RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 ANKRD39Q53RE8 183 aa10.68□□□□□ -0.7
SMARCA5-201ENST00000283131 STRCP1A6NGW2 1772 aa10.68□□□□□ -0.7
SMARCA5-201ENST00000283131 DSCAML1Q8TD84 2053 aa10.68□□□□□ -0.7
SMARCA5-201ENST00000283131 MSMBP08118 114 aa10.68□□□□□ -0.7
SMARCA5-201ENST00000283131 BPESC1Q9GZL8 116 aa10.68□□□□□ -0.7
SMARCA5-201ENST00000283131 LOC285556D6RIA3 1793 aa10.68□□□□□ -0.7
SMARCA5-201ENST00000283131 ARFGEF1Q9Y6D6 1849 aa10.68□□□□□ -0.7
SMARCA5-201ENST00000283131 TRPM7Q96QT4 1865 aa10.68□□□□□ -0.7
SMARCA5-201ENST00000283131 A0A1B0GTI1 187 aa10.68□□□□□ -0.7
SMARCA5-201ENST00000283131 ETV2O00321 342 aaPredicted RBP10.68□□□□□ -0.7
SMARCA5-201ENST00000283131 NTN3O00634 580 aaPredicted RBP10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 CAMK2N2Q96S95 79 aa10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 WFDC1Q9HC57 220 aa10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 PLXNA1Q9UIW2 1896 aa10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 FOXE3Q13461 319 aa10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 BRK1Q8WUW1 75 aa10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 CACNA1HO95180 2353 aa10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 DLEC1Q9Y238 1755 aa10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 COX7B2Q8TF08 81 aa10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 CSRP1P21291 193 aaKnown RBP10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 SLC25A29Q8N8R3 303 aa10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 HS3ST6Q96QI5 342 aa10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 HERV-K104P63124 156 aa10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 MRPL55Q7Z7F7 128 aaKnown RBP10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 SHANK2-AS3Q9BTD1 123 aa10.67□□□□□ -0.7
SMARCA5-201ENST00000283131 ATOX1O00244 68 aa10.66□□□□□ -0.7
SMARCA5-201ENST00000283131 RNF183Q96D59 192 aa10.66□□□□□ -0.7
SMARCA5-201ENST00000283131 MESP1Q9BRJ9 268 aa10.66□□□□□ -0.7
SMARCA5-201ENST00000283131 MED13LQ71F56 2210 aa10.66□□□□□ -0.7
SMARCA5-201ENST00000283131 UBE2E1P51965 193 aa10.66□□□□□ -0.7
SMARCA5-201ENST00000283131 STRCQ7RTU9 1775 aa10.66□□□□□ -0.7
SMARCA5-201ENST00000283131 SEM1Q6ZVN7 128 aa10.66□□□□□ -0.7
SMARCA5-201ENST00000283131 FNDC10F2Z333 226 aa10.66□□□□□ -0.7
SMARCA5-201ENST00000283131 J3QQQ9 107 aa10.66□□□□□ -0.7
SMARCA5-201ENST00000283131 FANCD2OSQ96PS1 177 aa10.66□□□□□ -0.7
SMARCA5-201ENST00000283131 A0A0J9YY99 117 aa10.66□□□□□ -0.7
SMARCA5-201ENST00000283131 K7EP13 123 aa10.66□□□□□ -0.7
SMARCA5-201ENST00000283131 NCOR1P1Q9H4R4 102 aa10.66□□□□□ -0.7
SMARCA5-201ENST00000283131 PTPRQQ9UMZ3 2332 aa10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 C4orf51C9J302 202 aa10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 PRSS57Q6UWY2 283 aa10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 A0A1B0GW64 132 aa10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 Q96MF0 132 aa10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 FREM1Q5H8C1 2179 aa10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 Q6ZQT7 251 aa10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 SORL1Q92673 2214 aa10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 NBASA2RRP1 2371 aa10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 TNRC6AQ8NDV7 1962 aaKnown RBP10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 C8orf49Q96NF6 230 aa10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 BCORQ6W2J9 1755 aa10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 TMEM213A2RRL7 107 aa10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 F8VRH5 84 aa10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 FOXF2Q12947 444 aa10.65□□□□□ -0.7
SMARCA5-201ENST00000283131 C9JQL5 133 aa10.65□□□□□ -0.71
SMARCA5-201ENST00000283131 LYZL4Q96KX0 146 aa10.64□□□□□ -0.71
SMARCA5-201ENST00000283131 TRAV4A0A0B4J268 109 aa10.64□□□□□ -0.71
SMARCA5-201ENST00000283131 A0A1W2PPM0 123 aa10.64□□□□□ -0.71
SMARCA5-201ENST00000283131 H3BMG7 143 aa10.64□□□□□ -0.71
SMARCA5-201ENST00000283131 NTF4P34130 210 aa10.64□□□□□ -0.71
SMARCA5-201ENST00000283131 TRAV3A0A0B4J244 114 aa10.64□□□□□ -0.71
SMARCA5-201ENST00000283131 Q71RC1 249 aaPredicted RBP10.64□□□□□ -0.71
SMARCA5-201ENST00000283131 PRR15LQ9BU68 103 aa10.64□□□□□ -0.71
SMARCA5-201ENST00000283131 TM2D2Q9BX73 214 aa10.64□□□□□ -0.71
SMARCA5-201ENST00000283131 MED13Q9UHV7 2174 aa10.64□□□□□ -0.71
SMARCA5-201ENST00000283131 B5MCH6 92 aa10.64□□□□□ -0.71
SMARCA5-201ENST00000283131 ZNF134P52741 427 aa10.64□□□□□ -0.71
SMARCA5-201ENST00000283131 SMIM20Q8N5G0 67 aa10.64□□□□□ -0.71
SMARCA5-201ENST00000283131 OPRPNQ99935 248 aaPredicted RBP10.64□□□□□ -0.71
SMARCA5-201ENST00000283131 SHANK3Q9BYB0 1731 aa10.63□□□□□ -0.71
SMARCA5-201ENST00000283131 TAX1BP3O14907 124 aa10.63□□□□□ -0.71
SMARCA5-201ENST00000283131 RNASE13Q5GAN3 156 aaKnown RBP10.63□□□□□ -0.71
SMARCA5-201ENST00000283131 NOP10Q9NPE3 64 aaKnown RBP10.63□□□□□ -0.71
SMARCA5-201ENST00000283131 SS18L2Q9UHA2 77 aa10.63□□□□□ -0.71
SMARCA5-201ENST00000283131 TET1Q8NFU7 2136 aa10.63□□□□□ -0.71
SMARCA5-201ENST00000283131 C8orf86Q6ZUL3 223 aa10.63□□□□□ -0.71
SMARCA5-201ENST00000283131 TGFBR3LH3BV60 316 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 K7EP34 96 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 IGLC2P0DOY2 106 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 IGLC3P0DOY3 106 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 ZNF362Q5T0B9 420 aaPredicted RBP10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 DYNAPQ8N1N2 210 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 Q6ZWC4 215 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 SH2D6Q7Z4S9 175 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 ATP6V0E1O15342 81 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 SP5Q6BEB4 398 aaPredicted RBP10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 NTN5Q8WTR8 489 aaPredicted RBP10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 SIGLEC1Q9BZZ2 1709 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 TRAV26-2A0A0B4J265 109 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 RUSC1-AS1Q66K80 236 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 Q9H8V8 135 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 GLI3P10071 1580 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 FGF16O43320 207 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 ZFP36L1Q07352 338 aaKnown RBP10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 MRPL51Q4U2R6 128 aaKnown RBP10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 DEFB125Q8N687 156 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 IGLV2-23P01705 113 aa10.62□□□□□ -0.71
SMARCA5-201ENST00000283131 EIF4EBP2Q13542 120 aaPredicted RBP10.61□□□□□ -0.71
SMARCA5-201ENST00000283131 NMSQ5H8A3 153 aa10.61□□□□□ -0.71
SMARCA5-201ENST00000283131 LAIR2Q6ISS4 152 aa10.61□□□□□ -0.71
SMARCA5-201ENST00000283131 MRPL53Q96EL3 112 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms