□□□□□ -0.95
GCN1-201ENST00000300648 KIF26AQ9ULI4 1882 aaPredicted RBP9.13□□□□□ -0.95
GCN1-201ENST00000300648 B5MCH6 92 aa9.13□□□□□ -0.95
GCN1-201ENST00000300648 SVIPQ8NHG7 77 aa9.13□□□□□ -0.95
GCN1-201ENST00000300648 RSPO4Q2I0M5 234 aaPredicted RBP9.13□□□□□ -0.95
GCN1-201ENST00000300648 TMEM243Q9BU79 118 aa9.13□□□□□ -0.95
GCN1-201ENST00000300648 TRBV19A0A075B6N1 114 aa9.13□□□□□ -0.95
GCN1-201ENST00000300648 FUSP35637 526 aaKnown RBP eCLIP9.13□□□□□ -0.95
GCN1-201ENST00000300648 CD33P20138 364 aa9.13□□□□□ -0.95
GCN1-201ENST00000300648 MST1P26927 711 aa9.13□□□□□ -0.95
GCN1-201ENST00000300648 FLVCR1-AS1Q8TAF5 88 aa9.13□□□□□ -0.95
GCN1-201ENST00000300648 V9GYV3 84 aa9.13□□□□□ -0.95
GCN1-201ENST00000300648 FAM110DQ8TAY7 271 aaPredicted RBP9.12□□□□□ -0.95
GCN1-201ENST00000300648 RHPN1-AS1Q9BWJ2 59 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 NDUFA4L2Q9NRX3 87 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 ORMDL1Q9P0S3 153 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 LINC00473A8K010 186 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 SDHAF1A6NFY7 115 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 ZNF672Q499Z4 452 aaPredicted RBP9.12□□□□□ -0.95
GCN1-201ENST00000300648 Q8TAT8 98 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 HS3ST6Q96QI5 342 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 MBD3L4A6NDZ8 208 aaPredicted RBP9.12□□□□□ -0.95
GCN1-201ENST00000300648 MBD3L3A6NE82 208 aaPredicted RBP9.12□□□□□ -0.95
GCN1-201ENST00000300648 MBD3L5A6NJ08 208 aaPredicted RBP9.12□□□□□ -0.95
GCN1-201ENST00000300648 LMO1P25800 156 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 KLRD1Q13241 179 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 MBD3L2Q8NHZ7 208 aaPredicted RBP9.12□□□□□ -0.95
GCN1-201ENST00000300648 CEP192Q8TEP8 1941 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 J3QQQ9 107 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 H0YGX0 51 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 PSPNO60542 156 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 C1orf122Q6ZSJ8 110 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 Q6ZWC4 215 aa9.12□□□□□ -0.95
GCN1-201ENST00000300648 CD177Q8N6Q3 437 aa9.11□□□□□ -0.95
GCN1-201ENST00000300648 MRPL53Q96EL3 112 aaKnown RBP9.11□□□□□ -0.95
GCN1-201ENST00000300648 HIVEP2P31629 2446 aa9.11□□□□□ -0.95
GCN1-201ENST00000300648 IGHV1-69DA0A0B4J2H0 117 aa9.11□□□□□ -0.95
GCN1-201ENST00000300648 KIR2DL5BA0A0G2JN68 375 aa9.11□□□□□ -0.95
GCN1-201ENST00000300648 KIR2DL5BA0A0G2JPC4 375 aa9.11□□□□□ -0.95
GCN1-201ENST00000300648 KIR2DL5AQ8N109 375 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms