RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 CD69Q07108 199 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 Q86TA4 180 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 CD177Q8N6Q3 437 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 RBMXL3Q8N7X1 1067 aaKnown RBP6.92□□□□□ -1.3
VAPB-201ENST00000265619 RTL8AQ9BWD3 113 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 PRNDQ9UKY0 176 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 TRAV40A0A0B4J280 105 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 SPINT2O43291 252 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 NDUFV3P56181 108 aaKnown RBP6.92□□□□□ -1.3
VAPB-201ENST00000265619 LOXL3P58215 753 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 MRPL23Q16540 153 aaKnown RBP6.92□□□□□ -1.3
VAPB-201ENST00000265619 FAM159AQ6UWV7 190 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 TEX29Q8N6K0 151 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 C8orf46Q8TAG6 207 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 MRPL32Q9BYC8 188 aaKnown RBP6.92□□□□□ -1.3
VAPB-201ENST00000265619 ZMAT4Q9H898 229 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 VPREB3Q9UKI3 123 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 TACC2O95359 2948 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 IGHV3-21A0A0B4J1V1 117 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 SAA2P0DJI9 122 aaPredicted RBP6.92□□□□□ -1.3
VAPB-201ENST00000265619 C3orf36Q3SXR2 165 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 MRPL51Q4U2R6 128 aaKnown RBP6.92□□□□□ -1.3
VAPB-201ENST00000265619 C10orf55Q5SWW7 151 aa6.92□□□□□ -1.3
VAPB-201ENST00000265619 TRBV7-3A0A075B6L6 115 aa6.91□□□□□ -1.3
VAPB-201ENST00000265619 TMEM8BA6NDV4 472 aa6.91□□□□□ -1.3
VAPB-201ENST00000265619 GATA4P43694 442 aa6.91□□□□□ -1.3
VAPB-201ENST00000265619 FAM27E3Q08E93 113 aa6.91□□□□□ -1.3
VAPB-201ENST00000265619 LY6DQ14210 128 aa6.91□□□□□ -1.3
VAPB-201ENST00000265619 TBC1D28Q2M2D7 210 aa6.91□□□□□ -1.3
VAPB-201ENST00000265619 GOLT1AQ6ZVE7 132 aa6.91□□□□□ -1.3
VAPB-201ENST00000265619 HIST1H4GQ99525 98 aa6.91□□□□□ -1.3
VAPB-201ENST00000265619 Q9H3A6 140 aa6.91□□□□□ -1.3
VAPB-201ENST00000265619 MPV17P39210 176 aa6.91□□□□□ -1.3
VAPB-201ENST00000265619 FOXC2Q99958 501 aa6.91□□□□□ -1.3
VAPB-201ENST00000265619 TIMM8AO60220 97 aaPredicted RBP6.9□□□□□ -1.3
VAPB-201ENST00000265619 CEACAM4O75871 244 aa6.9□□□□□ -1.3
VAPB-201ENST00000265619 GATA1P15976 413 aaPredicted RBP6.9□□□□□ -1.3
VAPB-201ENST00000265619 PRCDQ00LT1 54 aa6.9□□□□□ -1.3
VAPB-201ENST00000265619 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.9□□□□□ -1.3
VAPB-201ENST00000265619 C17orf77Q96MU5 243 aa6.9□□□□□ -1.3
VAPB-201ENST00000265619 ZNF714Q96N38 554 aa6.9□□□□□ -1.3
VAPB-201ENST00000265619 GAGE12JA6NER3 117 aa6.9□□□□□ -1.3
VAPB-201ENST00000265619 GAGE7O76087 117 aa6.9□□□□□ -1.3
VAPB-201ENST00000265619 GAGE12FP0CL80 117 aa6.9□□□□□ -1.3
VAPB-201ENST00000265619 GAGE12GP0CL81 117 aa6.9□□□□□ -1.3
VAPB-201ENST00000265619 GAGE12IP0CL82 117 aa6.9□□□□□ -1.3
VAPB-201ENST00000265619 GAGE4Q13068 117 aa6.9□□□□□ -1.3
VAPB-201ENST00000265619 RND1Q92730 232 aa6.9□□□□□ -1.3
VAPB-201ENST00000265619 RAX2Q96IS3 184 aa6.9□□□□□ -1.3
VAPB-201ENST00000265619 IGKV3D-15A0A087WSY6 115 aa6.9□□□□□ -1.31
VAPB-201ENST00000265619 LOC107984156A0A0G2JMH3 177 aa6.9□□□□□ -1.31
VAPB-201ENST00000265619 LYZL1Q6UWQ5 148 aa6.9□□□□□ -1.31
VAPB-201ENST00000265619 SLC25A48Q6ZT89 311 aaKnown RBP6.9□□□□□ -1.31
VAPB-201ENST00000265619 ARL17AQ8IVW1 177 aa6.9□□□□□ -1.31
VAPB-201ENST00000265619 C8orf49Q96NF6 230 aa6.9□□□□□ -1.31
VAPB-201ENST00000265619 IGHV3OR15-7A0A075B7D8 119 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 LINC01549A6NIU2 74 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 RHODO00212 210 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 IGKCP01834 107 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 PRSS1P07477 247 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 EVI2AP22794 236 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 KLF17Q5JT82 389 aaPredicted RBP6.89□□□□□ -1.31
VAPB-201ENST00000265619 Q8IYB0 196 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 FMC1Q96HJ9 113 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 MSRB1Q9NZV6 116 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 DSCAMO60469 2012 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 APELAP0DMC3 54 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 CT45A10P0DMU9 189 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 LEPP41159 167 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 C2orf83Q53S99 150 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 DUX4L9Q6RFH8 374 aaPredicted RBP6.89□□□□□ -1.31
VAPB-201ENST00000265619 ANKRD29Q8N6D5 301 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 ATP6V0E2Q8NHE4 81 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 MRPL35Q9NZE8 188 aaKnown RBP6.89□□□□□ -1.31
VAPB-201ENST00000265619 U3KQK5 164 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 H3BVH4 76 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 HLA-DRB4P13762 266 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 GP9P14770 177 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 SRD5A1P18405 259 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 SEC61GP60059 68 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 RIGQ13278 110 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 FAM104BQ5XKR9 115 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 ZCCHC24Q8N2G6 241 aaKnown RBP6.89□□□□□ -1.31
VAPB-201ENST00000265619 ZNRF1Q8ND25 227 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 TMEM133Q9H2Q1 129 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 HLA-DRB4X5D2U9 266 aa6.89□□□□□ -1.31
VAPB-201ENST00000265619 CGB1A6NKQ9 187 aa6.88□□□□□ -1.31
VAPB-201ENST00000265619 MZT1Q08AG7 82 aa6.88□□□□□ -1.31
VAPB-201ENST00000265619 DEFB108BQ8NET1 73 aa6.88□□□□□ -1.31
VAPB-201ENST00000265619 TMEM158Q8WZ71 300 aa6.88□□□□□ -1.31
VAPB-201ENST00000265619 SVEP1Q4LDE5 3571 aa6.88□□□□□ -1.31
VAPB-201ENST00000265619 UPK2O00526 184 aa6.88□□□□□ -1.31
VAPB-201ENST00000265619 SPRY3O43610 288 aa6.88□□□□□ -1.31
VAPB-201ENST00000265619 TCL1BO95988 128 aa6.88□□□□□ -1.31
VAPB-201ENST00000265619 CRIP2P52943 208 aaPredicted RBP6.88□□□□□ -1.31
VAPB-201ENST00000265619 WT1-ASQ06250 92 aa6.88□□□□□ -1.31
VAPB-201ENST00000265619 SPRNQ5BIV9 151 aa6.88□□□□□ -1.31
VAPB-201ENST00000265619 ORMDL3Q8N138 153 aa6.88□□□□□ -1.31
VAPB-201ENST00000265619 GATD1Q8NB37 220 aa6.88□□□□□ -1.31
VAPB-201ENST00000265619 PPDPFLQ8WWR9 84 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms