RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 MBD2Q9UBB5 411 aa11.3□□□□□ -0.6
USE1-201ENST00000263897 C7orf71A4D174 169 aa11.29□□□□□ -0.6
USE1-201ENST00000263897 KLLNB2CW77 178 aa11.29□□□□□ -0.6
USE1-201ENST00000263897 FFAR4Q5NUL3 377 aa11.29□□□□□ -0.6
USE1-201ENST00000263897 FAM122CQ6P4D5 195 aa11.29□□□□□ -0.6
USE1-201ENST00000263897 LINC00612Q8N6U2 182 aa11.29□□□□□ -0.6
USE1-201ENST00000263897 NACAE9PAV3 2078 aa11.29□□□□□ -0.6
USE1-201ENST00000263897 ZNF324O75467 553 aaPredicted RBP11.28□□□□□ -0.6
USE1-201ENST00000263897 CRISP2P16562 243 aa11.28□□□□□ -0.6
USE1-201ENST00000263897 CD300CQ08708 224 aa11.28□□□□□ -0.6
USE1-201ENST00000263897 LINC00336Q6ZUF6 198 aa11.28□□□□□ -0.6
USE1-201ENST00000263897 ZNF503Q96F45 646 aa11.28□□□□□ -0.6
USE1-201ENST00000263897 VGLL1Q99990 258 aa11.28□□□□□ -0.6
USE1-201ENST00000263897 WFDC1Q9HC57 220 aa11.28□□□□□ -0.6
USE1-201ENST00000263897 ALG5Q9Y673 324 aa11.28□□□□□ -0.6
USE1-201ENST00000263897 IGKV2-40A0A087WW87 121 aaPredicted RBP11.27□□□□□ -0.61
USE1-201ENST00000263897 SNURFLB1AK76 121 aa11.27□□□□□ -0.61
USE1-201ENST00000263897 OR7C2O60412 319 aa11.27□□□□□ -0.61
USE1-201ENST00000263897 IGKV2D-40P01614 121 aaPredicted RBP11.27□□□□□ -0.61
USE1-201ENST00000263897 GPX1P07203 203 aa11.27□□□□□ -0.61
USE1-201ENST00000263897 NMBP08949 121 aa11.27□□□□□ -0.61
USE1-201ENST00000263897 RNASE4P34096 147 aaKnown RBP11.27□□□□□ -0.61
USE1-201ENST00000263897 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.61
USE1-201ENST00000263897 Q6ZR54 194 aa11.27□□□□□ -0.61
USE1-201ENST00000263897 LYPD1Q8N2G4 141 aa11.27□□□□□ -0.61
USE1-201ENST00000263897 PHYHIPLQ96FC7 376 aa11.27□□□□□ -0.61
USE1-201ENST00000263897 LINC00467Q9BRT7 94 aa11.27□□□□□ -0.61
USE1-201ENST00000263897 IGLV2-18A0A075B6J9 118 aa11.26□□□□□ -0.61
USE1-201ENST00000263897 NUDT3O95989 172 aa11.26□□□□□ -0.61
USE1-201ENST00000263897 FAM3BP58499 235 aaPredicted RBP11.26□□□□□ -0.61
USE1-201ENST00000263897 RANP62826 216 aaKnown RBP11.26□□□□□ -0.61
USE1-201ENST00000263897 DAZ2Q13117 558 aaKnown RBP11.26□□□□□ -0.61
USE1-201ENST00000263897 ZFAND2AQ8N6M9 145 aa11.26□□□□□ -0.61
USE1-201ENST00000263897 ZNF492Q9P255 531 aa11.26□□□□□ -0.61
USE1-201ENST00000263897 GAGE12BA1L429 117 aa11.25□□□□□ -0.61
USE1-201ENST00000263897 RTL8CO15255 209 aa11.25□□□□□ -0.61
USE1-201ENST00000263897 GAGE7O76087 117 aa11.25□□□□□ -0.61
USE1-201ENST00000263897 PTTG1O95997 202 aa11.25□□□□□ -0.61
USE1-201ENST00000263897 GAGE12FP0CL80 117 aa11.25□□□□□ -0.61
USE1-201ENST00000263897 GAGE12GP0CL81 117 aa11.25□□□□□ -0.61
USE1-201ENST00000263897 GAGE12IP0CL82 117 aa11.25□□□□□ -0.61
USE1-201ENST00000263897 CSN1S1P47710 185 aa11.25□□□□□ -0.61
USE1-201ENST00000263897 TAS2R45P59539 299 aa11.25□□□□□ -0.61
USE1-201ENST00000263897 BTN1A1Q13410 526 aa11.25□□□□□ -0.61
USE1-201ENST00000263897 ANXA2RQ3ZCQ2 193 aa11.25□□□□□ -0.61
USE1-201ENST00000263897 ATG101Q9BSB4 218 aa11.25□□□□□ -0.61
USE1-201ENST00000263897 ZNF138P52744 262 aa11.24□□□□□ -0.61
USE1-201ENST00000263897 UBE2L3P68036 154 aaKnown RBP11.24□□□□□ -0.61
USE1-201ENST00000263897 OR5I1Q13606 314 aa11.24□□□□□ -0.61
USE1-201ENST00000263897 KHDC3LQ587J8 217 aa11.24□□□□□ -0.61
USE1-201ENST00000263897 EIF4E3Q8N5X7 224 aaKnown RBP11.24□□□□□ -0.61
USE1-201ENST00000263897 C11orf72Q8NBR9 251 aa11.24□□□□□ -0.61
USE1-201ENST00000263897 ZNF680Q8NEM1 530 aa11.24□□□□□ -0.61
USE1-201ENST00000263897 Q9H3A6 140 aa11.24□□□□□ -0.61
USE1-201ENST00000263897 GSN-AS1Q9NRJ2 163 aa11.24□□□□□ -0.61
USE1-201ENST00000263897 TRBV7-9A0A0J9YWB2 115 aa11.23□□□□□ -0.61
USE1-201ENST00000263897 RBAKDNA6NC62 111 aa11.23□□□□□ -0.61
USE1-201ENST00000263897 ACOT6Q3I5F7 207 aaPredicted RBP11.23□□□□□ -0.61
USE1-201ENST00000263897 PRR9Q5T870 116 aa11.23□□□□□ -0.61
USE1-201ENST00000263897 Q6ZTI0 123 aa11.23□□□□□ -0.61
USE1-201ENST00000263897 MED28Q9H204 178 aa11.23□□□□□ -0.61
USE1-201ENST00000263897 M6PRP20645 277 aa11.22□□□□□ -0.61
USE1-201ENST00000263897 HOXA5P20719 270 aa11.22□□□□□ -0.61
USE1-201ENST00000263897 CCL18P55774 89 aa11.22□□□□□ -0.61
USE1-201ENST00000263897 RXFP4Q8TDU9 374 aa11.22□□□□□ -0.61
USE1-201ENST00000263897 GNPNAT1Q96EK6 184 aaPredicted RBP11.22□□□□□ -0.61
USE1-201ENST00000263897 TRAV26-1A0A087WT03 109 aa11.21□□□□□ -0.61
USE1-201ENST00000263897 A0A1B0GVY2 172 aa11.21□□□□□ -0.61
USE1-201ENST00000263897 A0A1W2PPV4 95 aa11.21□□□□□ -0.61
USE1-201ENST00000263897 PRSS29PA6NIE9 313 aa11.21□□□□□ -0.61
USE1-201ENST00000263897 RGS13O14921 159 aa11.21□□□□□ -0.61
USE1-201ENST00000263897 EIF3GO75821 320 aaKnown RBP eCLIP11.21□□□□□ -0.61
USE1-201ENST00000263897 PQLC2Q6ZP29 291 aa11.21□□□□□ -0.61
USE1-201ENST00000263897 Q6ZQT7 251 aa11.21□□□□□ -0.61
USE1-201ENST00000263897 Q8TAT8 98 aa11.21□□□□□ -0.61
USE1-201ENST00000263897 C18orf15Q96N68 181 aa11.21□□□□□ -0.61
USE1-201ENST00000263897 KLF12Q9Y4X4 402 aa11.21□□□□□ -0.61
USE1-201ENST00000263897 MUC4Q99102 2169 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 IGHV1OR15-1A0A075B7D0 117 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 A0A0J9YY99 117 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 PGPA6NDG6 321 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 DIRC3C9JPN6 131 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 H3BNG1 76 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 TCL1AP56279 114 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 RAB2AP61019 212 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 IBA57Q5T440 356 aaKnown RBP11.2□□□□□ -0.62
USE1-201ENST00000263897 OR10G4Q8NGN3 311 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 OR10G9Q8NGN4 311 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 OR10G7Q8NGN6 311 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 ZNRF2Q8NHG8 242 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 AQP10Q96PS8 301 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 TMPRSS5Q9H3S3 457 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 TP53TG3Q9ULZ0 132 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 LINC00588Q9Y4M8 146 aa11.2□□□□□ -0.62
USE1-201ENST00000263897 TRGV2A0A075B6R0 118 aa11.19□□□□□ -0.62
USE1-201ENST00000263897 TRGV1A0A0A0MS02 117 aa11.19□□□□□ -0.62
USE1-201ENST00000263897 SPINK4O60575 86 aa11.19□□□□□ -0.62
USE1-201ENST00000263897 ZNF266Q14584 549 aa11.19□□□□□ -0.62
USE1-201ENST00000263897 Q5BKY6 102 aa11.19□□□□□ -0.62
USE1-201ENST00000263897 C1orf134Q5TEV5 83 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms