RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 SH2D6Q7Z4S9 175 aa9.65□□□□□ -0.86
CHMP2B-201ENST00000263780 DTX2Q86UW9 622 aa9.65□□□□□ -0.86
CHMP2B-201ENST00000263780 DYNLRB1Q9NP97 96 aa9.65□□□□□ -0.86
CHMP2B-201ENST00000263780 MSRB1Q9NZV6 116 aa9.65□□□□□ -0.86
CHMP2B-201ENST00000263780 RAB9AP51151 201 aa9.65□□□□□ -0.87
CHMP2B-201ENST00000263780 ICE1Q9Y2F5 2266 aa9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 IGLV2-18A0A075B6J9 118 aa9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 TRAV12-1A0A0B4J245 112 aa9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 NBR2O15453 112 aa9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 DEFB109BQ30KR1 87 aa9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 RNASE6Q93091 150 aaKnown RBP9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 TMEM238LA0A1B0GVL6 79 aa9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 A6NJY4 79 aa9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 H7C1H1 209 aa9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 HOXA3O43365 443 aaPredicted RBP9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 PRB4P10163 310 aaPredicted RBP9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 MAPKAPK5-AS1Q8N8E1 139 aa9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 Q8TAT8 98 aa9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 IGFBPL1Q8WX77 278 aa9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 VCX2Q9H322 139 aa9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 PRO0461Q9UI25 63 aa9.64□□□□□ -0.87
CHMP2B-201ENST00000263780 RBAKDNA6NC62 111 aa9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 OR11H12B2RN74 326 aa9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 APOMO95445 188 aa9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 BSPH1Q075Z2 132 aa9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 OR11H1Q8NG94 326 aa9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 OR11H2Q8NH07 326 aa9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 C21orf62Q9NYP8 219 aa9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 IGLV11-55A0A075B6I3 123 aa9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 TRBV7-3A0A075B6L6 115 aa9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 MYMXA0A1B0GTQ4 84 aa9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 LY6LH3BQJ8 138 aa9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 COX7A1P24310 79 aa9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 LYRM7Q5U5X0 104 aa9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 MRPL16Q9NX20 251 aaKnown RBP9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 CYSLTR1Q9Y271 337 aa9.63□□□□□ -0.87
CHMP2B-201ENST00000263780 PLCE1Q9P212 2302 aa9.62□□□□□ -0.87
CHMP2B-201ENST00000263780 ZNF575Q86XF7 245 aa9.62□□□□□ -0.87
CHMP2B-201ENST00000263780 NPBQ8NG41 125 aa9.62□□□□□ -0.87
CHMP2B-201ENST00000263780 F8VRH5 84 aa9.62□□□□□ -0.87
CHMP2B-201ENST00000263780 TIMM23O14925 209 aa9.62□□□□□ -0.87
CHMP2B-201ENST00000263780 ZNF672Q499Z4 452 aaPredicted RBP9.62□□□□□ -0.87
CHMP2B-201ENST00000263780 IGFL3Q6UXB1 125 aa9.62□□□□□ -0.87
CHMP2B-201ENST00000263780 LCNL1Q6ZST4 164 aa9.62□□□□□ -0.87
CHMP2B-201ENST00000263780 IL17RELQ6ZVW7 336 aa9.62□□□□□ -0.87
CHMP2B-201ENST00000263780 CELSR3Q9NYQ7 3312 aa9.61□□□□□ -0.87
CHMP2B-201ENST00000263780 VPS13AQ96RL7 3174 aa9.61□□□□□ -0.87
CHMP2B-201ENST00000263780 NDUFA3O95167 84 aa9.61□□□□□ -0.87
CHMP2B-201ENST00000263780 GAS8-AS1O95177 125 aa9.61□□□□□ -0.87
CHMP2B-201ENST00000263780 AMTNQ6UX39 209 aa9.61□□□□□ -0.87
CHMP2B-201ENST00000263780 FAM57AQ8TBR7 257 aa9.61□□□□□ -0.87
CHMP2B-201ENST00000263780 DLX4Q92988 240 aaPredicted RBP9.61□□□□□ -0.87
CHMP2B-201ENST00000263780 C1QTNF4Q9BXJ3 329 aa9.61□□□□□ -0.87
CHMP2B-201ENST00000263780 GATA1P15976 413 aaPredicted RBP9.61□□□□□ -0.87
CHMP2B-201ENST00000263780 FOXI1Q12951 378 aa9.61□□□□□ -0.87
CHMP2B-201ENST00000263780 KLRD1Q13241 179 aa9.61□□□□□ -0.87
CHMP2B-201ENST00000263780 FANCD2OSQ96PS1 177 aa9.61□□□□□ -0.87
CHMP2B-201ENST00000263780 PSMG3-AS1Q96PY0 264 aa9.6□□□□□ -0.87
CHMP2B-201ENST00000263780 ABCA1O95477 2261 aa9.6□□□□□ -0.87
CHMP2B-201ENST00000263780 K7EMI3 77 aa9.6□□□□□ -0.87
CHMP2B-201ENST00000263780 ORMDL2Q53FV1 153 aa9.6□□□□□ -0.87
CHMP2B-201ENST00000263780 NRACQ8N912 160 aa9.6□□□□□ -0.87
CHMP2B-201ENST00000263780 DPM3Q9P2X0 92 aa9.6□□□□□ -0.87
CHMP2B-201ENST00000263780 SMAD5-AS1Q9Y6J3 95 aa9.6□□□□□ -0.87
CHMP2B-201ENST00000263780 PRRG2O14669 202 aa9.59□□□□□ -0.87
CHMP2B-201ENST00000263780 IGHG4P01861 327 aa9.59□□□□□ -0.87
CHMP2B-201ENST00000263780 SLC25A16P16260 332 aa9.59□□□□□ -0.87
CHMP2B-201ENST00000263780 C5orf64Q2M2E5 130 aa9.59□□□□□ -0.87
CHMP2B-201ENST00000263780 ZNF418Q8TF45 676 aaPredicted RBP9.59□□□□□ -0.87
CHMP2B-201ENST00000263780 SLC50A1Q9BRV3 221 aa9.59□□□□□ -0.87
CHMP2B-201ENST00000263780 S4R3C0 116 aa9.59□□□□□ -0.87
CHMP2B-201ENST00000263780 C8orf86Q6ZUL3 223 aa9.59□□□□□ -0.87
CHMP2B-201ENST00000263780 DYNAPQ8N1N2 210 aa9.59□□□□□ -0.87
CHMP2B-201ENST00000263780 OR11H6Q8NGC7 330 aa9.59□□□□□ -0.87
CHMP2B-201ENST00000263780 GEMIN7Q9H840 131 aaKnown RBP9.59□□□□□ -0.87
CHMP2B-201ENST00000263780 SVILO95425 2214 aa9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 TECTAO75443 2155 aa9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 MALRD1Q5VYJ5 2156 aa9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 IGHV4-4A0A075B6R2 117 aa9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 F8W735 103 aaPredicted RBP9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 RAXQ9Y2V3 346 aa9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 PPIFP30405 207 aaKnown RBP9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 DLX1P56177 255 aa9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 CFAP126Q5VTH2 177 aa9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 CFHR4Q92496 578 aa9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 CLUHP3Q96NS8 147 aa9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 SCGB3A1Q96QR1 104 aa9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 PRO3102Q9H379 93 aa9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 HIF1ANQ9NWT6 349 aa9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 PGPEP1Q9NXJ5 209 aa9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 SH3BGRL2Q9UJC5 107 aa9.58□□□□□ -0.88
CHMP2B-201ENST00000263780 ATP5G2Q06055 141 aa9.57□□□□□ -0.88
CHMP2B-201ENST00000263780 ERCC8Q13216 396 aa9.57□□□□□ -0.88
CHMP2B-201ENST00000263780 SYT8Q8NBV8 401 aa9.57□□□□□ -0.88
CHMP2B-201ENST00000263780 UFC1Q9Y3C8 167 aa9.57□□□□□ -0.88
CHMP2B-201ENST00000263780 IGKV3D-20A0A0C4DH25 116 aa9.57□□□□□ -0.88
CHMP2B-201ENST00000263780 CTSGP08311 255 aa9.57□□□□□ -0.88
CHMP2B-201ENST00000263780 HLA-DMBP28068 263 aa9.57□□□□□ -0.88
CHMP2B-201ENST00000263780 CRYBA4P53673 196 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms