RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 J3KRW8 73 aa14.31□□□□□ -0.12
TIMP4-201ENST00000287814 CSN1S1P47710 185 aa14.31□□□□□ -0.12
TIMP4-201ENST00000287814 IQCF2Q8IXL9 164 aa14.31□□□□□ -0.12
TIMP4-201ENST00000287814 ODF3Q96PU9 254 aa14.31□□□□□ -0.12
TIMP4-201ENST00000287814 TMEM167BQ9NRX6 74 aa14.31□□□□□ -0.12
TIMP4-201ENST00000287814 C3orf84H3BNL1 204 aa14.3□□□□□ -0.12
TIMP4-201ENST00000287814 GFI1BQ5VTD9 330 aa14.3□□□□□ -0.12
TIMP4-201ENST00000287814 RXFP4Q8TDU9 374 aa14.3□□□□□ -0.12
TIMP4-201ENST00000287814 MAP1LC3B2A6NCE7 125 aa14.3□□□□□ -0.12
TIMP4-201ENST00000287814 UMAD1C9J7I0 102 aa14.3□□□□□ -0.12
TIMP4-201ENST00000287814 GNG5P63218 68 aa14.3□□□□□ -0.12
TIMP4-201ENST00000287814 TMEM208Q9BTX3 173 aa14.3□□□□□ -0.12
TIMP4-201ENST00000287814 MAP1LC3BQ9GZQ8 125 aa14.3□□□□□ -0.12
TIMP4-201ENST00000287814 ZNF492Q9P255 531 aa14.3□□□□□ -0.12
TIMP4-201ENST00000287814 RPH3ALQ9UNE2 315 aa14.3□□□□□ -0.12
TIMP4-201ENST00000287814 SMIM9A6NGZ8 99 aa14.29□□□□□ -0.12
TIMP4-201ENST00000287814 GGTLC3B5MD39 225 aa14.29□□□□□ -0.12
TIMP4-201ENST00000287814 TSPOP30536 169 aa14.29□□□□□ -0.12
TIMP4-201ENST00000287814 CASC10Q5T4H9 136 aa14.29□□□□□ -0.12
TIMP4-201ENST00000287814 TMEM78Q5T7P6 136 aa14.29□□□□□ -0.12
TIMP4-201ENST00000287814 Q8TAT8 98 aa14.29□□□□□ -0.12
TIMP4-201ENST00000287814 CMTM2Q8TAZ6 248 aa14.29□□□□□ -0.12
TIMP4-201ENST00000287814 FAM213BQ8TBF2 198 aa14.29□□□□□ -0.12
TIMP4-201ENST00000287814 STARD9Q9P2P6 4700 aa14.28□□□□□ -0.12
TIMP4-201ENST00000287814 RBAKDNA6NC62 111 aa14.28□□□□□ -0.12
TIMP4-201ENST00000287814 ZNF705GA8MUZ8 300 aaPredicted RBP14.28□□□□□ -0.12
TIMP4-201ENST00000287814 LEPP41159 167 aa14.28□□□□□ -0.12
TIMP4-201ENST00000287814 SUMO1P63165 101 aaKnown RBP14.28□□□□□ -0.12
TIMP4-201ENST00000287814 FAM74A1Q5RGS3 127 aa14.28□□□□□ -0.12
TIMP4-201ENST00000287814 YTHDF2Q9Y5A9 579 aaKnown RBP14.28□□□□□ -0.12
TIMP4-201ENST00000287814 SLC25A5P05141 298 aaKnown RBP14.27□□□□□ -0.12
TIMP4-201ENST00000287814 NANOS2P60321 138 aaKnown RBP14.27□□□□□ -0.12
TIMP4-201ENST00000287814 GOLT1AQ6ZVE7 132 aa14.27□□□□□ -0.12
TIMP4-201ENST00000287814 SLC51BQ86UW2 128 aa14.27□□□□□ -0.12
TIMP4-201ENST00000287814 ZFAND2AQ8N6M9 145 aa14.27□□□□□ -0.12
TIMP4-201ENST00000287814 MBD3L1Q8WWY6 194 aa14.27□□□□□ -0.12
TIMP4-201ENST00000287814 KLLNB2CW77 178 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 HBE1P02100 147 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 CRISP2P16562 243 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 AZU1P20160 251 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 ZNF138P52744 262 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 UBE2G2P60604 165 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 PRR9Q5T870 116 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 C11orf45Q8TAV5 145 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 LINC01587Q99440 93 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 CELA1Q9UNI1 258 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 TRAV12-3A0A0B4J271 114 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 EMP1P54849 157 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 PMS2P11Q13670 270 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 RRN3P1Q2M238 152 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 ARL6IP6Q8N6S5 226 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 SFT2D1Q8WV19 159 aa14.26□□□□□ -0.13
TIMP4-201ENST00000287814 TRAV8-1A0A0A6YYK1 113 aa14.25□□□□□ -0.13
TIMP4-201ENST00000287814 LOC102723971A0A1B0GUV8 181 aa14.25□□□□□ -0.13
TIMP4-201ENST00000287814 A0A1W2PRE2 83 aa14.25□□□□□ -0.13
TIMP4-201ENST00000287814 BTN1A1Q13410 526 aa14.25□□□□□ -0.13
TIMP4-201ENST00000287814 DPPA3Q6W0C5 159 aa14.25□□□□□ -0.13
TIMP4-201ENST00000287814 Q6ZQT7 251 aa14.25□□□□□ -0.13
TIMP4-201ENST00000287814 C5orf17Q8NAS9 161 aa14.25□□□□□ -0.13
TIMP4-201ENST00000287814 A0A1B0GV50 99 aa14.24□□□□□ -0.13
TIMP4-201ENST00000287814 FAM74A7A6NL05 159 aa14.24□□□□□ -0.13
TIMP4-201ENST00000287814 TCRAP04437 139 aa14.24□□□□□ -0.13
TIMP4-201ENST00000287814 HTN1P15515 57 aa14.24□□□□□ -0.13
TIMP4-201ENST00000287814 TMEM256Q8N2U0 113 aa14.24□□□□□ -0.13
TIMP4-201ENST00000287814 EPDR1Q9UM22 224 aa14.24□□□□□ -0.13
TIMP4-201ENST00000287814 ZNF324O75467 553 aaPredicted RBP14.23□□□□□ -0.13
TIMP4-201ENST00000287814 RNASE4P34096 147 aaKnown RBP14.23□□□□□ -0.13
TIMP4-201ENST00000287814 TAS2R60P59551 318 aa14.23□□□□□ -0.13
TIMP4-201ENST00000287814 SGK494Q96LW2 274 aa14.23□□□□□ -0.13
TIMP4-201ENST00000287814 C20orf144Q9BQM9 153 aa14.23□□□□□ -0.13
TIMP4-201ENST00000287814 BOLA1Q9Y3E2 137 aa14.23□□□□□ -0.13
TIMP4-201ENST00000287814 C7orf71A4D174 169 aa14.23□□□□□ -0.13
TIMP4-201ENST00000287814 H7BYZ3 331 aa14.23□□□□□ -0.13
TIMP4-201ENST00000287814 GPX1P07203 203 aa14.23□□□□□ -0.13
TIMP4-201ENST00000287814 NMBP08949 121 aa14.23□□□□□ -0.13
TIMP4-201ENST00000287814 EIF5AL1Q6IS14 154 aaKnown RBP14.23□□□□□ -0.13
TIMP4-201ENST00000287814 TVP23CQ96ET8 276 aa14.23□□□□□ -0.13
TIMP4-201ENST00000287814 PLAC8L1A1L4L8 177 aa14.22□□□□□ -0.13
TIMP4-201ENST00000287814 CXorf65A6NEN9 183 aa14.22□□□□□ -0.13
TIMP4-201ENST00000287814 H2AFB1P0C5Y9 115 aa14.22□□□□□ -0.13
TIMP4-201ENST00000287814 SULT1A2P50226 295 aa14.22□□□□□ -0.13
TIMP4-201ENST00000287814 ZNF767PQ75MW2 155 aa14.22□□□□□ -0.13
TIMP4-201ENST00000287814 TRBV7-9A0A0J9YWB2 115 aa14.21□□□□□ -0.13
TIMP4-201ENST00000287814 TMEM189A5PLL7 270 aa14.21□□□□□ -0.13
TIMP4-201ENST00000287814 IGLV2-11P01706 119 aa14.2□□□□□ -0.14
TIMP4-201ENST00000287814 CCL20P78556 96 aa14.2□□□□□ -0.14
TIMP4-201ENST00000287814 C12orf74Q32Q52 190 aa14.2□□□□□ -0.14
TIMP4-201ENST00000287814 LINC00479Q96M42 142 aa14.2□□□□□ -0.14
TIMP4-201ENST00000287814 NIPSNAP3BQ9BS92 247 aa14.2□□□□□ -0.14
TIMP4-201ENST00000287814 DKK2Q9UBU2 259 aa14.2□□□□□ -0.14
TIMP4-201ENST00000287814 RAB5CP51148 216 aa14.2□□□□□ -0.14
TIMP4-201ENST00000287814 FAM222AQ5U5X8 452 aa14.2□□□□□ -0.14
TIMP4-201ENST00000287814 CCDC28AQ8IWP9 274 aa14.2□□□□□ -0.14
TIMP4-201ENST00000287814 PHLDA1Q8WV24 401 aaPredicted RBP14.2□□□□□ -0.14
TIMP4-201ENST00000287814 LENEPQ9Y5L5 61 aa14.2□□□□□ -0.14
TIMP4-201ENST00000287814 PAGE4O60829 102 aa14.19□□□□□ -0.14
TIMP4-201ENST00000287814 Q6ZTC4 211 aa14.19□□□□□ -0.14
TIMP4-201ENST00000287814 RNASE8Q8TDE3 154 aaKnown RBP14.19□□□□□ -0.14
TIMP4-201ENST00000287814 ATG101Q9BSB4 218 aa14.19□□□□□ -0.14
TIMP4-201ENST00000287814 TENM2Q9NT68 2774 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms