RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 PYYP10082 97 aa12.13□□□□□ -0.47
CSNK1D-201ENST00000269361 ESRGQ1W209 222 aa12.13□□□□□ -0.47
CSNK1D-201ENST00000269361 GCSAMLQ5JQS6 135 aa12.13□□□□□ -0.47
CSNK1D-201ENST00000269361 MZT2BQ6NZ67 158 aa12.13□□□□□ -0.47
CSNK1D-201ENST00000269361 EXOC3-AS1Q8N2X6 119 aa12.13□□□□□ -0.47
CSNK1D-201ENST00000269361 BLNKQ8WV28 456 aa12.13□□□□□ -0.47
CSNK1D-201ENST00000269361 FAM19A4Q96LR4 140 aa12.13□□□□□ -0.47
CSNK1D-201ENST00000269361 LINC00467Q9BRT7 94 aa12.13□□□□□ -0.47
CSNK1D-201ENST00000269361 NPCDR1Q9BY65 106 aa12.13□□□□□ -0.47
CSNK1D-201ENST00000269361 GSN-AS1Q9NRJ2 163 aa12.13□□□□□ -0.47
CSNK1D-201ENST00000269361 ZNF324O75467 553 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-201ENST00000269361 RNASE4P34096 147 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-201ENST00000269361 CD300CQ08708 224 aa12.12□□□□□ -0.47
CSNK1D-201ENST00000269361 C11orf72Q8NBR9 251 aa12.12□□□□□ -0.47
CSNK1D-201ENST00000269361 ZNF680Q8NEM1 530 aa12.12□□□□□ -0.47
CSNK1D-201ENST00000269361 HSPG2P98160 4391 aa12.11□□□□□ -0.47
CSNK1D-201ENST00000269361 TRGV2A0A075B6R0 118 aa12.11□□□□□ -0.47
CSNK1D-201ENST00000269361 NHLH2Q02577 135 aa12.11□□□□□ -0.47
CSNK1D-201ENST00000269361 BTN1A1Q13410 526 aa12.11□□□□□ -0.47
CSNK1D-201ENST00000269361 TTC32Q5I0X7 151 aa12.11□□□□□ -0.47
CSNK1D-201ENST00000269361 C18orf15Q96N68 181 aa12.11□□□□□ -0.47
CSNK1D-201ENST00000269361 UPK3BQ9BT76 320 aa12.11□□□□□ -0.47
CSNK1D-201ENST00000269361 SLC25A2Q9BXI2 301 aa12.11□□□□□ -0.47
CSNK1D-201ENST00000269361 KRTAP1-5Q9BYS1 174 aa12.11□□□□□ -0.47
CSNK1D-201ENST00000269361 Q9H3A6 140 aa12.11□□□□□ -0.47
CSNK1D-201ENST00000269361 AAMDCQ9H7C9 122 aa12.11□□□□□ -0.47
CSNK1D-201ENST00000269361 GPX1P07203 203 aa12.1□□□□□ -0.47
CSNK1D-201ENST00000269361 ASAH1Q13510 395 aa12.1□□□□□ -0.47
CSNK1D-201ENST00000269361 ICAM4Q14773 271 aa12.1□□□□□ -0.47
CSNK1D-201ENST00000269361 ANXA2RQ3ZCQ2 193 aa12.1□□□□□ -0.47
CSNK1D-201ENST00000269361 C9orf47Q6ZRZ4 202 aa12.1□□□□□ -0.47
CSNK1D-201ENST00000269361 LINC00299Q6ZSB3 139 aa12.1□□□□□ -0.47
CSNK1D-201ENST00000269361 EIF4E3Q8N5X7 224 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-201ENST00000269361 OR5C1Q8NGR4 320 aa12.1□□□□□ -0.47
CSNK1D-201ENST00000269361 THAP6Q8TBB0 222 aa12.1□□□□□ -0.47
CSNK1D-201ENST00000269361 FAM167A-AS1Q96KT0 104 aa12.1□□□□□ -0.47
CSNK1D-201ENST00000269361 MRPS16Q9Y3D3 137 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-201ENST00000269361 LRP1BQ9NZR2 4599 aa12.1□□□□□ -0.47
CSNK1D-201ENST00000269361 IGKV2-40A0A087WW87 121 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-201ENST00000269361 TRGV1A0A0A0MS02 117 aa12.09□□□□□ -0.47
CSNK1D-201ENST00000269361 IGKV2D-40P01614 121 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-201ENST00000269361 NMBP08949 121 aa12.09□□□□□ -0.47
CSNK1D-201ENST00000269361 CRISP2P16562 243 aa12.09□□□□□ -0.47
CSNK1D-201ENST00000269361 MIR17HGQ75NE6 70 aa12.09□□□□□ -0.47
CSNK1D-201ENST00000269361 VSIG2Q96IQ7 327 aa12.09□□□□□ -0.47
CSNK1D-201ENST00000269361 KRTAP4-5Q9BYR2 181 aa12.09□□□□□ -0.47
CSNK1D-201ENST00000269361 SLC25A31Q9H0C2 315 aa12.09□□□□□ -0.47
CSNK1D-201ENST00000269361 KLF12Q9Y4X4 402 aa12.09□□□□□ -0.47
CSNK1D-201ENST00000269361 A0A1W2PPQ1 181 aa12.08□□□□□ -0.48
CSNK1D-201ENST00000269361 E5RGE8 158 aa12.08□□□□□ -0.48
CSNK1D-201ENST00000269361 CDK2AP2O75956 126 aa12.08□□□□□ -0.48
CSNK1D-201ENST00000269361 SIX6O95475 246 aa12.08□□□□□ -0.48
CSNK1D-201ENST00000269361 NBEAP1P0C6P0 100 aa12.08□□□□□ -0.48
CSNK1D-201ENST00000269361 TMEM78Q5T7P6 136 aa12.08□□□□□ -0.48
CSNK1D-201ENST00000269361 FAM122CQ6P4D5 195 aa12.08□□□□□ -0.48
CSNK1D-201ENST00000269361 ZFAND2AQ8N6M9 145 aa12.08□□□□□ -0.48
CSNK1D-201ENST00000269361 VGLL1Q99990 258 aa12.08□□□□□ -0.48
CSNK1D-201ENST00000269361 OR51M1Q9H341 326 aa12.08□□□□□ -0.48
CSNK1D-201ENST00000269361 FUT9Q9Y231 359 aa12.08□□□□□ -0.48
CSNK1D-201ENST00000269361 A0A096LPF7 62 aa12.07□□□□□ -0.48
CSNK1D-201ENST00000269361 SPINK4O60575 86 aa12.07□□□□□ -0.48
CSNK1D-201ENST00000269361 TCL1AP56279 114 aa12.07□□□□□ -0.48
CSNK1D-201ENST00000269361 S100ZQ8WXG8 99 aa12.07□□□□□ -0.48
CSNK1D-201ENST00000269361 NMES1Q9C002 83 aa12.07□□□□□ -0.48
CSNK1D-201ENST00000269361 OR5AC2Q9NZP5 309 aa12.07□□□□□ -0.48
CSNK1D-201ENST00000269361 H0YIZ8 118 aa12.06□□□□□ -0.48
CSNK1D-201ENST00000269361 RGS13O14921 159 aa12.06□□□□□ -0.48
CSNK1D-201ENST00000269361 LRRC37A5PQ49AS3 106 aa12.06□□□□□ -0.48
CSNK1D-201ENST00000269361 IBA57Q5T440 356 aaKnown RBP12.06□□□□□ -0.48
CSNK1D-201ENST00000269361 PRR9Q5T870 116 aa12.06□□□□□ -0.48
CSNK1D-201ENST00000269361 ENKURQ8TC29 256 aa12.06□□□□□ -0.48
CSNK1D-201ENST00000269361 FXYD5Q96DB9 178 aa12.06□□□□□ -0.48
CSNK1D-201ENST00000269361 WDR61Q9GZS3 305 aaKnown RBP12.06□□□□□ -0.48
CSNK1D-201ENST00000269361 KCNIP2Q9NS61 270 aa12.06□□□□□ -0.48
CSNK1D-201ENST00000269361 ZNF492Q9P255 531 aa12.06□□□□□ -0.48
CSNK1D-201ENST00000269361 TP53TG3Q9ULZ0 132 aa12.06□□□□□ -0.48
CSNK1D-201ENST00000269361 OR10J4P0C629 311 aa12.05□□□□□ -0.48
CSNK1D-201ENST00000269361 BTF3P20290 206 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-201ENST00000269361 Q6ZQT7 251 aa12.05□□□□□ -0.48
CSNK1D-201ENST00000269361 SPATA12Q7Z6I5 190 aa12.05□□□□□ -0.48
CSNK1D-201ENST00000269361 PAXXQ9BUH6 204 aa12.05□□□□□ -0.48
CSNK1D-201ENST00000269361 MRPL32Q9BYC8 188 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-201ENST00000269361 IGHV1OR15-1A0A075B7D0 117 aa12.04□□□□□ -0.48
CSNK1D-201ENST00000269361 ZNF138P52744 262 aa12.04□□□□□ -0.48
CSNK1D-201ENST00000269361 CYCSP99999 105 aaKnown RBP12.04□□□□□ -0.48
CSNK1D-201ENST00000269361 ST6GAL2Q96JF0 529 aa12.04□□□□□ -0.48
CSNK1D-201ENST00000269361 MUC4Q99102 2169 aa12.03□□□□□ -0.48
CSNK1D-201ENST00000269361 PAX4O43316 350 aa12.03□□□□□ -0.48
CSNK1D-201ENST00000269361 PHYHIPLQ96FC7 376 aa12.03□□□□□ -0.48
CSNK1D-201ENST00000269361 MRPL16Q9NX20 251 aaKnown RBP12.03□□□□□ -0.48
CSNK1D-201ENST00000269361 TRBV7-9A0A0J9YWB2 115 aa12.02□□□□□ -0.49
CSNK1D-201ENST00000269361 C17orf112F2Z3M2 114 aa12.02□□□□□ -0.49
CSNK1D-201ENST00000269361 PRAF2O60831 178 aa12.02□□□□□ -0.49
CSNK1D-201ENST00000269361 UPK1BO75841 260 aa12.02□□□□□ -0.49
CSNK1D-201ENST00000269361 IGHV3-53P01767 116 aa12.02□□□□□ -0.49
CSNK1D-201ENST00000269361 CSN1S1P47710 185 aa12.02□□□□□ -0.49
CSNK1D-201ENST00000269361 RANP62826 216 aaKnown RBP12.02□□□□□ -0.49
CSNK1D-201ENST00000269361 MAPKAPK5-AS1Q8N8E1 139 aa12.02□□□□□ -0.49
CSNK1D-201ENST00000269361 Q8TAT8 98 aa12.02□□□□□ -0.49
CSNK1D-201ENST00000269361 ARPC5LQ9BPX5 153 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms