RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 RLN2P04090 185 aa17.52■□□□□ 0.4
U2AF1-201ENST00000291552 M6PRP20645 277 aa17.52■□□□□ 0.4
U2AF1-201ENST00000291552 CD300CQ08708 224 aa17.52■□□□□ 0.4
U2AF1-201ENST00000291552 C6orf223Q8N319 242 aa17.52■□□□□ 0.4
U2AF1-201ENST00000291552 C11orf72Q8NBR9 251 aa17.52■□□□□ 0.4
U2AF1-201ENST00000291552 RXFP4Q8TDU9 374 aa17.52■□□□□ 0.4
U2AF1-201ENST00000291552 AGPAT4-IT1Q9H0P7 198 aa17.52■□□□□ 0.4
U2AF1-201ENST00000291552 TMPRSS5Q9H3S3 457 aa17.52■□□□□ 0.4
U2AF1-201ENST00000291552 OR5AC2Q9NZP5 309 aa17.52■□□□□ 0.4
U2AF1-201ENST00000291552 SLC25A5P05141 298 aaKnown RBP17.51■□□□□ 0.39
U2AF1-201ENST00000291552 DAZ2Q13117 558 aaKnown RBP17.51■□□□□ 0.39
U2AF1-201ENST00000291552 BTN1A1Q13410 526 aa17.51■□□□□ 0.39
U2AF1-201ENST00000291552 CLINT1Q14677 625 aa17.51■□□□□ 0.39
U2AF1-201ENST00000291552 MIR17HGQ75NE6 70 aa17.51■□□□□ 0.39
U2AF1-201ENST00000291552 OR5C1Q8NGR4 320 aa17.51■□□□□ 0.39
U2AF1-201ENST00000291552 BLNKQ8WV28 456 aa17.51■□□□□ 0.39
U2AF1-201ENST00000291552 GNPNAT1Q96EK6 184 aaPredicted RBP17.51■□□□□ 0.39
U2AF1-201ENST00000291552 KRTAP1-5Q9BYS1 174 aa17.51■□□□□ 0.39
U2AF1-201ENST00000291552 PRELID1Q9Y255 219 aa17.51■□□□□ 0.39
U2AF1-201ENST00000291552 DNAH5Q8TE73 4624 aa17.5■□□□□ 0.39
U2AF1-201ENST00000291552 ZNF324O75467 553 aaPredicted RBP17.5■□□□□ 0.39
U2AF1-201ENST00000291552 IFITM3Q01628 133 aa17.5■□□□□ 0.39
U2AF1-201ENST00000291552 ZNF503Q96F45 646 aa17.5■□□□□ 0.39
U2AF1-201ENST00000291552 TIMM9Q9Y5J7 89 aa17.5■□□□□ 0.39
U2AF1-201ENST00000291552 APOBP04114 4563 aaKnown RBP17.5■□□□□ 0.39
U2AF1-201ENST00000291552 IGKV2-40A0A087WW87 121 aaPredicted RBP17.49■□□□□ 0.39
U2AF1-201ENST00000291552 IGKV2D-40P01614 121 aaPredicted RBP17.49■□□□□ 0.39
U2AF1-201ENST00000291552 PRR9Q5T870 116 aa17.49■□□□□ 0.39
U2AF1-201ENST00000291552 S100ZQ8WXG8 99 aa17.49■□□□□ 0.39
U2AF1-201ENST00000291552 GSN-AS1Q9NRJ2 163 aa17.49■□□□□ 0.39
U2AF1-201ENST00000291552 CRISP2P16562 243 aa17.48■□□□□ 0.39
U2AF1-201ENST00000291552 ICAM4Q14773 271 aa17.48■□□□□ 0.39
U2AF1-201ENST00000291552 ENKURQ8TC29 256 aa17.48■□□□□ 0.39
U2AF1-201ENST00000291552 LINC00477Q96M19 166 aa17.48■□□□□ 0.39
U2AF1-201ENST00000291552 LINC00467Q9BRT7 94 aa17.48■□□□□ 0.39
U2AF1-201ENST00000291552 NMES1Q9C002 83 aa17.48■□□□□ 0.39
U2AF1-201ENST00000291552 E5RGE8 158 aa17.47■□□□□ 0.39
U2AF1-201ENST00000291552 UPK1BO75841 260 aa17.47■□□□□ 0.39
U2AF1-201ENST00000291552 LRRC37A5PQ49AS3 106 aa17.47■□□□□ 0.39
U2AF1-201ENST00000291552 Q6ZQT7 251 aa17.47■□□□□ 0.39
U2AF1-201ENST00000291552 C9orf47Q6ZRZ4 202 aa17.47■□□□□ 0.39
U2AF1-201ENST00000291552 ZFAND2AQ8N6M9 145 aa17.47■□□□□ 0.39
U2AF1-201ENST00000291552 VGLL1Q99990 258 aa17.47■□□□□ 0.39
U2AF1-201ENST00000291552 RNASE4P34096 147 aaKnown RBP17.46■□□□□ 0.39
U2AF1-201ENST00000291552 ESRGQ1W209 222 aa17.46■□□□□ 0.39
U2AF1-201ENST00000291552 FAM122CQ6P4D5 195 aa17.46■□□□□ 0.39
U2AF1-201ENST00000291552 SLC25A31Q9H0C2 315 aa17.46■□□□□ 0.39
U2AF1-201ENST00000291552 H3BNG1 76 aa17.45■□□□□ 0.38
U2AF1-201ENST00000291552 ANXA2RQ3ZCQ2 193 aa17.45■□□□□ 0.38
U2AF1-201ENST00000291552 EIF4E3Q8N5X7 224 aaKnown RBP17.45■□□□□ 0.38
U2AF1-201ENST00000291552 ZNF680Q8NEM1 530 aa17.45■□□□□ 0.38
U2AF1-201ENST00000291552 FXYD5Q96DB9 178 aa17.45■□□□□ 0.38
U2AF1-201ENST00000291552 PHYHIPLQ96FC7 376 aa17.45■□□□□ 0.38
U2AF1-201ENST00000291552 VSIG2Q96IQ7 327 aa17.45■□□□□ 0.38
U2AF1-201ENST00000291552 WDR61Q9GZS3 305 aaKnown RBP17.45■□□□□ 0.38
U2AF1-201ENST00000291552 Q9H8V8 135 aa17.45■□□□□ 0.38
U2AF1-201ENST00000291552 NBEAP1P0C6P0 100 aa17.44■□□□□ 0.38
U2AF1-201ENST00000291552 C18orf15Q96N68 181 aa17.44■□□□□ 0.38
U2AF1-201ENST00000291552 UPK3BQ9BT76 320 aa17.44■□□□□ 0.38
U2AF1-201ENST00000291552 AAMDCQ9H7C9 122 aa17.44■□□□□ 0.38
U2AF1-201ENST00000291552 KLF12Q9Y4X4 402 aa17.44■□□□□ 0.38
U2AF1-201ENST00000291552 OR10J4P0C629 311 aa17.43■□□□□ 0.38
U2AF1-201ENST00000291552 H2BFSP57053 126 aa17.43■□□□□ 0.38
U2AF1-201ENST00000291552 OR51M1Q9H341 326 aa17.43■□□□□ 0.38
U2AF1-201ENST00000291552 TP53TG3Q9ULZ0 132 aa17.43■□□□□ 0.38
U2AF1-201ENST00000291552 MRPS16Q9Y3D3 137 aaKnown RBP17.43■□□□□ 0.38
U2AF1-201ENST00000291552 TCL1AP56279 114 aa17.42■□□□□ 0.38
U2AF1-201ENST00000291552 PAXXQ9BUH6 204 aa17.42■□□□□ 0.38
U2AF1-201ENST00000291552 MRPL32Q9BYC8 188 aaKnown RBP17.42■□□□□ 0.38
U2AF1-201ENST00000291552 KRTAP4-5Q9BYR2 181 aa17.42■□□□□ 0.38
U2AF1-201ENST00000291552 Q9H3A6 140 aa17.42■□□□□ 0.38
U2AF1-201ENST00000291552 FUT9Q9Y231 359 aa17.42■□□□□ 0.38
U2AF1-201ENST00000291552 TRGV1A0A0A0MS02 117 aa17.41■□□□□ 0.38
U2AF1-201ENST00000291552 INMT-MINDY4F8WBC2 141 aa17.41■□□□□ 0.38
U2AF1-201ENST00000291552 SPINK4O60575 86 aa17.41■□□□□ 0.38
U2AF1-201ENST00000291552 PRAF2O60831 178 aa17.41■□□□□ 0.38
U2AF1-201ENST00000291552 GPX1P07203 203 aa17.41■□□□□ 0.38
U2AF1-201ENST00000291552 NMBP08949 121 aa17.41■□□□□ 0.38
U2AF1-201ENST00000291552 TMEM78Q5T7P6 136 aa17.41■□□□□ 0.38
U2AF1-201ENST00000291552 Q8TAT8 98 aa17.41■□□□□ 0.38
U2AF1-201ENST00000291552 ZNF492Q9P255 531 aa17.41■□□□□ 0.38
U2AF1-201ENST00000291552 TRGV2A0A075B6R0 118 aa17.4■□□□□ 0.38
U2AF1-201ENST00000291552 A0A096LPF7 62 aa17.4■□□□□ 0.38
U2AF1-201ENST00000291552 PPP1R1CQ8WVI7 109 aa17.4■□□□□ 0.38
U2AF1-201ENST00000291552 KCNIP2Q9NS61 270 aa17.4■□□□□ 0.38
U2AF1-201ENST00000291552 C16orf90A8MZG2 172 aa17.39■□□□□ 0.37
U2AF1-201ENST00000291552 ATP5SQ99766 215 aa17.39■□□□□ 0.37
U2AF1-201ENST00000291552 A6NHS1 94 aa17.38■□□□□ 0.37
U2AF1-201ENST00000291552 CYCSP99999 105 aaKnown RBP17.38■□□□□ 0.37
U2AF1-201ENST00000291552 TTC32Q5I0X7 151 aa17.38■□□□□ 0.37
U2AF1-201ENST00000291552 IBA57Q5T440 356 aaKnown RBP17.38■□□□□ 0.37
U2AF1-201ENST00000291552 MARVELD1Q9BSK0 173 aa17.38■□□□□ 0.37
U2AF1-201ENST00000291552 IGHV1OR15-1A0A075B7D0 117 aa17.37■□□□□ 0.37
U2AF1-201ENST00000291552 RGS13O14921 159 aa17.37■□□□□ 0.37
U2AF1-201ENST00000291552 ZNF138P52744 262 aa17.37■□□□□ 0.37
U2AF1-201ENST00000291552 MRPL16Q9NX20 251 aaKnown RBP17.37■□□□□ 0.37
U2AF1-201ENST00000291552 HSPB11Q9Y547 144 aa17.37■□□□□ 0.37
U2AF1-201ENST00000291552 OR7C2O60412 319 aa17.36■□□□□ 0.37
U2AF1-201ENST00000291552 PTTG2Q9NZH5 202 aa17.36■□□□□ 0.37
U2AF1-201ENST00000291552 C17orf112F2Z3M2 114 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms