RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 SRIP30626 198 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 C8orf49Q96NF6 230 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 PRR25Q96S07 402 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 ASCL2Q99929 193 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 NAV2Q8IVL1 2488 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 TRBV12-3P01733 135 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 HLA-DMBP28068 263 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 FOXA3P55318 350 aaPredicted RBP7.01□□□□□ -1.29
PDPN-201ENST00000294489 SLAQ13239 276 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 DNLZQ5SXM8 178 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 FAM162BQ5T6X4 162 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 CLEC5AQ9NY25 188 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 A0A1W2PS18 150 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 ZNF705FA8MVS1 300 aaPredicted RBP7.01□□□□□ -1.29
PDPN-201ENST00000294489 SERF1AO75920 110 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 PAFAH1B2P68402 229 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 JOSD1Q15040 202 aaPredicted RBP7.01□□□□□ -1.29
PDPN-201ENST00000294489 Q6AWC8 147 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 Q71RC1 249 aaPredicted RBP7.01□□□□□ -1.29
PDPN-201ENST00000294489 COX8CQ7Z4L0 72 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 NPFFR1Q9GZQ6 430 aa7.01□□□□□ -1.29
PDPN-201ENST00000294489 ITPR3Q14573 2671 aa7□□□□□ -1.29
PDPN-201ENST00000294489 RBAKDNA6NC62 111 aa7□□□□□ -1.29
PDPN-201ENST00000294489 A8MWP6 167 aa7□□□□□ -1.29
PDPN-201ENST00000294489 GZMBP10144 247 aa7□□□□□ -1.29
PDPN-201ENST00000294489 ESDP10768 282 aa7□□□□□ -1.29
PDPN-201ENST00000294489 BMI1P35226 326 aa7□□□□□ -1.29
PDPN-201ENST00000294489 CRIP1P50238 77 aa7□□□□□ -1.29
PDPN-201ENST00000294489 C8orf86Q6ZUL3 223 aa7□□□□□ -1.29
PDPN-201ENST00000294489 SIGLECL1Q8N7X8 197 aa7□□□□□ -1.29
PDPN-201ENST00000294489 MRPL53Q96EL3 112 aaKnown RBP7□□□□□ -1.29
PDPN-201ENST00000294489 VGLL1Q99990 258 aa7□□□□□ -1.29
PDPN-201ENST00000294489 TP53TG3Q9ULZ0 132 aa7□□□□□ -1.29
PDPN-201ENST00000294489 MAP1AP78559 2803 aaPredicted RBP7□□□□□ -1.29
PDPN-201ENST00000294489 NUPR1O60356 82 aa7□□□□□ -1.29
PDPN-201ENST00000294489 GDF5OSQ5U4N7 250 aa7□□□□□ -1.29
PDPN-201ENST00000294489 UNQ9165/PRO28630Q6UXU0 137 aa7□□□□□ -1.29
PDPN-201ENST00000294489 RNF182Q8N6D2 247 aa7□□□□□ -1.29
PDPN-201ENST00000294489 BORCS7Q96B45 105 aa7□□□□□ -1.29
PDPN-201ENST00000294489 GCN1Q92616 2671 aaKnown RBP7□□□□□ -1.29
PDPN-201ENST00000294489 CSPG4Q6UVK1 2322 aa6.99□□□□□ -1.29
PDPN-201ENST00000294489 TMEM189A5PLL7 270 aa6.99□□□□□ -1.29
PDPN-201ENST00000294489 SMAD7O15105 426 aaKnown RBP6.99□□□□□ -1.29
PDPN-201ENST00000294489 FOXE3Q13461 319 aa6.99□□□□□ -1.29
PDPN-201ENST00000294489 LCNL1Q6ZST4 164 aa6.99□□□□□ -1.29
PDPN-201ENST00000294489 Q8TAT8 98 aa6.99□□□□□ -1.29
PDPN-201ENST00000294489 GLMPQ8WWB7 406 aa6.99□□□□□ -1.29
PDPN-201ENST00000294489 C16orf92Q96LL3 132 aa6.99□□□□□ -1.29
PDPN-201ENST00000294489 SSBP4Q9BWG4 385 aaPredicted RBP6.99□□□□□ -1.29
PDPN-201ENST00000294489 SAMD10Q9BYL1 202 aa6.99□□□□□ -1.29
PDPN-201ENST00000294489 GSN-AS1Q9NRJ2 163 aa6.99□□□□□ -1.29
PDPN-201ENST00000294489 TEX15Q9BXT5 2789 aa6.99□□□□□ -1.29
PDPN-201ENST00000294489 A0A1B0GUT8 65 aa6.99□□□□□ -1.29
PDPN-201ENST00000294489 HAX1O00165 279 aa6.99□□□□□ -1.29
PDPN-201ENST00000294489 SH2D1AO60880 128 aa6.99□□□□□ -1.29
PDPN-201ENST00000294489 RIGQ13278 110 aa6.99□□□□□ -1.29
PDPN-201ENST00000294489 PEF1Q9UBV8 284 aaKnown RBP6.99□□□□□ -1.29
PDPN-201ENST00000294489 MXRA5Q9NR99 2828 aa6.98□□□□□ -1.29
PDPN-201ENST00000294489 A0A1B0GW15 77 aa6.98□□□□□ -1.29
PDPN-201ENST00000294489 PRAC2D3DTV9 90 aa6.98□□□□□ -1.29
PDPN-201ENST00000294489 F2Z2F3 143 aa6.98□□□□□ -1.29
PDPN-201ENST00000294489 ELANEP08246 267 aa6.98□□□□□ -1.29
PDPN-201ENST00000294489 FAM106AQ4KMX7 169 aa6.98□□□□□ -1.29
PDPN-201ENST00000294489 TRAV8-2A0A0B4J237 113 aa6.98□□□□□ -1.29
PDPN-201ENST00000294489 A0A1B0GV90 55 aa6.98□□□□□ -1.29
PDPN-201ENST00000294489 LINC00310P59036 64 aa6.98□□□□□ -1.29
PDPN-201ENST00000294489 RPS20P60866 119 aaKnown RBP6.98□□□□□ -1.29
PDPN-201ENST00000294489 ERCC8Q13216 396 aa6.98□□□□□ -1.29
PDPN-201ENST00000294489 TMEM78Q5T7P6 136 aa6.98□□□□□ -1.29
PDPN-201ENST00000294489 TPPP3Q9BW30 176 aa6.98□□□□□ -1.29
PDPN-201ENST00000294489 DAZ1Q9NQZ3 744 aaKnown RBP6.98□□□□□ -1.29
PDPN-201ENST00000294489 FABP5P3A8MUU1 101 aa6.97□□□□□ -1.29
PDPN-201ENST00000294489 CDPF1Q6NVV7 123 aa6.97□□□□□ -1.29
PDPN-201ENST00000294489 C18orf32Q8TCD1 76 aa6.97□□□□□ -1.29
PDPN-201ENST00000294489 KCNS1Q96KK3 526 aa6.97□□□□□ -1.29
PDPN-201ENST00000294489 ALKBH7Q9BT30 221 aaPredicted RBP6.97□□□□□ -1.29
PDPN-201ENST00000294489 UNC79Q9P2D8 2635 aa6.97□□□□□ -1.29
PDPN-201ENST00000294489 ANK3Q12955 4377 aaKnown RBP6.97□□□□□ -1.29
PDPN-201ENST00000294489 RPL11P62913 178 aaKnown RBP6.97□□□□□ -1.29
PDPN-201ENST00000294489 IQCJQ1A5X6 159 aa6.97□□□□□ -1.29
PDPN-201ENST00000294489 TMSB15BA0A087X1C1 80 aa6.96□□□□□ -1.29
PDPN-201ENST00000294489 IGHV7-4-1A0A0J9YVY3 117 aa6.96□□□□□ -1.29
PDPN-201ENST00000294489 K7EMT4 169 aa6.96□□□□□ -1.29
PDPN-201ENST00000294489 ARMS2P0C7Q2 107 aa6.96□□□□□ -1.29
PDPN-201ENST00000294489 ZNF138P52744 262 aa6.96□□□□□ -1.29
PDPN-201ENST00000294489 KLF5Q13887 457 aaPredicted RBP6.96□□□□□ -1.29
PDPN-201ENST00000294489 IL17RELQ6ZVW7 336 aa6.96□□□□□ -1.29
PDPN-201ENST00000294489 GPHB5Q86YW7 130 aa6.96□□□□□ -1.29
PDPN-201ENST00000294489 SRSF2Q01130 221 aaKnown RBP6.96□□□□□ -1.3
PDPN-201ENST00000294489 RCHY1Q96PM5 261 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 RHPN1-AS1Q9BWJ2 59 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 AGPAT4-IT1Q9H0P7 198 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 NRN1Q9NPD7 142 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 CREBBPQ92793 2442 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 DNAJC9-AS1A6NH13 148 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 SCGB1D1O95968 90 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 ORM1P02763 201 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 GPX1P07203 203 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 AMTP48728 403 aa6.96□□□□□ -1.3
PDPN-201ENST00000294489 ZNF80P51504 273 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms