RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 PPP1R14DQ9NXH3 145 aa11.65□□□□□ -0.54
COPS3-201ENST00000268717 FAM231BA6NCW3 169 aa11.64□□□□□ -0.55
COPS3-201ENST00000268717 P01737 135 aa11.64□□□□□ -0.55
COPS3-201ENST00000268717 HOXD3P31249 432 aaPredicted RBP11.64□□□□□ -0.55
COPS3-201ENST00000268717 KLF5Q13887 457 aaPredicted RBP11.64□□□□□ -0.55
COPS3-201ENST00000268717 COX19Q49B96 90 aa11.64□□□□□ -0.55
COPS3-201ENST00000268717 TCTEX1D4Q5JR98 221 aa11.64□□□□□ -0.55
COPS3-201ENST00000268717 GFRA4Q9GZZ7 299 aa11.64□□□□□ -0.55
COPS3-201ENST00000268717 IGKV2-40A0A087WW87 121 aaPredicted RBP11.64□□□□□ -0.55
COPS3-201ENST00000268717 A0A1B0GUS0 222 aa11.64□□□□□ -0.55
COPS3-201ENST00000268717 LINC01619G3V211 115 aa11.64□□□□□ -0.55
COPS3-201ENST00000268717 PHOX2AO14813 284 aa11.64□□□□□ -0.55
COPS3-201ENST00000268717 IGKV2D-40P01614 121 aaPredicted RBP11.64□□□□□ -0.55
COPS3-201ENST00000268717 TRGC2P03986 189 aa11.64□□□□□ -0.55
COPS3-201ENST00000268717 HLA-DMBP28068 263 aa11.64□□□□□ -0.55
COPS3-201ENST00000268717 ZC2HC1AQ96GY0 325 aa11.64□□□□□ -0.55
COPS3-201ENST00000268717 PRR25Q96S07 402 aa11.64□□□□□ -0.55
COPS3-201ENST00000268717 A8MWL6 223 aa11.63□□□□□ -0.55
COPS3-201ENST00000268717 CT45A10P0DMU9 189 aa11.63□□□□□ -0.55
COPS3-201ENST00000268717 IGFL4Q6B9Z1 124 aa11.63□□□□□ -0.55
COPS3-201ENST00000268717 LINC00322Q6ZN03 302 aaPredicted RBP11.63□□□□□ -0.55
COPS3-201ENST00000268717 RNF182Q8N6D2 247 aa11.63□□□□□ -0.55
COPS3-201ENST00000268717 NDFIP1Q9BT67 221 aa11.63□□□□□ -0.55
COPS3-201ENST00000268717 NAT8BQ9UHF3 227 aa11.63□□□□□ -0.55
COPS3-201ENST00000268717 ZNF705FA8MVS1 300 aaPredicted RBP11.62□□□□□ -0.55
COPS3-201ENST00000268717 ACTL10Q5JWF8 245 aa11.62□□□□□ -0.55
COPS3-201ENST00000268717 RASL11AQ6T310 242 aa11.62□□□□□ -0.55
COPS3-201ENST00000268717 C9orf47Q6ZRZ4 202 aa11.62□□□□□ -0.55
COPS3-201ENST00000268717 VGLL1Q99990 258 aa11.62□□□□□ -0.55
COPS3-201ENST00000268717 LENEPQ9Y5L5 61 aa11.62□□□□□ -0.55
COPS3-201ENST00000268717 IZUMO1RA6ND01 250 aa11.61□□□□□ -0.55
COPS3-201ENST00000268717 SYNJ2BPP57105 145 aa11.61□□□□□ -0.55
COPS3-201ENST00000268717 SHISA2Q6UWI4 295 aa11.61□□□□□ -0.55
COPS3-201ENST00000268717 TCF24Q7RTU0 167 aa11.61□□□□□ -0.55
COPS3-201ENST00000268717 ZFP82Q8N141 532 aa11.61□□□□□ -0.55
COPS3-201ENST00000268717 LINC01006Q8NI28 216 aa11.61□□□□□ -0.55
COPS3-201ENST00000268717 SAV1Q9H4B6 383 aaPredicted RBP11.61□□□□□ -0.55
COPS3-201ENST00000268717 PRAC2D3DTV9 90 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 OVOL1O14753 267 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 ATP5L2Q7Z4Y8 100 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 CMYA5Q8N3K9 4069 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 NBEAL1Q6ZS30 2694 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 C2orf70A6NJV1 201 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 MT-ND6P03923 174 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 S100A6P06703 90 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 ID1P41134 155 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 FOXA3P55318 350 aaPredicted RBP11.6□□□□□ -0.55
COPS3-201ENST00000268717 SMUG1Q53HV7 270 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 FAM162BQ5T6X4 162 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 TMEM78Q5T7P6 136 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 WDR73Q6P4I2 378 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 OR1N2Q8NGR9 330 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 DPF1Q92782 380 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 NEU1Q99519 415 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 GNB1LQ9BYB4 327 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 PEMTQ9UBM1 199 aa11.6□□□□□ -0.55
COPS3-201ENST00000268717 M0QZ24 198 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 HIST1H2BKO60814 126 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 CA1P00915 261 aaPredicted RBP11.59□□□□□ -0.55
COPS3-201ENST00000268717 HIST1H2BJP06899 126 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 PRB4P10163 310 aaPredicted RBP11.59□□□□□ -0.55
COPS3-201ENST00000268717 CBLN1P23435 193 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 HIST1H2BOP23527 126 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 HIST1H2BBP33778 126 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 CRIP1P50238 77 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 ZNF138P52744 262 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 HIST1H2BDP58876 126 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 HIST1H2BCP62807 126 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 HIST2H2BEQ16778 126 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.59□□□□□ -0.55
COPS3-201ENST00000268717 C18orf65Q6ZTR6 163 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 KLHL30-AS1Q8NEE0 82 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 OR11H1Q8NG94 326 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 DCANP1Q8TF63 244 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 HIST1H2BHQ93079 126 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 HIST1H2BNQ99877 126 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 HIST1H2BMQ99879 126 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 RNF114Q9Y508 228 aa11.59□□□□□ -0.55
COPS3-201ENST00000268717 TRBV7-9A0A0J9YWB2 115 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 C5orf52A6NGY3 159 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 HIGD1CA8MV81 97 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 TCL1AP56279 114 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 RPL11P62913 178 aaKnown RBP11.58□□□□□ -0.56
COPS3-201ENST00000268717 FHL3Q13643 280 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 Q6AWC8 147 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 ZNF738Q8NE65 137 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 NUP35Q8NFH5 326 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 FRZBQ92765 325 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 C20orf173Q96LM9 149 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 LINC00477Q96M19 166 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 C8orf49Q96NF6 230 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 AGPAT4-IT1Q9H0P7 198 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 MGAM2Q2M2H8 2515 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 PKD1L1Q8TDX9 2849 aa11.58□□□□□ -0.56
COPS3-201ENST00000268717 TRGC1P0CF51 173 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 PROK1P58294 105 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 KHDC1LQ5JSQ8 128 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 OR2D3Q8NGH3 330 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 Q8TAT8 98 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 TRAPPC1Q9Y5R8 145 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms