RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TCRAP04437 139 aa15.69■□□□□ 0.1
SMCO4-201ENST00000298966 RPL35P42766 123 aaKnown RBP15.69■□□□□ 0.1
SMCO4-201ENST00000298966 RPL23P62829 140 aaKnown RBP15.69■□□□□ 0.1
SMCO4-201ENST00000298966 C17orf77Q96MU5 243 aa15.69■□□□□ 0.1
SMCO4-201ENST00000298966 SLC17A3O00476 420 aa15.68■□□□□ 0.1
SMCO4-201ENST00000298966 SNRPCP09234 159 aaKnown RBP15.68■□□□□ 0.1
SMCO4-201ENST00000298966 FOLR2P14207 255 aa15.68■□□□□ 0.1
SMCO4-201ENST00000298966 TCF24Q7RTU0 167 aa15.68■□□□□ 0.1
SMCO4-201ENST00000298966 SMIM12Q96EX1 92 aa15.68■□□□□ 0.1
SMCO4-201ENST00000298966 RPS10P5Q9NQ39 176 aa15.68■□□□□ 0.1
SMCO4-201ENST00000298966 MLXQ9UH92 298 aa15.68■□□□□ 0.1
SMCO4-201ENST00000298966 KLF12Q9Y4X4 402 aa15.68■□□□□ 0.1
SMCO4-201ENST00000298966 HERC2O95714 4834 aa15.68■□□□□ 0.1
SMCO4-201ENST00000298966 TRBV20OR9-2A0A075B6H5 130 aa15.67■□□□□ 0.1
SMCO4-201ENST00000298966 TRBV6-1A0A0K0K1D8 114 aa15.67■□□□□ 0.1
SMCO4-201ENST00000298966 ISLRO14498 428 aa15.67■□□□□ 0.1
SMCO4-201ENST00000298966 BTN1A1Q13410 526 aa15.67■□□□□ 0.1
SMCO4-201ENST00000298966 TMEM183BQ1AE95 376 aa15.67■□□□□ 0.1
SMCO4-201ENST00000298966 EXOC3-AS1Q8N2X6 119 aa15.67■□□□□ 0.1
SMCO4-201ENST00000298966 FMC1Q96HJ9 113 aa15.67■□□□□ 0.1
SMCO4-201ENST00000298966 TRAV2A0A0B4J234 112 aa15.66■□□□□ 0.1
SMCO4-201ENST00000298966 RBMY1BA6NDE4 496 aaKnown RBP15.66■□□□□ 0.1
SMCO4-201ENST00000298966 RBMY1EA6NEQ0 496 aaKnown RBP15.66■□□□□ 0.1
SMCO4-201ENST00000298966 DNASE2O00115 360 aaPredicted RBP15.66■□□□□ 0.1
SMCO4-201ENST00000298966 RBMY1DP0C7P1 496 aaKnown RBP15.66■□□□□ 0.1
SMCO4-201ENST00000298966 ID1P41134 155 aa15.66■□□□□ 0.1
SMCO4-201ENST00000298966 UBE2G1P62253 170 aa15.66■□□□□ 0.1
SMCO4-201ENST00000298966 ADIRFQ15847 76 aa15.66■□□□□ 0.1
SMCO4-201ENST00000298966 LINC01551Q86U37 167 aa15.66■□□□□ 0.1
SMCO4-201ENST00000298966 C16orf92Q96LL3 132 aa15.66■□□□□ 0.1
SMCO4-201ENST00000298966 SMCO4Q9NRQ5 59 aa15.66■□□□□ 0.1
SMCO4-201ENST00000298966 TSPAN4O14817 238 aa15.65■□□□□ 0.1
SMCO4-201ENST00000298966 GNG4P50150 75 aa15.65■□□□□ 0.1
SMCO4-201ENST00000298966 RPL11P62913 178 aaKnown RBP15.65■□□□□ 0.1
SMCO4-201ENST00000298966 PAFAH1B2P68402 229 aa15.65■□□□□ 0.1
SMCO4-201ENST00000298966 GTSCR1Q86UQ5 136 aa15.65■□□□□ 0.1
SMCO4-201ENST00000298966 TMEM75Q8N9X5 138 aa15.65■□□□□ 0.1
SMCO4-201ENST00000298966 IGF2BP2-AS1Q96M15 143 aa15.65■□□□□ 0.1
SMCO4-201ENST00000298966 RETNQ9HD89 108 aa15.65■□□□□ 0.1
SMCO4-201ENST00000298966 TRAV25A0A0B4J276 109 aa15.64■□□□□ 0.09
SMCO4-201ENST00000298966 RBAKDNA6NC62 111 aa15.64■□□□□ 0.09
SMCO4-201ENST00000298966 DIRC3C9JPN6 131 aa15.64■□□□□ 0.09
SMCO4-201ENST00000298966 CSN3P07498 182 aa15.64■□□□□ 0.09
SMCO4-201ENST00000298966 GNG5P63218 68 aa15.64■□□□□ 0.09
SMCO4-201ENST00000298966 CENPWQ5EE01 88 aa15.64■□□□□ 0.09
SMCO4-201ENST00000298966 CTDSP1Q9GZU7 261 aa15.64■□□□□ 0.09
SMCO4-201ENST00000298966 SOCS3O14543 225 aa15.63■□□□□ 0.09
SMCO4-201ENST00000298966 MT-ND4LP03901 98 aa15.63■□□□□ 0.09
SMCO4-201ENST00000298966 DYNLRB2Q8TF09 96 aa15.63■□□□□ 0.09
SMCO4-201ENST00000298966 FAM110AQ9BQ89 295 aa15.63■□□□□ 0.09
SMCO4-201ENST00000298966 TMEM242Q9NWH2 141 aa15.63■□□□□ 0.09
SMCO4-201ENST00000298966 PSG3Q16557 428 aa15.62■□□□□ 0.09
SMCO4-201ENST00000298966 LCN12Q6JVE5 192 aa15.62■□□□□ 0.09
SMCO4-201ENST00000298966 CBLN2Q8IUK8 224 aa15.62■□□□□ 0.09
SMCO4-201ENST00000298966 OCC1Q8TAD7 63 aa15.62■□□□□ 0.09
SMCO4-201ENST00000298966 LINC00476Q8WZB0 136 aa15.62■□□□□ 0.09
SMCO4-201ENST00000298966 ISOC2Q96AB3 205 aa15.62■□□□□ 0.09
SMCO4-201ENST00000298966 BIN3Q9NQY0 253 aa15.62■□□□□ 0.09
SMCO4-201ENST00000298966 FRAS1Q86XX4 4008 aa15.61■□□□□ 0.09
SMCO4-201ENST00000298966 TRAV8-2A0A0B4J237 113 aa15.61■□□□□ 0.09
SMCO4-201ENST00000298966 CXorf65A6NEN9 183 aa15.61■□□□□ 0.09
SMCO4-201ENST00000298966 TMEM88Q6PEY1 159 aa15.61■□□□□ 0.09
SMCO4-201ENST00000298966 GOLT1AQ6ZVE7 132 aa15.61■□□□□ 0.09
SMCO4-201ENST00000298966 ANAPC16Q96DE5 110 aa15.61■□□□□ 0.09
SMCO4-201ENST00000298966 M0R3E3 92 aa15.6■□□□□ 0.09
SMCO4-201ENST00000298966 RNF212Q495C1 297 aa15.6■□□□□ 0.09
SMCO4-201ENST00000298966 RBPMS2Q6ZRY4 209 aaKnown RBP15.6■□□□□ 0.09
SMCO4-201ENST00000298966 OR2K2Q8NGT1 345 aa15.6■□□□□ 0.09
SMCO4-201ENST00000298966 DCANP1Q8TF63 244 aa15.6■□□□□ 0.09
SMCO4-201ENST00000298966 RPH3ALQ9UNE2 315 aa15.6■□□□□ 0.09
SMCO4-201ENST00000298966 ZFP30Q9Y2G7 519 aa15.6■□□□□ 0.09
SMCO4-201ENST00000298966 PGPEP1LA6NFU8 196 aa15.59■□□□□ 0.09
SMCO4-201ENST00000298966 PPP1R2P9O14990 202 aa15.59■□□□□ 0.09
SMCO4-201ENST00000298966 IGLV2-8P01709 118 aa15.59■□□□□ 0.09
SMCO4-201ENST00000298966 SNRPD3P62318 126 aaKnown RBP15.59■□□□□ 0.09
SMCO4-201ENST00000298966 FLI1Q01543 452 aaPredicted RBP15.59■□□□□ 0.09
SMCO4-201ENST00000298966 BAGE2Q86Y30 109 aa15.59■□□□□ 0.09
SMCO4-201ENST00000298966 LINC00479Q96M42 142 aa15.59■□□□□ 0.09
SMCO4-201ENST00000298966 MS4A6AQ9H2W1 248 aa15.59■□□□□ 0.09
SMCO4-201ENST00000298966 K7EQG2 157 aa15.58■□□□□ 0.08
SMCO4-201ENST00000298966 LY6G6CO95867 125 aa15.58■□□□□ 0.08
SMCO4-201ENST00000298966 LTAP01374 205 aa15.58■□□□□ 0.08
SMCO4-201ENST00000298966 EDN2P20800 178 aa15.58■□□□□ 0.08
SMCO4-201ENST00000298966 DEFB114Q30KQ6 69 aa15.58■□□□□ 0.08
SMCO4-201ENST00000298966 SPAG8Q99932 426 aaPredicted RBP15.58■□□□□ 0.08
SMCO4-201ENST00000298966 TRAV34A0A0B4J273 112 aa15.57■□□□□ 0.08
SMCO4-201ENST00000298966 K7EN84 100 aa15.57■□□□□ 0.08
SMCO4-201ENST00000298966 GCGP01275 180 aa15.57■□□□□ 0.08
SMCO4-201ENST00000298966 SAPCD1Q5SSQ6 148 aa15.57■□□□□ 0.08
SMCO4-201ENST00000298966 Q86TA4 180 aa15.57■□□□□ 0.08
SMCO4-201ENST00000298966 SFRP2Q96HF1 295 aa15.57■□□□□ 0.08
SMCO4-201ENST00000298966 PPP1R14DQ9NXH3 145 aa15.57■□□□□ 0.08
SMCO4-201ENST00000298966 H7BYZ3 331 aa15.56■□□□□ 0.08
SMCO4-201ENST00000298966 IGLV2-11P01706 119 aa15.56■□□□□ 0.08
SMCO4-201ENST00000298966 LINC00322Q6ZN03 302 aaPredicted RBP15.56■□□□□ 0.08
SMCO4-201ENST00000298966 TMEM183AQ8IXX5 376 aa15.56■□□□□ 0.08
SMCO4-201ENST00000298966 C15orf54Q8N8G6 183 aa15.56■□□□□ 0.08
SMCO4-201ENST00000298966 ZNF738Q8NE65 137 aa15.56■□□□□ 0.08
SMCO4-201ENST00000298966 NDFIP1Q9BT67 221 aa15.56■□□□□ 0.08
SMCO4-201ENST00000298966 PSG8Q9UQ74 426 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms