RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.88□□□□□ -0.35
UBR3-201ENST00000272793 LYNX1G3V0Z9 82 aa12.88□□□□□ -0.35
UBR3-201ENST00000272793 LYNX1P0DP58 116 aa12.88□□□□□ -0.35
UBR3-201ENST00000272793 ZNRF2Q8NHG8 242 aa12.88□□□□□ -0.35
UBR3-201ENST00000272793 LYPD6Q86Y78 171 aa12.88□□□□□ -0.35
UBR3-201ENST00000272793 KLK9Q9UKQ9 250 aa12.88□□□□□ -0.35
UBR3-201ENST00000272793 HOXB4P17483 251 aaPredicted RBP12.88□□□□□ -0.35
UBR3-201ENST00000272793 NDUFA12Q9UI09 145 aa12.87□□□□□ -0.35
UBR3-201ENST00000272793 SHISA3A0PJX4 238 aa12.87□□□□□ -0.35
UBR3-201ENST00000272793 CXCL10P02778 98 aa12.87□□□□□ -0.35
UBR3-201ENST00000272793 ZNF664Q8N3J9 261 aa12.87□□□□□ -0.35
UBR3-201ENST00000272793 IGHV2OR16-5A0A0B4J2B6 119 aa12.87□□□□□ -0.35
UBR3-201ENST00000272793 COX5BP10606 129 aa12.87□□□□□ -0.35
UBR3-201ENST00000272793 SRSF2Q01130 221 aaKnown RBP12.87□□□□□ -0.35
UBR3-201ENST00000272793 USP17L23D6RBM5 183 aa12.86□□□□□ -0.35
UBR3-201ENST00000272793 FNDC10F2Z333 226 aa12.86□□□□□ -0.35
UBR3-201ENST00000272793 NMSQ5H8A3 153 aa12.86□□□□□ -0.35
UBR3-201ENST00000272793 DEFB125Q8N687 156 aa12.86□□□□□ -0.35
UBR3-201ENST00000272793 ZNF501Q96CX3 271 aaPredicted RBP12.86□□□□□ -0.35
UBR3-201ENST00000272793 DEFB131AP59861 70 aa12.86□□□□□ -0.35
UBR3-201ENST00000272793 RETNQ9HD89 108 aa12.86□□□□□ -0.35
UBR3-201ENST00000272793 MGAMO43451 1857 aa12.86□□□□□ -0.35
UBR3-201ENST00000272793 E9PQ18 207 aa12.86□□□□□ -0.35
UBR3-201ENST00000272793 ZNF497Q6ZNH5 498 aa12.86□□□□□ -0.35
UBR3-201ENST00000272793 WFDC1Q9HC57 220 aa12.86□□□□□ -0.35
UBR3-201ENST00000272793 NLRC5Q86WI3 1866 aa12.85□□□□□ -0.35
UBR3-201ENST00000272793 SMIM27A0A1W2PRY6 76 aa12.85□□□□□ -0.35
UBR3-201ENST00000272793 ARMS2P0C7Q2 107 aa12.85□□□□□ -0.35
UBR3-201ENST00000272793 PYY3Q5JQD4 70 aa12.85□□□□□ -0.35
UBR3-201ENST00000272793 GLRX5Q86SX6 157 aa12.85□□□□□ -0.35
UBR3-201ENST00000272793 TM2D2Q9BX73 214 aa12.85□□□□□ -0.35
UBR3-201ENST00000272793 FBLIM1Q8WUP2 373 aa12.85□□□□□ -0.35
UBR3-201ENST00000272793 FAM110DQ8TAY7 271 aaPredicted RBP12.85□□□□□ -0.35
UBR3-201ENST00000272793 TRAV26-2A0A0B4J265 109 aa12.85□□□□□ -0.35
UBR3-201ENST00000272793 SLC25A45Q8N413 288 aa12.85□□□□□ -0.35
UBR3-201ENST00000272793 IGKV1D-13A0A0B4J2D9 117 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 A6NED7 52 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 IGKV1-13P0DP09 117 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 IGFBP3P17936 291 aaPredicted RBP12.84□□□□□ -0.35
UBR3-201ENST00000272793 PAX9P55771 341 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 NPSP0C0P6 89 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 FAM166AQ6J272 317 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 A0A0B4J2C4 111 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 HERVK_113P63121 156 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 TM2D1Q9BX74 207 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 RFNGQ9Y644 331 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 COLCA2A8K830 154 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 IGLC2P0DOY2 106 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 IGLC3P0DOY3 106 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 LINC01590Q5TEZ4 76 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 PRDM6Q9NQX0 595 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 SLC22A18ASQ8N1D0 253 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 C8orf49Q96NF6 230 aa12.84□□□□□ -0.35
UBR3-201ENST00000272793 H3BUX3 64 aa12.83□□□□□ -0.36
UBR3-201ENST00000272793 Q6ZQT7 251 aa12.83□□□□□ -0.36
UBR3-201ENST00000272793 A0A0J9YWU9 116 aa12.83□□□□□ -0.36
UBR3-201ENST00000272793 NUP210LQ5VU65 1888 aa12.83□□□□□ -0.36
UBR3-201ENST00000272793 TRAV3A0A0B4J244 114 aa12.83□□□□□ -0.36
UBR3-201ENST00000272793 SPATA31B1PQ5VZV4 182 aa12.83□□□□□ -0.36
UBR3-201ENST00000272793 USMG5Q96IX5 58 aa12.83□□□□□ -0.36
UBR3-201ENST00000272793 AGMATQ9BSE5 352 aa12.83□□□□□ -0.36
UBR3-201ENST00000272793 K7EP34 96 aa12.83□□□□□ -0.36
UBR3-201ENST00000272793 NTN5Q8WTR8 489 aaPredicted RBP12.83□□□□□ -0.36
UBR3-201ENST00000272793 HERV-K104P63124 156 aa12.82□□□□□ -0.36
UBR3-201ENST00000272793 CYTL1Q9NRR1 136 aa12.82□□□□□ -0.36
UBR3-201ENST00000272793 MRPL27Q9P0M9 148 aaKnown RBP12.82□□□□□ -0.36
UBR3-201ENST00000272793 IGHV1-8P0DP01 117 aa12.82□□□□□ -0.36
UBR3-201ENST00000272793 BRD3OSQ6XYD6 125 aa12.82□□□□□ -0.36
UBR3-201ENST00000272793 IGHMP01871 453 aa12.82□□□□□ -0.36
UBR3-201ENST00000272793 IGHV1-2P23083 117 aa12.82□□□□□ -0.36
UBR3-201ENST00000272793 C1QTNF5Q9BXJ0 243 aa12.82□□□□□ -0.36
UBR3-201ENST00000272793 RNASE6Q93091 150 aaKnown RBP12.82□□□□□ -0.36
UBR3-201ENST00000272793 AMTNQ6UX39 209 aa12.82□□□□□ -0.36
UBR3-201ENST00000272793 IGKV1D-43A0A0B4J1Z2 117 aa12.81□□□□□ -0.36
UBR3-201ENST00000272793 TRGV9Q99603 122 aa12.81□□□□□ -0.36
UBR3-201ENST00000272793 C9orf139Q6ZV77 190 aa12.81□□□□□ -0.36
UBR3-201ENST00000272793 LILRA6Q6PI73 481 aa12.81□□□□□ -0.36
UBR3-201ENST00000272793 IGHV2-26A0A0B4J1V2 119 aa12.81□□□□□ -0.36
UBR3-201ENST00000272793 CENPVL3A0A0U1RRI6 287 aa12.81□□□□□ -0.36
UBR3-201ENST00000272793 FAM240AA0A1B0GVK7 77 aa12.81□□□□□ -0.36
UBR3-201ENST00000272793 FAM223BA6NKX1 122 aa12.81□□□□□ -0.36
UBR3-201ENST00000272793 FAM223AQ8IWN6 122 aa12.81□□□□□ -0.36
UBR3-201ENST00000272793 FAM110AQ9BQ89 295 aa12.81□□□□□ -0.36
UBR3-201ENST00000272793 SERP1Q9Y6X1 66 aa12.81□□□□□ -0.36
UBR3-201ENST00000272793 FAM181AQ8N9Y4 354 aa12.81□□□□□ -0.36
UBR3-201ENST00000272793 IGHV1-24A0A0C4DH33 117 aa12.8□□□□□ -0.36
UBR3-201ENST00000272793 EFNA2O43921 213 aa12.8□□□□□ -0.36
UBR3-201ENST00000272793 COX6A1P12074 109 aa12.8□□□□□ -0.36
UBR3-201ENST00000272793 IGLV2-23P01705 113 aa12.8□□□□□ -0.36
UBR3-201ENST00000272793 CTSGP08311 255 aa12.79□□□□□ -0.36
UBR3-201ENST00000272793 PLA2G2AP14555 144 aa12.79□□□□□ -0.36
UBR3-201ENST00000272793 FBLN5Q9UBX5 448 aa12.79□□□□□ -0.36
UBR3-201ENST00000272793 TRBV19A0A075B6N1 114 aa12.79□□□□□ -0.36
UBR3-201ENST00000272793 A0A1B0GUS0 222 aa12.79□□□□□ -0.36
UBR3-201ENST00000272793 TGFBR3LH3BV60 316 aa12.79□□□□□ -0.36
UBR3-201ENST00000272793 C4orf51C9J302 202 aa12.79□□□□□ -0.36
UBR3-201ENST00000272793 H0YIZ8 118 aa12.79□□□□□ -0.36
UBR3-201ENST00000272793 RFPL3SP0C7P2 107 aa12.79□□□□□ -0.36
UBR3-201ENST00000272793 DYNAPQ8N1N2 210 aa12.79□□□□□ -0.36
UBR3-201ENST00000272793 RHPN1-AS1Q9BWJ2 59 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms