RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 SAMD13Q5VXD3 122 aa10.11□□□□□ -0.79
COL8A1-202ENST00000273342 SH2D6Q7Z4S9 175 aa10.11□□□□□ -0.79
COL8A1-202ENST00000273342 LINC00311Q8N616 119 aa10.11□□□□□ -0.79
COL8A1-202ENST00000273342 CHAC1Q9BUX1 264 aa10.11□□□□□ -0.79
COL8A1-202ENST00000273342 COL25A1Q9BXS0 654 aaPredicted RBP10.11□□□□□ -0.79
COL8A1-202ENST00000273342 WI2-2373I1.2A0A1W2PRP0 233 aa10.11□□□□□ -0.79
COL8A1-202ENST00000273342 BUB1B-PAK6H3BSN5 160 aa10.11□□□□□ -0.79
COL8A1-202ENST00000273342 LY6HO94772 140 aa10.11□□□□□ -0.79
COL8A1-202ENST00000273342 CRYGBP07316 175 aa10.11□□□□□ -0.79
COL8A1-202ENST00000273342 ZC2HC1BQ5TFG8 222 aa10.11□□□□□ -0.79
COL8A1-202ENST00000273342 ONECUT1Q9UBC0 465 aa10.11□□□□□ -0.79
COL8A1-202ENST00000273342 PTPRQQ9UMZ3 2332 aa10.11□□□□□ -0.79
COL8A1-202ENST00000273342 TRAV26-2A0A0B4J265 109 aa10.1□□□□□ -0.79
COL8A1-202ENST00000273342 C16orf97H3BN30 126 aa10.1□□□□□ -0.79
COL8A1-202ENST00000273342 AZU1P20160 251 aa10.1□□□□□ -0.79
COL8A1-202ENST00000273342 SFTA2Q6UW10 78 aa10.1□□□□□ -0.79
COL8A1-202ENST00000273342 IGFL2Q6UWQ7 119 aa10.1□□□□□ -0.79
COL8A1-202ENST00000273342 ZNF493Q6ZR52 646 aa10.1□□□□□ -0.79
COL8A1-202ENST00000273342 TRAV40A0A0B4J280 105 aa10.1□□□□□ -0.79
COL8A1-202ENST00000273342 SPTBN4Q9H254 2564 aa10.1□□□□□ -0.79
COL8A1-202ENST00000273342 H3BMG7 143 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 SPRY2O43597 315 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 GFRALQ6UXV0 394 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 TMEM158Q8WZ71 300 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 RNASE6Q93091 150 aaKnown RBP10.09□□□□□ -0.79
COL8A1-202ENST00000273342 BSNQ9UPA5 3926 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 A0A1B0GW15 77 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 Q6AWC8 147 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 DEFB104AQ8WTQ1 72 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 PRR25Q96S07 402 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 KLK15Q9H2R5 256 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 TSSC4Q9Y5U2 329 aaPredicted RBP10.09□□□□□ -0.79
COL8A1-202ENST00000273342 TRBV25-1A0A075B6N4 114 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 IGHV3-49A0A0A0MS15 119 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 TMEM8BA6NDV4 472 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 ETDBQ3ZM63 59 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 Q5PR19 223 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 ZNF562Q6V9R5 426 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 RNF182Q8N6D2 247 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 MAP1LC3AQ9H492 121 aa10.09□□□□□ -0.79
COL8A1-202ENST00000273342 A0A0G2JNJ9 132 aa10.08□□□□□ -0.8
COL8A1-202ENST00000273342 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.08□□□□□ -0.8
COL8A1-202ENST00000273342 IGLV1-47P01700 117 aa10.08□□□□□ -0.8
COL8A1-202ENST00000273342 THBDP07204 575 aa10.08□□□□□ -0.8
COL8A1-202ENST00000273342 ODF1Q14990 250 aa10.08□□□□□ -0.8
COL8A1-202ENST00000273342 PRR30Q53SZ7 412 aaPredicted RBP10.08□□□□□ -0.8
COL8A1-202ENST00000273342 OR5A1Q8NGJ0 315 aa10.08□□□□□ -0.8
COL8A1-202ENST00000273342 WFDC12Q8WWY7 111 aa10.08□□□□□ -0.8
COL8A1-202ENST00000273342 ARPC1AQ92747 370 aa10.08□□□□□ -0.8
COL8A1-202ENST00000273342 Q9UFV3 132 aa10.08□□□□□ -0.8
COL8A1-202ENST00000273342 HHLA3Q9XRX5 114 aa10.08□□□□□ -0.8
COL8A1-202ENST00000273342 NCBP2LA6PVI3 153 aaKnown RBP10.08□□□□□ -0.8
COL8A1-202ENST00000273342 TNFRSF6BO95407 300 aa10.08□□□□□ -0.8
COL8A1-202ENST00000273342 PAX8Q06710 450 aa10.08□□□□□ -0.8
COL8A1-202ENST00000273342 KLRD1Q13241 179 aa10.08□□□□□ -0.8
COL8A1-202ENST00000273342 U3KQK5 164 aa10.08□□□□□ -0.8
COL8A1-202ENST00000273342 J3KRW8 73 aa10.07□□□□□ -0.8
COL8A1-202ENST00000273342 MRPS12O15235 138 aaKnown RBP10.07□□□□□ -0.8
COL8A1-202ENST00000273342 NDUFA3O95167 84 aa10.07□□□□□ -0.8
COL8A1-202ENST00000273342 PVRIGQ6DKI7 326 aa10.07□□□□□ -0.8
COL8A1-202ENST00000273342 Q6ZQT7 251 aa10.07□□□□□ -0.8
COL8A1-202ENST00000273342 MAPKAPK5-AS1Q8N8E1 139 aa10.07□□□□□ -0.8
COL8A1-202ENST00000273342 NUP37Q8NFH4 326 aa10.07□□□□□ -0.8
COL8A1-202ENST00000273342 UFC1Q9Y3C8 167 aa10.07□□□□□ -0.8
COL8A1-202ENST00000273342 PRAC2D3DTV9 90 aa10.07□□□□□ -0.8
COL8A1-202ENST00000273342 IGKCP01834 107 aa10.07□□□□□ -0.8
COL8A1-202ENST00000273342 DPF1Q92782 380 aa10.07□□□□□ -0.8
COL8A1-202ENST00000273342 MRPL35Q9NZE8 188 aaKnown RBP10.07□□□□□ -0.8
COL8A1-202ENST00000273342 EFNA4P52798 201 aa10.06□□□□□ -0.8
COL8A1-202ENST00000273342 RNF185Q96GF1 192 aa10.06□□□□□ -0.8
COL8A1-202ENST00000273342 TNFRSF13BO14836 293 aaPredicted RBP10.06□□□□□ -0.8
COL8A1-202ENST00000273342 TRGV3P03979 118 aa10.06□□□□□ -0.8
COL8A1-202ENST00000273342 INSL3P51460 131 aa10.06□□□□□ -0.8
COL8A1-202ENST00000273342 SIVA1O15304 175 aa10.05□□□□□ -0.8
COL8A1-202ENST00000273342 GATD1Q8NB37 220 aa10.05□□□□□ -0.8
COL8A1-202ENST00000273342 CELSR1Q9NYQ6 3014 aa10.05□□□□□ -0.8
COL8A1-202ENST00000273342 E7EQL1 145 aa10.05□□□□□ -0.8
COL8A1-202ENST00000273342 ASCL5Q7RTU5 278 aa10.05□□□□□ -0.8
COL8A1-202ENST00000273342 DYNAPQ8N1N2 210 aa10.04□□□□□ -0.8
COL8A1-202ENST00000273342 LYPD1Q8N2G4 141 aa10.04□□□□□ -0.8
COL8A1-202ENST00000273342 SMIM17P0DL12 118 aa10.04□□□□□ -0.8
COL8A1-202ENST00000273342 ATP5G2Q06055 141 aa10.04□□□□□ -0.8
COL8A1-202ENST00000273342 IL17RELQ6ZVW7 336 aa10.04□□□□□ -0.8
COL8A1-202ENST00000273342 DTX2Q86UW9 622 aa10.04□□□□□ -0.8
COL8A1-202ENST00000273342 ZNF575Q86XF7 245 aa10.04□□□□□ -0.8
COL8A1-202ENST00000273342 ZNF479Q96JC4 524 aa10.04□□□□□ -0.8
COL8A1-202ENST00000273342 HIST1H4GQ99525 98 aa10.04□□□□□ -0.8
COL8A1-202ENST00000273342 TRBV6-1A0A0K0K1D8 114 aa10.04□□□□□ -0.8
COL8A1-202ENST00000273342 C8orf31Q8N9H6 132 aa10.04□□□□□ -0.8
COL8A1-202ENST00000273342 SIGMAR1Q99720 223 aa10.04□□□□□ -0.8
COL8A1-202ENST00000273342 CEND1Q8N111 149 aa10.03□□□□□ -0.8
COL8A1-202ENST00000273342 SMAD5-AS1Q9Y6J3 95 aa10.03□□□□□ -0.8
COL8A1-202ENST00000273342 PRRG2O14669 202 aa10.03□□□□□ -0.8
COL8A1-202ENST00000273342 NBR2O15453 112 aa10.03□□□□□ -0.8
COL8A1-202ENST00000273342 DPM2O94777 84 aa10.03□□□□□ -0.8
COL8A1-202ENST00000273342 MFAP4P55083 255 aa10.03□□□□□ -0.8
COL8A1-202ENST00000273342 NDPQ00604 133 aa10.03□□□□□ -0.8
COL8A1-202ENST00000273342 CFHR4Q92496 578 aa10.03□□□□□ -0.8
COL8A1-202ENST00000273342 FANCD2OSQ96PS1 177 aa10.03□□□□□ -0.8
COL8A1-202ENST00000273342 C21orf62Q9NYP8 219 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms