RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 RNASE7Q9H1E1 156 aaKnown RBP8.9□□□□□ -0.98
SSRP1-201ENST00000278412 NAT8Q9UHE5 227 aa8.9□□□□□ -0.98
SSRP1-201ENST00000278412 XKRY2A2RUG3 117 aa8.9□□□□□ -0.98
SSRP1-201ENST00000278412 BRI3O95415 125 aa8.9□□□□□ -0.98
SSRP1-201ENST00000278412 RPEL1Q2QD12 228 aa8.9□□□□□ -0.98
SSRP1-201ENST00000278412 LINC00322Q6ZN03 302 aaPredicted RBP8.9□□□□□ -0.98
SSRP1-201ENST00000278412 KLHL30-AS1Q8NEE0 82 aa8.9□□□□□ -0.98
SSRP1-201ENST00000278412 Q8TAT8 98 aa8.9□□□□□ -0.98
SSRP1-201ENST00000278412 ZNF418Q8TF45 676 aaPredicted RBP8.9□□□□□ -0.98
SSRP1-201ENST00000278412 IGF2BP2-AS1Q96M15 143 aa8.9□□□□□ -0.98
SSRP1-201ENST00000278412 ZNF580Q9UK33 172 aa8.9□□□□□ -0.98
SSRP1-201ENST00000278412 U3KQE9 123 aa8.9□□□□□ -0.98
SSRP1-201ENST00000278412 TMEM213A2RRL7 107 aa8.9□□□□□ -0.99
SSRP1-201ENST00000278412 ZNF785A8K8V0 405 aa8.9□□□□□ -0.99
SSRP1-201ENST00000278412 F6UZH7 168 aa8.9□□□□□ -0.99
SSRP1-201ENST00000278412 CA1P00915 261 aaPredicted RBP8.9□□□□□ -0.99
SSRP1-201ENST00000278412 LGALS1P09382 135 aaKnown RBP8.9□□□□□ -0.99
SSRP1-201ENST00000278412 RPL11P62913 178 aaKnown RBP8.9□□□□□ -0.99
SSRP1-201ENST00000278412 ADAMTSL5Q6ZMM2 481 aa8.9□□□□□ -0.99
SSRP1-201ENST00000278412 OR11H1Q8NG94 326 aa8.9□□□□□ -0.99
SSRP1-201ENST00000278412 WIPF2Q8TF74 440 aaPredicted RBP8.9□□□□□ -0.99
SSRP1-201ENST00000278412 C20orf144Q9BQM9 153 aa8.9□□□□□ -0.99
SSRP1-201ENST00000278412 MIEN1Q9BRT3 115 aa8.9□□□□□ -0.99
SSRP1-201ENST00000278412 TRAV8-2A0A0B4J237 113 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 NDUFA4O00483 81 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 IGLV2-11P01706 119 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 PPBPP02775 128 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 TCRAP04437 139 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 ELANEP08246 267 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 COL5A1-AS1Q5SY13 56 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 STXBP6Q8NFX7 210 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 C20orf173Q96LM9 149 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 RHPN1-AS1Q9BWJ2 59 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 MGST1P10620 155 aaKnown RBP8.89□□□□□ -0.99
SSRP1-201ENST00000278412 TFPI2P48307 235 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 PNRC1Q12796 327 aaPredicted RBP8.89□□□□□ -0.99
SSRP1-201ENST00000278412 ERCC8Q13216 396 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 PRR27Q6MZM9 219 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 GLMPQ8WWB7 406 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 UBE2E2Q96LR5 201 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 PYGO2Q9BRQ0 406 aa8.89□□□□□ -0.99
SSRP1-201ENST00000278412 HSBP1L1C9JCN9 74 aa8.88□□□□□ -0.99
SSRP1-201ENST00000278412 RPL7P18124 248 aaKnown RBP8.88□□□□□ -0.99
SSRP1-201ENST00000278412 WFDC3Q8IUB2 231 aa8.88□□□□□ -0.99
SSRP1-201ENST00000278412 RNF152Q8N8N0 203 aa8.88□□□□□ -0.99
SSRP1-201ENST00000278412 VGLL1Q99990 258 aa8.88□□□□□ -0.99
SSRP1-201ENST00000278412 TMEM160Q9NX00 188 aa8.88□□□□□ -0.99
SSRP1-201ENST00000278412 C20orf202A1L168 122 aa8.88□□□□□ -0.99
SSRP1-201ENST00000278412 FRMD6-AS1P0C7T7 363 aa8.88□□□□□ -0.99
SSRP1-201ENST00000278412 GNG4P50150 75 aa8.88□□□□□ -0.99
SSRP1-201ENST00000278412 Q6ZQT7 251 aa8.88□□□□□ -0.99
SSRP1-201ENST00000278412 TCF24Q7RTU0 167 aa8.88□□□□□ -0.99
SSRP1-201ENST00000278412 NAGKQ9UJ70 344 aa8.88□□□□□ -0.99
SSRP1-201ENST00000278412 F6UB75 175 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 C16orf54Q6UWD8 224 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 SMIM15Q7Z3B0 74 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 PRNTQ86SH4 94 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 TEX29Q8N6K0 151 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 CTDSP1Q9GZU7 261 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 ZNF331Q9NQX6 463 aaPredicted RBP8.87□□□□□ -0.99
SSRP1-201ENST00000278412 CHEK1O14757 476 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 CCL25O15444 150 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 SCGB2A1O75556 95 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 SCGB1D1O95968 90 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 C5orf17Q8NAS9 161 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 SPATA3Q8NHX4 192 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 DLX4Q92988 240 aaPredicted RBP8.87□□□□□ -0.99
SSRP1-201ENST00000278412 RAX2Q96IS3 184 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 C8orf49Q96NF6 230 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 DAZ1Q9NQZ3 744 aaKnown RBP8.87□□□□□ -0.99
SSRP1-201ENST00000278412 OTORQ9NRC9 128 aa8.87□□□□□ -0.99
SSRP1-201ENST00000278412 IGHV7-4-1A0A0J9YVY3 117 aa8.86□□□□□ -0.99
SSRP1-201ENST00000278412 PTTG1IPP53801 180 aa8.86□□□□□ -0.99
SSRP1-201ENST00000278412 FAM3BP58499 235 aaPredicted RBP8.86□□□□□ -0.99
SSRP1-201ENST00000278412 ORAOV1Q8WV07 137 aa8.86□□□□□ -0.99
SSRP1-201ENST00000278412 NUDT10Q8NFP7 164 aa8.86□□□□□ -0.99
SSRP1-201ENST00000278412 WFDC12Q8WWY7 111 aa8.86□□□□□ -0.99
SSRP1-201ENST00000278412 DIRC3C9JPN6 131 aa8.86□□□□□ -0.99
SSRP1-201ENST00000278412 CRLF1O75462 422 aa8.86□□□□□ -0.99
SSRP1-201ENST00000278412 BAGE2Q86Y30 109 aa8.86□□□□□ -0.99
SSRP1-201ENST00000278412 CMTM2Q8TAZ6 248 aa8.86□□□□□ -0.99
SSRP1-201ENST00000278412 SMPXQ9UHP9 88 aa8.86□□□□□ -0.99
SSRP1-201ENST00000278412 RNF114Q9Y508 228 aa8.86□□□□□ -0.99
SSRP1-201ENST00000278412 ARL2-SNX15V9GYD0 113 aa8.86□□□□□ -0.99
SSRP1-201ENST00000278412 CNN1P51911 297 aaKnown RBP8.85□□□□□ -0.99
SSRP1-201ENST00000278412 NSUN5P1Q3KNT7 163 aa8.85□□□□□ -0.99
SSRP1-201ENST00000278412 TXNDC17Q9BRA2 123 aa8.85□□□□□ -0.99
SSRP1-201ENST00000278412 SPINK4O60575 86 aa8.85□□□□□ -0.99
SSRP1-201ENST00000278412 PFN1P07737 140 aaKnown RBP8.85□□□□□ -0.99
SSRP1-201ENST00000278412 TCL1AP56279 114 aa8.85□□□□□ -0.99
SSRP1-201ENST00000278412 LCN12Q6JVE5 192 aa8.85□□□□□ -0.99
SSRP1-201ENST00000278412 OR1N2Q8NGR9 330 aa8.85□□□□□ -0.99
SSRP1-201ENST00000278412 SFRP2Q96HF1 295 aa8.85□□□□□ -0.99
SSRP1-201ENST00000278412 TMEM89A2RUT3 159 aa8.84□□□□□ -0.99
SSRP1-201ENST00000278412 PROK1P58294 105 aa8.84□□□□□ -0.99
SSRP1-201ENST00000278412 UBE2G1P62253 170 aa8.84□□□□□ -0.99
SSRP1-201ENST00000278412 FAM106AQ4KMX7 169 aa8.84□□□□□ -0.99
SSRP1-201ENST00000278412 TEX43Q6ZNM6 134 aa8.84□□□□□ -0.99
SSRP1-201ENST00000278412 Q86TA4 180 aa8.84□□□□□ -0.99
SSRP1-201ENST00000278412 NBEAL2Q6ZNJ1 2754 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms